Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G3092 Cannabis sativa HOM05D006920 ORTHO05D005895 0.0e+00 1755.3 970 100.0
Prupe.7G207100 Prunus persica HOM05D006920 ORTHO05D005895 1.3e-124 451.8 978 40.8
RcHm_v2.0_Chr3g0459471 Rosa chinensis HOM05D006920 ORTHO05D005895 2.0e-104 384.8 1003 36.6
QL02p062309 Quercus lobata HOM05D006920 ORTHO05D005895 7.4e-104 382.9 1039 36.2
Cfa003067 Carpinus fangiana HOM05D006920 ORTHO05D005895 3.3e-96 357.5 1031 36.7
MD15G1209300 Malus domestica HOM05D006920 ORTHO05D005895 2.9e-92 344.4 811 37.7
RcHm_v2.0_Chr2g0093651 Rosa chinensis HOM05D006920 ORTHO05D005895 5.2e-89 333.6 1000 34.1
CiPaw.03G213600 Carya illinoinensis HOM05D006920 ORTHO05D005895 1.3e-84 318.9 1027 35.1
FvH4_1g07770 Fragaria vesca HOM05D006920 ORTHO05D005895 1.7e-84 318.5 984 35.1
FAN26G1238 Fragaria x ananassa HOM05D006920 ORTHO05D005895 6.5e-84 316.6 985 35.4
FAN23G0431 Fragaria x ananassa HOM05D006920 ORTHO05D005895 1.1e-83 315.8 987 36.1
Haze_25928 Corylus avellana HOM05D006920 ORTHO05D005895 2.5e-83 314.7 1029 35.3
FAN26G3372 Fragaria x ananassa HOM05D006920 ORTHO05D005895 2.5e-83 314.7 985 35.6
FAN28G2753 Fragaria x ananassa HOM05D006920 ORTHO05D005895 2.5e-83 314.7 984 35.4
TWI63G0676 Tripterygium wilfordii HOM05D006920 ORTHO05D005895 3.5e-77 294.3 978 34.2
Atru.chr7.1617 Acer truncatum HOM05D006920 ORTHO05D005895 4.4e-72 277.3 1026 33.6
GSVIVG01015184001 Vitis vinifera HOM05D006920 ORTHO05D005895 3.0e-68 264.6 689 40.2
Ciclev10007413m.g Citrus clementina HOM05D006920 ORTHO05D005895 2.3e-65 255.0 988 32.2
Actinidia25244 Actinidia chinensis HOM05D006920 ORTHO05D005895 3.7e-63 247.7 994 32.3
ClCG11G016050 Citrullus lanatus HOM05D006920 ORTHO05D005895 6.0e-61 240.4 1008 32.3
Thecc.09G086800 Theobroma cacao HOM05D006920 ORTHO05D005895 2.5e-59 235.0 1074 30.0
Dinv42334 Davidia involucrata HOM05D006920 ORTHO05D005895 1.7e-55 222.2 617 38.1
Potri.006G148400 Populus trichocarpa HOM05D006920 ORTHO05D005895 6.4e-55 220.3 994 32.3
Sed0019505 Sechium edule HOM05D006920 ORTHO05D005895 4.6e-53 214.2 992 32.4
TAR383G0297 Trochodendron aralioides HOM05D006920 ORTHO05D005895 6.0e-53 213.8 993 29.9
Cc06_g11560 Coffea canephora HOM05D006920 ORTHO05D005895 5.1e-52 210.7 857 31.2
FAN19G0513 Fragaria x ananassa HOM05D006920 ORTHO05D005895 5.1e-52 210.7 713 34.4
TPR.G14423 Trifolium pratense HOM05D006920 ORTHO05D005895 6.6e-52 210.3 805 30.6
Sabra06G0117400 Salix brachista HOM05D006920 ORTHO05D005895 2.5e-51 208.4 887 33.0
CsaV3_4G027920 Cucumis sativus L. HOM05D006920 ORTHO05D005895 2.8e-50 204.9 979 30.9
Medtr5g096500 Medicago truncatula HOM05D006920 ORTHO05D005895 4.7e-50 204.1 967 29.5
Dinv36779 Davidia involucrata HOM05D006920 ORTHO05D005895 4.4e-48 197.6 673 34.3
Gorai.009G032200 Gossypium raimondii HOM05D006920 ORTHO05D005895 4.4e-48 197.6 1084 29.2
Hma1.2p1_0169F.1_g074930 Hydrangea macrophylla HOM05D006920 ORTHO05D005895 1.7e-47 195.7 1016 30.3
Duzib150G1610 Durio zibethinus HOM05D006920 ORTHO05D005895 3.8e-47 194.5 1090 28.0
Eucgr.C01704 Eucalyptus grandis HOM05D006920 ORTHO05D005895 1.3e-44 186.0 496 41.1
Manes.01G178200 Manihot esculenta HOM05D006920 ORTHO05D005895 2.3e-44 185.3 896 30.4
Oeu064585.1 Olea europaea HOM05D006920 ORTHO05D005895 3.9e-44 184.5 991 30.1
MELO3C010521.2 Cucumis melo HOM05D006920 ORTHO05D005895 1.9e-43 182.2 997 28.1
Nn6g35509 Nelumbo nucifera HOM05D006920 ORTHO05D005895 3.3e-43 181.4 1063 29.0
Gohir.A05G030600 Gossypium hirsutum HOM05D006920 ORTHO05D005895 4.3e-43 181.0 964 29.4
Lj6g0023447 Lotus japonicus HOM05D006920 ORTHO05D005895 1.8e-41 175.6 973 29.6
DCAR_031337 Daucus carota HOM05D006920 ORTHO05D005895 4.0e-41 174.5 539 35.8
Rhsim05G0018400 Rhododendron simsii HOM05D006920 ORTHO05D005895 5.8e-40 170.6 918 30.9
Gohir.D05G032000 Gossypium hirsutum HOM05D006920 ORTHO05D005895 7.6e-40 170.2 964 29.5
Psat5g132560 Pisum sativum HOM05D006920 ORTHO05D005895 1.3e-39 169.5 652 35.0
DCAR_015050 Daucus carota HOM05D006920 ORTHO05D005895 2.2e-39 168.7 873 28.8
Nitab4.5_0005104g0050 Nicotiana tabacum HOM05D006920 ORTHO05D005895 3.8e-39 167.9 664 34.0
Oeu000320.3 Olea europaea HOM05D006920 ORTHO05D005895 1.1e-38 166.4 469 33.3
COL.COLO4_18185 Corchorus olitorius HOM05D006920 ORTHO05D005895 7.1e-38 163.7 965 29.1
arahy.Tifrunner.gnm1.ann1.50MPSE Arachis hypogaea HOM05D006920 ORTHO05D005895 7.8e-37 160.2 943 28.8
Ca_12179_v3 Cicer arietinum L. HOM05D006920 ORTHO05D005895 1.0e-36 159.8 948 27.7
MSTRG.19500 Avicennia marina HOM05D006920 ORTHO05D005895 1.7e-36 159.1 993 28.7
Sed0003269 Sechium edule HOM05D006920 ORTHO05D005895 6.6e-36 157.1 1000 28.7
Lj3g0019860 Lotus japonicus HOM05D006920 ORTHO05D005895 1.5e-35 156.0 427 38.9
Nitab4.5_0008077g0010 Nicotiana tabacum HOM05D006920 ORTHO05D005895 1.5e-35 156.0 702 32.5
PGR142G4106 Punica granatum HOM05D006920 ORTHO05D005895 7.3e-35 153.7 986 28.6
vmacro17256 Vaccinium macrocarpon HOM05D006920 ORTHO05D005895 3.6e-34 151.4 1002 26.1
Glyma.14G213000 Glycine max HOM05D006920 ORTHO05D005895 8.1e-34 150.2 616 32.3
arahy.Tifrunner.gnm1.ann1.IGMF9F Arachis hypogaea HOM05D006920 ORTHO05D005895 1.8e-33 149.1 470 38.9
VMungo0331G1985 Vigna mungo HOM05D006920 ORTHO05D005895 4.0e-33 147.9 912 28.4
Phvul.010G094400 Phaseolus vulgaris HOM05D006920 ORTHO05D005895 2.0e-32 145.6 445 36.6
SalBow6G1737 Salvia bowleyana HOM05D006920 ORTHO05D005895 2.0e-32 145.6 805 29.9
Medtr3g053340 Medicago truncatula HOM05D006920 ORTHO05D005895 5.4e-30 137.5 937 26.5
Peaxi162Scf00028g00415 Petunia axillaris HOM05D006920 ORTHO05D005895 1.6e-29 136.0 767 27.0
HPP92_005499 Vanilla planifolia HOM05D006920 ORTHO05D005895 7.9e-29 133.7 768 28.4
Migut.J00581 Erythranthe guttata HOM05D006920 ORTHO05D005895 1.0e-28 133.3 678 30.4
Lj4A292T33 Lonicera japonica HOM05D006920 ORTHO05D005895 3.0e-28 131.7 652 34.0
Hund06669 Selenicereus undatus HOM05D006920 ORTHO05D005895 5.1e-28 131.0 546 32.2
SGA_v2.0_scaffold4G02308 Striga asiatica HOM05D006920 ORTHO05D005895 1.5e-27 129.4 939 27.1
PGSC0003DMG400014565 Solanum tuberosum HOM05D006920 ORTHO05D005895 3.3e-27 128.3 609 31.9
Lalb_Chr25g0278561 Lupinus albus HOM05D006920 ORTHO05D005895 9.6e-27 126.7 572 32.7
HanXRQChr05g0128971 Helianthus annuus HOM05D006920 ORTHO05D005895 1.3e-26 126.3 366 39.1
Hma1.2p1_0476F.1_g160830 Hydrangea macrophylla HOM05D006920 ORTHO05D005895 1.3e-26 126.3 505 33.7
Sc08g0008560 Simmondsia chinensis HOM05D006920 ORTHO05D005895 1.6e-26 125.9 1054 25.0
Sp6g18630 Schrenkiella parvula HOM05D010535 ORTHO05D005895 2.8e-26 125.2 470 31.9
Gohir.A10G064850 Gossypium hirsutum HOM05D006920 ORTHO05D005895 3.7e-26 124.8 413 32.9
AT5G56930 Arabidopsis thaliana HOM05D010535 ORTHO05D005895 1.1e-25 123.2 349 32.7
CAN.G610.81 Capsicum annuum HOM05D006920 ORTHO05D005895 3.1e-25 121.7 545 33.9
HanXRQChr03g0060321 Helianthus annuus HOM05D006920 ORTHO05D005895 6.9e-25 120.6 367 40.1
AL8G32790 Arabidopsis lyrata HOM05D010535 ORTHO05D005895 9.9e-24 116.7 469 30.7
Solyc05g009350.4 Solanum lycopersicum HOM05D006920 ORTHO05D005895 9.9e-24 116.7 452 35.6
CARHR270670 Cardamine hirsuta HOM05D010535 ORTHO05D005895 1.3e-23 116.3 562 33.5
ECA233G4205 Erigeron canadensis HOM05D006920 ORTHO05D005895 1.3e-23 116.3 234 47.0
MBI04_g34755_MAGBIO Magnolia biondii HOM05D006920 ORTHO05D005895 1.4e-22 112.8 762 28.1
AUR62033943 Chenopodium quinoa HOM05D036879 ORTHO05D005895 1.6e-21 109.4 425 29.6
BcaC03g14196 Brassica carinata HOM05D010535 ORTHO05D005895 3.5e-21 108.2 363 32.5
C02p14780 Brassica napus HOM05D010535 ORTHO05D005895 3.5e-21 108.2 363 32.5
BolC2t07607H Brassica oleracea HOM05D010535 ORTHO05D005895 3.5e-21 108.2 363 32.5
Sopen05g005130 Solanum pennellii HOM05D006920 ORTHO05D005895 1.0e-20 106.7 598 30.4
Aa31LG11G5930 Aethionema arabicum HOM05D010535 ORTHO05D005895 1.5e-19 102.8 310 30.3
EL10Ac8g19187 Beta vulgaris HOM05D036879 ORTHO05D005895 1.5e-19 102.8 471 32.5
Carub.0008s1741 Capsella rubella HOM05D010535 ORTHO05D005895 1.5e-19 102.8 348 31.6
Eucgr.C01628 Eucalyptus grandis HOM05D006920 ORTHO05D005895 3.3e-19 101.7 399 29.3
A02p08870 Brassica napus HOM05D010535 ORTHO05D005895 7.4e-19 100.5 463 29.4
unitig_699.g19418 Utricularia gibba HOM05D006920 ORTHO05D005895 1.3e-18 99.8 184 49.5
Thhalv10012834m.g Eutrema salsugineum HOM05D010535 ORTHO05D005895 2.1e-18 99.0 355 31.8
HanXRQChr10g0310341 Helianthus annuus HOM05D001214 ORTHO05D001029 2.8e-18 98.6 110 60.0
BcaB05g22299 Brassica carinata HOM05D010535 ORTHO05D005895 1.4e-17 96.3 514 26.5
PSO063G3291 Papaver somniferum HOM05D006920 ORTHO05D005895 1.4e-17 96.3 228 41.7
CDE04G1224 Ceratophyllum demersum HOM05D006920 ORTHO05D005895 1.8e-17 95.9 214 43.5
CDE06G2477 Ceratophyllum demersum HOM05D002968 ORTHO05D005895 2.4e-17 95.5 212 51.9
PSO832G2112 Papaver somniferum HOM05D006920 ORTHO05D005895 4.0e-17 94.7 217 45.6
Migut.J00579 Erythranthe guttata HOM05D006920 ORTHO05D005895 1.4e-14 86.3 84 69.0
BraA02t05956Z Brassica rapa HOM05D010535 ORTHO05D005895 1.9e-14 85.9 545 26.1
CSS0039023 Camellia sinensis var. sinensis HOM05D041308 ORTHO05D005895 3.2e-14 85.1 484 27.1
ATR0178G033 Amborella trichopoda HOM05D006920 ORTHO05D005895 4.2e-14 84.7 343 30.0
CSS0014816 Camellia sinensis var. sinensis HOM05D041308 ORTHO05D005895 1.6e-13 82.8 486 26.3
Aa31LG11G5970 Aethionema arabicum HOM05D010535 ORTHO05D005895 2.7e-13 82.0 195 31.8
Cpa.g.sc28.161 Carica papaya HOM05D006920 ORTHO05D005895 6.0e-13 80.9 313 30.0
CSS0019085 Camellia sinensis var. sinensis HOM05D041308 ORTHO05D005895 7.9e-13 80.5 463 26.6
Ah.12g064230 Amaranthus hybridus HOM05D006920 ORTHO05D005895 1.0e-12 80.1 52 67.3
CSS0016721 Camellia sinensis var. sinensis HOM05D037884 ORTHO05D005895 1.8e-12 79.3 380 28.9
CSS0038644 Camellia sinensis var. sinensis HOM05D037884 ORTHO05D005895 1.8e-12 79.3 380 28.9
CSS0027095 Camellia sinensis var. sinensis HOM05D037884 ORTHO05D005895 2.3e-12 79.0 334 30.2
ECA240G4801 Erigeron canadensis HOM05D006920 ORTHO05D005895 3.0e-12 78.6 47 68.1
Aqoxy7G02156 Aquilegia oxysepala HOM05D006920 ORTHO05D005895 3.9e-12 78.2 426 30.8
SEGI_28908 Sequoiadendron giganteum HOM05D006920 ORTHO05D005895 6.7e-12 77.4 154 43.5
Lsat_1_v5_gn_7_36681 Lactuca sativa HOM05D006920 ORTHO05D005895 1.9e-11 75.9 369 29.3
Zm00001eb160100 Zea mays HOM05D006920 ORTHO05D005895 5.7e-11 74.3 266 35.3
PSO384G1468 Papaver somniferum HOM05D006920 ORTHO05D005895 9.7e-11 73.6 724 25.6
Glyma.18G092000 Glycine max HOM05D006920 ORTHO05D005895 2.2e-10 72.4 347 29.1
Pp3c19_22680 Physcomitrium patens HOM05D006920 ORTHO05D005895 1.1e-09 70.1 314 32.5
HanXRQChr14g0436791 Helianthus annuus HOM05D006920 ORTHO05D005895 2.4e-09 68.9 58 51.7
Dinv42333 Davidia involucrata HOM05D006920 ORTHO05D005895 4.1e-09 68.2 69 50.7
Mapoly0131s0021 Marchantia polymorpha HOM05D006920 ORTHO05D005895 4.1e-09 68.2 207 33.3
AUR62029046 Chenopodium quinoa HOM05D036879 ORTHO05D005895 1.5e-08 66.2 358 28.2
A10p14250 Brassica napus HOM05D010535 ORTHO05D005895 2.2e-07 62.4 49 57.1
BraA10t43516Z Brassica rapa HOM05D010535 ORTHO05D005895 2.2e-07 62.4 49 57.1
AagrBONN_evm.TU.Sc2ySwM_228.2245 Anthoceros agrestis HOM05D006920 ORTHO05D005895 8.5e-07 60.5 153 37.9


User provided reference genes

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