Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G2492 Cannabis sativa HOM05D006316 ORTHO05D008032 5.9e-135 484.2 242 100.0
VMungo1215G0091 Vigna mungo HOM05D006316 ORTHO05D008032 2.0e-106 389.4 243 80.2
QL06p014723 Quercus lobata HOM05D006316 ORTHO05D008032 2.6e-106 389.0 242 80.6
GSVIVG01017710001 Vitis vinifera HOM05D006316 ORTHO05D008032 2.6e-106 389.0 229 82.1
CiPaw.01G127100 Carya illinoinensis HOM05D006316 ORTHO05D008032 5.8e-106 387.9 243 79.8
Glyma.13G117200 Glycine max HOM05D006316 ORTHO05D008032 5.8e-106 387.9 243 79.8
arahy.Tifrunner.gnm1.ann1.NEV66G Arachis hypogaea HOM05D006316 ORTHO05D008032 1.7e-105 386.3 243 78.6
arahy.Tifrunner.gnm1.ann1.ZN6V8N Arachis hypogaea HOM05D006316 ORTHO05D008032 1.7e-105 386.3 243 78.6
CsaV3_3G015610 Cucumis sativus L. HOM05D006316 ORTHO05D008032 2.2e-105 386.0 243 78.6
PGR031G3724 Punica granatum HOM05D006316 ORTHO05D008032 3.7e-105 385.2 230 82.2
MELO3C006760.2 Cucumis melo HOM05D006316 ORTHO05D008032 8.3e-105 384.0 243 78.2
Phvul.003G124500 Phaseolus vulgaris HOM05D006316 ORTHO05D008032 1.4e-104 383.3 243 78.6
Lj4g0011706 Lotus japonicus HOM05D006316 ORTHO05D008032 1.9e-104 382.9 243 79.4
Medtr4g124260 Medicago truncatula HOM05D006316 ORTHO05D008032 1.9e-104 382.9 243 77.8
TWI74G1230 Tripterygium wilfordii HOM05D006316 ORTHO05D008032 4.1e-104 381.7 230 81.7
Sed0018318 Sechium edule HOM05D006316 ORTHO05D008032 7.1e-104 380.9 243 77.0
Haze_00749 Corylus avellana HOM05D006316 ORTHO05D008032 9.2e-104 380.6 222 83.8
ClCG05G006940 Citrullus lanatus HOM05D006316 ORTHO05D008032 2.7e-103 379.0 255 74.9
Manes.05G122900 Manihot esculenta HOM05D006316 ORTHO05D008032 2.7e-103 379.0 230 81.3
Cc07_g19930 Coffea canephora HOM05D006316 ORTHO05D008032 4.6e-103 378.3 237 77.6
Lalb_Chr12g0200491 Lupinus albus HOM05D006316 ORTHO05D008032 7.8e-103 377.5 249 77.1
MD13G1137100 Malus domestica HOM05D006316 ORTHO05D008032 1.0e-102 377.1 243 77.4
Actinidia24554 Actinidia chinensis HOM05D006316 ORTHO05D008032 1.3e-102 376.7 233 78.1
CSS0037556 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 1.3e-102 376.7 229 79.9
CSS0049495 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 3.0e-102 375.6 229 79.9
CARHR092900 Cardamine hirsuta HOM05D006316 ORTHO05D008032 3.0e-102 375.6 243 75.7
Nn4g25293 Nelumbo nucifera HOM05D006316 ORTHO05D008032 8.6e-102 374.0 230 78.7
DCAR_002560 Daucus carota HOM05D006316 ORTHO05D008032 1.5e-101 373.2 241 75.1
Lsat_1_v5_gn_6_117760 Lactuca sativa HOM05D006316 ORTHO05D008032 1.5e-101 373.2 231 78.8
Thhalv10021423m.g Eutrema salsugineum HOM05D006316 ORTHO05D008032 1.9e-101 372.9 243 74.1
Sp3g15720 Schrenkiella parvula HOM05D006316 ORTHO05D008032 1.9e-101 372.9 243 75.3
AT3G17590 Arabidopsis thaliana HOM05D006316 ORTHO05D008032 5.6e-101 371.3 243 74.5
Lj6A704G50 Lonicera japonica HOM05D006316 ORTHO05D008032 7.3e-101 370.9 237 75.9
SalBow7G1663 Salvia bowleyana HOM05D006316 ORTHO05D008032 9.5e-101 370.5 243 74.9
Carub.0003s1730 Capsella rubella HOM05D006316 ORTHO05D008032 1.2e-100 370.2 243 75.3
TPR.G12708 Trifolium pratense HOM05D006316 ORTHO05D008032 1.2e-100 370.2 224 80.8
AL3G30660 Arabidopsis lyrata HOM05D006316 ORTHO05D008032 1.6e-100 369.8 243 74.1
Aa31LG8G4460 Aethionema arabicum HOM05D006316 ORTHO05D008032 2.1e-100 369.4 243 73.7
CAN.G255.2 Capsicum annuum HOM05D006316 ORTHO05D008032 2.1e-100 369.4 243 74.9
Eucgr.B02199 Eucalyptus grandis HOM05D006316 ORTHO05D008032 4.7e-100 368.2 230 77.0
BcaB06g25834 Brassica carinata HOM05D006316 ORTHO05D008032 1.1e-99 367.1 243 73.7
Potri.010G004100 Populus trichocarpa HOM05D006316 ORTHO05D008032 1.1e-99 367.1 230 77.4
Migut.B00749 Erythranthe guttata HOM05D006316 ORTHO05D008032 1.4e-99 366.7 243 74.5
MSTRG.20325 Avicennia marina HOM05D006316 ORTHO05D008032 3.1e-99 365.5 230 76.5
A05p32260 Brassica napus HOM05D006316 ORTHO05D008032 8.9e-99 364.0 230 76.1
Duzib128G0584 Durio zibethinus HOM05D006316 ORTHO05D008032 1.2e-98 363.6 243 72.8
C05p48790 Brassica napus HOM05D006316 ORTHO05D008032 2.0e-98 362.8 243 72.4
BolC5t33616H Brassica oleracea HOM05D006316 ORTHO05D008032 2.0e-98 362.8 243 72.4
BraA05t22055Z Brassica rapa HOM05D006316 ORTHO05D008032 2.6e-98 362.5 230 75.7
HanXRQChr05g0148931 Helianthus annuus HOM05D006316 ORTHO05D008032 3.4e-98 362.1 231 77.5
BcaC05g28772 Brassica carinata HOM05D006316 ORTHO05D008032 4.4e-98 361.7 243 72.4
Gohir.D05G000900 Gossypium hirsutum HOM05D006316 ORTHO05D008032 4.4e-98 361.7 243 71.6
Gorai.009G000800 Gossypium raimondii HOM05D006316 ORTHO05D008032 4.4e-98 361.7 243 71.6
Peaxi162Scf00571g00412 Petunia axillaris HOM05D006316 ORTHO05D008032 4.4e-98 361.7 243 73.7
TAR365G1184 Trochodendron aralioides HOM05D006316 ORTHO05D008032 9.9e-98 360.5 254 71.7
Aqoxy2G02444 Aquilegia oxysepala HOM05D006316 ORTHO05D008032 1.7e-97 359.8 242 70.7
Nitab4.5_0000051g0260 Nicotiana tabacum HOM05D006316 ORTHO05D008032 1.7e-97 359.8 242 74.8
Gohir.A05G000600 Gossypium hirsutum HOM05D006316 ORTHO05D008032 2.2e-97 359.4 243 71.2
Ciclev10005749m.g Citrus clementina HOM05D006316 ORTHO05D008032 8.3e-97 357.5 230 76.1
Hund12266 Selenicereus undatus HOM05D006316 ORTHO05D008032 8.3e-97 357.5 243 73.3
vmacro04190 Vaccinium macrocarpon HOM05D006316 ORTHO05D008032 1.4e-96 356.7 259 69.9
Atru.chr4.3188 Acer truncatum HOM05D006316 ORTHO05D008032 1.9e-96 356.3 230 75.2
SGA_v2.0_scaffold131G34373 Striga asiatica HOM05D006316 ORTHO05D008032 2.4e-96 355.9 273 67.4
PSO210G4075 Papaver somniferum HOM05D006316 ORTHO05D008032 3.2e-96 355.5 241 71.4
PSO761G0163 Papaver somniferum HOM05D006316 ORTHO05D008032 3.2e-96 355.5 241 71.4
Nitab4.5_0004737g0050 Nicotiana tabacum HOM05D006316 ORTHO05D008032 4.1e-96 355.1 242 73.6
FvH4_4g21770 Fragaria vesca HOM05D006316 ORTHO05D008032 5.4e-96 354.8 243 72.8
Ah.07g202850 Amaranthus hybridus HOM05D006316 ORTHO05D008032 9.2e-96 354.0 243 71.2
AUR62002525 Chenopodium quinoa HOM05D006316 ORTHO05D008032 9.2e-96 354.0 243 71.6
FAN17G2953 Fragaria x ananassa HOM05D006316 ORTHO05D008032 1.6e-95 353.2 243 72.4
RcHm_v2.0_Chr4g0428001 Rosa chinensis HOM05D006316 ORTHO05D008032 2.1e-95 352.8 243 72.0
ECA246G2315 Erigeron canadensis HOM05D006316 ORTHO05D008032 2.7e-95 352.4 228 76.8
Psat4g020720 Pisum sativum HOM05D006316 ORTHO05D008032 2.7e-95 352.4 243 73.7
Sopen11g008410 Solanum pennellii HOM05D006316 ORTHO05D008032 6.0e-95 351.3 243 73.7
EL10Ac3g06220 Beta vulgaris HOM05D006316 ORTHO05D008032 1.0e-94 350.5 243 70.4
COL.COLO4_13438 Corchorus olitorius HOM05D006316 ORTHO05D008032 3.0e-94 349.0 243 70.8
Gohir.A09G135800 Gossypium hirsutum HOM05D006316 ORTHO05D008032 3.0e-94 349.0 240 69.6
unitig_578.g15959 Utricularia gibba HOM05D006316 ORTHO05D008032 1.1e-93 347.1 248 70.2
FAN12G0215 Fragaria x ananassa HOM05D006316 ORTHO05D008032 3.6e-92 342.0 265 66.8
Gohir.D09G137500 Gossypium hirsutum HOM05D006316 ORTHO05D008032 8.1e-92 340.9 263 65.0
FAN07G2419 Fragaria x ananassa HOM05D006316 ORTHO05D008032 1.2e-90 337.0 274 64.2
ATR0796G033 Amborella trichopoda HOM05D006316 ORTHO05D008032 3.4e-90 335.5 230 68.3
CDE12G0513 Ceratophyllum demersum HOM05D006316 ORTHO05D008032 4.4e-90 335.1 237 66.7
Sabra10G0003500 Salix brachista HOM05D006316 ORTHO05D008032 7.6e-90 334.3 271 64.2
Cfa015754 Carpinus fangiana HOM05D006316 ORTHO05D008032 1.9e-88 329.7 211 77.3
CSS0010190 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 3.2e-88 328.9 225 73.8
THA.LOC104826519 Tarenaya hassleriana HOM05D006316 ORTHO05D008032 7.8e-87 324.3 212 75.5
Thecc.03G258800 Theobroma cacao HOM05D006316 ORTHO05D008032 1.7e-86 323.2 243 66.7
Sopen11g008420 Solanum pennellii HOM05D006316 ORTHO05D008032 8.7e-86 320.9 243 67.5
Prupe.1G208100 Prunus persica HOM05D006316 ORTHO05D008032 3.3e-85 318.9 196 80.6
TAR362G1307 Trochodendron aralioides HOM05D006316 ORTHO05D008032 1.1e-77 293.9 191 75.9
Gorai.006G157900 Gossypium raimondii HOM05D006316 ORTHO05D008032 7.3e-77 291.2 234 63.2
Rhsim13G0235700 Rhododendron simsii HOM05D006316 ORTHO05D008032 1.3e-76 290.4 272 58.5
Solyc11g013400.3 Solanum lycopersicum HOM05D006316 ORTHO05D008032 1.6e-76 290.0 196 75.5
Zm00001eb354530 Zea mays HOM05D006316 ORTHO05D008032 4.8e-76 288.5 240 60.0
Dinv32178 Davidia involucrata HOM05D006316 ORTHO05D008032 1.2e-74 283.9 239 64.0
Os02g0723700 Oryza sativa ssp. japonica HOM05D006316 ORTHO05D008032 1.2e-74 283.9 227 61.7
Mapoly0059s0054 Marchantia polymorpha HOM05D006316 ORTHO05D008032 1.3e-70 270.4 235 57.0
SHI09041 Sapria himalayana HOM05D006316 ORTHO05D008032 3.3e-69 265.8 192 67.7
Rhsim04G0168500 Rhododendron simsii HOM05D006316 ORTHO05D008032 8.1e-68 261.2 194 67.0
Sc19g0002500 Simmondsia chinensis HOM05D006316 ORTHO05D008032 8.1e-68 261.2 179 73.7
AUR62023666 Chenopodium quinoa HOM05D006316 ORTHO05D008032 1.2e-66 257.3 308 48.4
SMO358G0571 Selaginella moellendorffii HOM05D006316 ORTHO05D008032 3.4e-66 255.8 227 56.4
AagrBONN_evm.TU.Sc2ySwM_228.3212 Anthoceros agrestis HOM05D006316 ORTHO05D008032 4.3e-61 238.8 226 53.5
Lj2g0021665 Lotus japonicus HOM05D006316 ORTHO05D008032 2.1e-60 236.5 230 57.8
Rhsim04G0168300 Rhododendron simsii HOM05D006316 ORTHO05D008032 1.3e-57 227.3 193 61.1
LjContig00575g0004232 Lotus japonicus HOM05D006316 ORTHO05D008032 5.0e-57 225.3 174 66.7
LjContig00576g0014419 Lotus japonicus HOM05D006316 ORTHO05D008032 5.0e-57 225.3 174 66.7
HPP92_002633 Vanilla planifolia HOM05D006316 ORTHO05D008032 2.5e-56 223.0 148 69.6
Lj2g0021371 Lotus japonicus HOM05D006316 ORTHO05D008032 1.6e-55 220.3 194 60.3
CBR_g38190 Chara braunii HOM05D006316 ORTHO05D008032 3.5e-55 219.2 222 51.4
Ca_21361_v3 Cicer arietinum L. HOM05D006316 ORTHO05D008032 1.1e-48 197.6 123 80.5
Glyma.09G159500 Glycine max HOM05D006316 ORTHO05D008032 3.2e-40 169.5 161 57.1
SEGI_01321 Sequoiadendron giganteum HOM05D006316 ORTHO05D008032 4.2e-40 169.1 123 69.1
PGSC0003DMG400027786 Solanum tuberosum HOM05D006316 ORTHO05D008032 4.5e-34 149.1 122 64.8
CSS0015998 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 6.7e-30 135.2 93 72.0
Glyma.17G042702 Glycine max HOM05D006316 ORTHO05D008032 5.5e-24 115.5 94 63.8
MBI18_g03841_MAGBIO Magnolia biondii HOM05D006046 ORTHO05D007580 4.7e-23 112.5 71 71.8
Cpa.g.sc146.8 Carica papaya HOM05D006316 ORTHO05D008032 1.4e-22 110.9 62 85.5
Solyc11g013410.2 Solanum lycopersicum HOM05D006316 ORTHO05D008032 1.2e-21 107.8 91 60.4
Cpa.g.c44700 Carica papaya HOM05D006316 ORTHO05D008032 4.8e-20 102.4 54 83.3
DCAR_030416 Daucus carota HOM05D006316 ORTHO05D008032 1.2e-18 97.8 100 54.0
Oeu020629.4 Olea europaea HOM05D002546 ORTHO05D002671 9.8e-13 78.2 65 63.1
Cfa025220 Carpinus fangiana HOM05D006316 ORTHO05D008032 3.1e-11 73.2 153 31.4
Cre14.g619613 Chlamydomonas reinhardtii HOM05D006316 ORTHO05D008032 2.7e-10 70.1 156 26.9
RcHm_v2.0_Chr5g0025761 Rosa chinensis HOM05D006316 ORTHO05D008032 1.5e-08 64.3 71 49.3


User provided reference genes

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