Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G2062 Cannabis sativa HOM05D006226 ORTHO05D007738 0.0e+00 1383.2 690 100.0
CANSAT56G4481 Cannabis sativa HOM05D006226 ORTHO05D007738 1.2e-278 963.0 493 97.6
QL02p040023 Quercus lobata HOM05D006226 ORTHO05D007738 9.3e-242 840.5 648 65.0
Prupe.7G232400 Prunus persica HOM05D006226 ORTHO05D007738 1.0e-240 837.0 701 62.8
CiPaw.03G218400 Carya illinoinensis HOM05D006226 ORTHO05D007738 3.1e-237 825.5 656 65.5
Cfa003249 Carpinus fangiana HOM05D006226 ORTHO05D007738 9.0e-237 823.9 657 64.5
FAN26G0472 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.3e-235 820.1 701 61.3
FvH4_1g04570 Fragaria vesca HOM05D006226 ORTHO05D007738 8.4e-235 817.4 701 61.1
Ciclev10007624m.g Citrus clementina HOM05D006226 ORTHO05D007738 1.9e-234 816.2 707 61.4
FAN19G1825 Fragaria x ananassa HOM05D006226 ORTHO05D007738 7.1e-234 814.3 701 60.9
FAN23G2910 Fragaria x ananassa HOM05D006226 ORTHO05D007738 2.3e-232 809.3 701 60.8
RcHm_v2.0_Chr2g0090271 Rosa chinensis HOM05D006226 ORTHO05D007738 4.3e-231 805.1 701 60.9
MD15G1183800 Malus domestica HOM05D006226 ORTHO05D007738 5.3e-229 798.1 703 60.6
COL.COLO4_34848 Corchorus olitorius HOM05D006226 ORTHO05D007738 1.2e-228 797.0 643 62.8
Manes.16G114900 Manihot esculenta HOM05D006226 ORTHO05D007738 4.9e-227 791.6 710 59.4
GSVIVG01015381001 Vitis vinifera HOM05D006226 ORTHO05D007738 2.5e-226 789.3 656 62.3
Rhsim01G0096900 Rhododendron simsii HOM05D006226 ORTHO05D007738 1.8e-224 783.1 699 59.4
Sabra18G0068600 Salix brachista HOM05D006226 ORTHO05D007738 7.4e-223 777.7 707 58.4
ClCG06G008620 Citrullus lanatus HOM05D006226 ORTHO05D007738 2.4e-221 772.7 715 56.6
Gorai.009G025300 Gossypium raimondii HOM05D006226 ORTHO05D007738 4.0e-221 771.9 651 61.0
TAR383G0867 Trochodendron aralioides HOM05D006226 ORTHO05D007738 6.9e-221 771.2 711 57.5
MELO3C024624.2 Cucumis melo HOM05D006226 ORTHO05D007738 7.6e-220 767.7 711 56.4
Glyma.07G085400 Glycine max HOM05D006226 ORTHO05D007738 2.5e-218 762.7 712 58.0
arahy.Tifrunner.gnm1.ann1.9IQ1SY Arachis hypogaea HOM05D006226 ORTHO05D007738 4.2e-218 761.9 705 57.2
Medtr6g087530 Medicago truncatula HOM05D006226 ORTHO05D007738 2.7e-217 759.2 705 56.0
arahy.Tifrunner.gnm1.ann1.ZKYF3I Arachis hypogaea HOM05D006226 ORTHO05D007738 3.5e-217 758.8 705 57.2
Lj2g0027193 Lotus japonicus HOM05D006226 ORTHO05D007738 8.7e-216 754.2 713 56.8
Potri.018G081500 Populus trichocarpa HOM05D006226 ORTHO05D007738 1.3e-214 750.4 710 56.6
Lj7C652G7 Lonicera japonica HOM05D006226 ORTHO05D007738 1.8e-213 746.5 645 59.2
Dinv36642 Davidia involucrata HOM05D006226 ORTHO05D007738 2.4e-213 746.1 616 63.0
Glyma.09G191500 Glycine max HOM05D006226 ORTHO05D007738 3.1e-213 745.7 712 56.9
Phvul.004G164600 Phaseolus vulgaris HOM05D006226 ORTHO05D007738 2.0e-212 743.0 645 59.2
Psat1g043440 Pisum sativum HOM05D006226 ORTHO05D007738 3.4e-212 742.3 713 54.8
Gohir.A05G023700 Gossypium hirsutum HOM05D006226 ORTHO05D007738 2.2e-211 739.6 708 56.1
TPR.G10046 Trifolium pratense HOM05D006226 ORTHO05D007738 7.9e-209 731.1 720 54.6
VMungo0464G1421 Vigna mungo HOM05D006226 ORTHO05D007738 1.4e-208 730.3 712 54.9
Sed0016798 Sechium edule HOM05D006226 ORTHO05D007738 7.4e-207 724.5 681 55.9
vmacro20706 Vaccinium macrocarpon HOM05D006226 ORTHO05D007738 4.8e-206 721.8 639 60.3
Eucgr.C01033 Eucalyptus grandis HOM05D006226 ORTHO05D007738 5.9e-204 714.9 636 58.2
PSO210G1415 Papaver somniferum HOM05D006226 ORTHO05D007738 1.3e-203 713.8 671 57.2
Aqoxy7G03848 Aquilegia oxysepala HOM05D006226 ORTHO05D007738 5.0e-203 711.8 655 57.1
PSO210G0226 Papaver somniferum HOM05D006226 ORTHO05D007738 2.5e-202 709.5 658 57.6
FAN28G0796 Fragaria x ananassa HOM05D006226 ORTHO05D007738 2.7e-201 706.1 622 60.6
Cpa.g.sc23.97 Carica papaya HOM05D006226 ORTHO05D007738 2.6e-196 689.5 614 60.1
AUR62010999 Chenopodium quinoa HOM05D006226 ORTHO05D007738 1.3e-195 687.2 711 54.0
AUR62021510 Chenopodium quinoa HOM05D006226 ORTHO05D007738 2.9e-195 686.0 716 52.9
HanXRQChr12g0354991 Helianthus annuus HOM05D006226 ORTHO05D007738 1.2e-193 680.6 692 51.7
Carub.0003s2495 Capsella rubella HOM05D006226 ORTHO05D007738 1.6e-193 680.2 643 56.5
PGR142G1694 Punica granatum HOM05D006226 ORTHO05D007738 2.7e-193 679.5 696 53.9
Nitab4.5_0004070g0080 Nicotiana tabacum HOM05D006226 ORTHO05D007738 1.0e-192 677.6 709 51.6
AT3G24560 Arabidopsis thaliana HOM05D006226 ORTHO05D007738 1.8e-192 676.8 643 56.8
Cc06_g09770 Coffea canephora HOM05D006226 ORTHO05D007738 3.3e-191 672.5 698 52.1
PGSC0003DMG400026545 Solanum tuberosum HOM05D006226 ORTHO05D007738 3.3e-191 672.5 642 53.9
CAN.G644.14 Capsicum annuum HOM05D006226 ORTHO05D007738 2.2e-190 669.8 707 51.1
Sopen11g026750 Solanum pennellii HOM05D006226 ORTHO05D007738 1.1e-189 667.5 710 50.3
THA.LOC104808766 Tarenaya hassleriana HOM05D006226 ORTHO05D007738 2.4e-189 666.4 682 53.5
Sc16g0007880 Simmondsia chinensis HOM05D006226 ORTHO05D007738 9.1e-189 664.5 698 51.7
AL3G40100 Arabidopsis lyrata HOM05D006226 ORTHO05D007738 2.6e-188 662.9 628 56.5
BcaC06g35722 Brassica carinata HOM05D006226 ORTHO05D007738 1.0e-187 661.0 704 52.7
BolC7t41639H Brassica oleracea HOM05D006226 ORTHO05D007738 1.0e-187 661.0 704 52.7
CARHR100790 Cardamine hirsuta HOM05D006226 ORTHO05D007738 1.0e-187 661.0 704 52.8
Thhalv10002431m.g Eutrema salsugineum HOM05D006226 ORTHO05D007738 1.3e-187 660.6 644 55.0
Actinidia32679 Actinidia chinensis HOM05D006226 ORTHO05D007738 5.0e-187 658.7 611 57.0
BcaB06g26659 Brassica carinata HOM05D006226 ORTHO05D007738 3.2e-186 656.0 685 54.0
Sp3g22350 Schrenkiella parvula HOM05D006226 ORTHO05D007738 3.2e-186 656.0 683 53.6
C07p11670 Brassica napus HOM05D006226 ORTHO05D007738 4.7e-185 652.1 705 52.3
BraA07t28567Z Brassica rapa HOM05D006226 ORTHO05D007738 1.4e-184 650.6 707 52.3
A07p07760 Brassica napus HOM05D006226 ORTHO05D007738 5.7e-183 645.2 727 51.2
ECA233G1203 Erigeron canadensis HOM05D006226 ORTHO05D007738 6.3e-182 641.7 626 53.8
DCAR_002532 Daucus carota HOM05D006226 ORTHO05D007738 4.5e-180 635.6 636 53.0
Nitab4.5_0006735g0020 Nicotiana tabacum HOM05D006226 ORTHO05D007738 5.0e-179 632.1 694 49.7
CsaV3_1G025440 Cucumis sativus L. HOM05D006226 ORTHO05D007738 1.9e-178 630.2 540 58.5
Lsat_1_v5_gn_8_3640 Lactuca sativa HOM05D006226 ORTHO05D007738 1.5e-175 620.5 692 50.0
SalBow6G3053 Salvia bowleyana HOM05D006226 ORTHO05D007738 3.4e-175 619.4 693 48.8
Migut.C00317 Erythranthe guttata HOM05D006226 ORTHO05D007738 2.0e-172 610.1 660 50.8
Gohir.D05G025200 Gossypium hirsutum HOM05D006226 ORTHO05D007738 2.1e-169 600.1 524 59.7
Atru.chr7.1363 Acer truncatum HOM05D006226 ORTHO05D007738 6.8e-168 595.1 477 64.6
Aa31sc29G50 Aethionema arabicum HOM05D006226 ORTHO05D007738 3.4e-167 592.8 698 49.1
Migut.G00900 Erythranthe guttata HOM05D006226 ORTHO05D007738 4.9e-166 589.0 645 50.2
Migut.K01516 Erythranthe guttata HOM05D006226 ORTHO05D007738 1.9e-162 577.0 657 48.6
Thecc.09G109000 Theobroma cacao HOM05D006226 ORTHO05D007738 6.1e-161 572.0 492 61.4
Zm00001eb237720 Zea mays HOM05D006226 ORTHO05D007738 8.6e-155 551.6 686 45.8
Hund09200 Selenicereus undatus HOM05D006226 ORTHO05D007738 9.5e-154 548.1 641 48.8
SGA_v2.0_scaffold57G20229 Striga asiatica HOM05D006226 ORTHO05D007738 1.6e-153 547.4 721 44.1
EL10Ac8g18501 Beta vulgaris HOM05D006226 ORTHO05D007738 8.3e-150 535.0 683 48.9
CSS0010508 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 3.3e-146 523.1 610 50.7
CSS0044649 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 1.2e-140 504.6 609 49.9
Oeu002240.1 Olea europaea HOM05D006226 ORTHO05D007738 6.2e-137 492.3 485 53.0
Ah.14g081980 Amaranthus hybridus HOM05D006226 ORTHO05D007738 4.9e-134 482.6 530 50.0
Haze_25736 Corylus avellana HOM05D006226 ORTHO05D007738 1.6e-132 477.6 310 75.5
Nn8g39152 Nelumbo nucifera HOM05D006226 ORTHO05D007738 4.3e-130 469.5 334 68.3
MBI04_g22018_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 1.4e-128 464.5 384 61.5
Lalb_Chr06g0174391 Lupinus albus HOM05D006226 ORTHO05D007738 1.0e-115 421.8 339 64.0
unitig_748.g7367 Utricularia gibba HOM05D006226 ORTHO05D007738 2.5e-109 400.6 642 39.9
Hma1.2p1_1463F.1_g285100 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 2.3e-107 394.0 399 54.9
ATR0315G013 Amborella trichopoda HOM05D006226 ORTHO05D007738 3.8e-102 376.7 306 59.8
Solyc11g067040.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 3.9e-99 366.7 314 57.3
AagrBONN_evm.TU.Sc2ySwM_368.2586 Anthoceros agrestis HOM05D006226 ORTHO05D007738 2.2e-97 360.9 648 36.4
CANSAT56G3567 Cannabis sativa HOM05D006226 ORTHO05D007738 1.4e-93 348.2 173 99.4
Mapoly0045s0077 Marchantia polymorpha HOM05D006226 ORTHO05D007738 1.1e-90 338.6 710 32.5
Peaxi162Scf01284g00025 Petunia axillaris HOM05D006226 ORTHO05D007738 3.3e-90 337.0 328 54.0
Peaxi162Scf01284g00019 Petunia axillaris HOM05D006226 ORTHO05D007738 1.0e-86 325.5 371 47.7
Solyc11g067030.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 1.0e-83 315.5 370 46.5
Lalb_Chr06g0174401 Lupinus albus HOM05D006226 ORTHO05D007738 4.8e-81 306.6 323 48.6
ECA234G2375 Erigeron canadensis HOM05D006226 ORTHO05D007738 1.8e-75 288.1 606 33.2
SMO170G0077 Selaginella moellendorffii HOM05D006226 ORTHO05D007738 3.5e-71 273.9 635 31.2
Hma1.2p1_1463F.1_g285110 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 9.4e-69 265.8 309 50.5
Pp3c5_3840 Physcomitrium patens HOM05D006226 ORTHO05D007738 8.0e-68 262.7 547 34.0
MBI04_g29967_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 2.0e-63 248.1 393 41.5
ATR0315G018 Amborella trichopoda HOM05D006226 ORTHO05D007738 2.6e-50 204.5 334 40.7
CDE04G3650 Ceratophyllum demersum HOM05D001758 ORTHO05D005969 1.3e-49 202.2 148 63.5
SGA_v2.0_scaffold88G27188 Striga asiatica HOM05D006226 ORTHO05D007738 2.6e-42 177.9 213 44.6
Nitab4.5_0004070g0110 Nicotiana tabacum HOM05D006226 ORTHO05D007738 3.3e-37 161.0 253 39.9
SGA_v2.0_scaffold3110G54276 Striga asiatica HOM05D006226 ORTHO05D007738 8.1e-36 156.4 120 59.2
Os02g0266500 Oryza sativa ssp. japonica HOM05D006226 ORTHO05D007738 2.3e-35 154.8 123 56.9
CBR_g23439 Chara braunii HOM05D000019 ORTHO05D000002 2.9e-33 147.9 279 35.5
Nitab4.5_0004070g0120 Nicotiana tabacum HOM05D006226 ORTHO05D007738 2.9e-33 147.9 196 44.9
HanXRQChr00c0062g0571541 Helianthus annuus HOM05D006226 ORTHO05D007738 7.3e-29 133.3 168 44.0
SEGI_09304 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 6.2e-28 130.2 144 39.6
Lsat_1_v5_gn_4_168221 Lactuca sativa HOM05D006226 ORTHO05D007738 1.4e-24 119.0 159 44.7
HPP92_005262 Vanilla planifolia HOM05D006226 ORTHO05D007738 1.5e-18 99.0 77 62.3
Actinidia07412 Actinidia chinensis HOM05D006226 ORTHO05D007738 8.4e-17 93.2 296 29.1
SEGI_25817 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 1.1e-16 92.8 78 52.6
Pp3c24_3750 Physcomitrium patens HOM05D028917 ORTHO05D023487 5.4e-16 90.5 339 24.8
HanXRQChr00c0062g0571551 Helianthus annuus HOM05D006226 ORTHO05D007738 2.5e-13 81.6 120 40.0
CDE04G0435 Ceratophyllum demersum HOM05D006226 ORTHO05D007738 9.6e-13 79.7 167 35.3
MCO09G126 Micromonas commoda HOM05D006226 ORTHO05D007738 2.4e-11 75.1 207 29.0
Medtr6g087540 Medicago truncatula HOM05D006226 ORTHO05D007738 4.5e-10 70.9 128 35.9
PRCOL_00000419 Prasinoderma coloniale HOM05D006226 ORTHO05D023487 7.6e-10 70.1 222 26.1
HPP92_005261 Vanilla planifolia HOM05D006226 ORTHO05D007738 9.9e-10 69.7 70 47.1
Mapoly0061s0136 Marchantia polymorpha HOM05D028917 ORTHO05D023487 6.4e-09 67.0 313 22.7


User provided reference genes

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