Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G1917 Cannabis sativa HOM05D006185 ORTHO05D007572 2.1e-111 405.6 191 100.0
CANSAT56G3530 Cannabis sativa HOM05D006185 ORTHO05D007572 8.0e-111 403.7 191 99.5
CANSAT56G1413 Cannabis sativa HOM05D006185 ORTHO05D007572 3.2e-107 391.7 191 97.4
CANSAT56G0026 Cannabis sativa HOM05D006185 ORTHO05D007572 3.9e-105 384.8 191 95.8
QL11p001224 Quercus lobata HOM05D006185 ORTHO05D007572 1.6e-87 326.2 190 78.9
ClCG03G014940 Citrullus lanatus HOM05D006185 ORTHO05D007572 3.6e-87 325.1 187 79.7
CsaV3_1G041210 Cucumis sativus L. HOM05D006185 ORTHO05D007572 8.1e-87 323.9 187 79.1
Duzib150G0101 Durio zibethinus HOM05D006185 ORTHO05D007572 1.8e-86 322.8 191 78.0
Prupe.7G195700 Prunus persica HOM05D006185 ORTHO05D007572 3.1e-86 322.0 190 77.9
Duzib187G0940 Durio zibethinus HOM05D006185 ORTHO05D007572 1.3e-84 316.6 191 77.5
Cpa.g.sc28.15 Carica papaya HOM05D006185 ORTHO05D007572 2.9e-84 315.5 191 73.8
Atru.chr7.1733 Acer truncatum HOM05D006185 ORTHO05D007572 3.8e-84 315.1 191 74.3
Gohir.D05G035900 Gossypium hirsutum HOM05D006185 ORTHO05D007572 4.9e-84 314.7 191 77.0
Gorai.009G036500 Gossypium raimondii HOM05D006185 ORTHO05D007572 4.9e-84 314.7 191 77.0
MELO3C015534.2 Cucumis melo HOM05D006185 ORTHO05D007572 1.1e-83 313.5 206 72.8
Thecc.09G074200 Theobroma cacao HOM05D006185 ORTHO05D007572 1.4e-83 313.2 191 78.0
Gohir.A05G034500 Gossypium hirsutum HOM05D006185 ORTHO05D007572 1.9e-83 312.8 191 76.4
Peaxi162Scf00928g00132 Petunia axillaris HOM05D006185 ORTHO05D007572 5.4e-83 311.2 190 74.2
Potri.006G140000 Populus trichocarpa HOM05D006185 ORTHO05D007572 7.1e-83 310.8 191 75.9
TWI63G0883 Tripterygium wilfordii HOM05D006185 ORTHO05D007572 1.2e-82 310.1 191 74.3
FAN26G0065 Fragaria x ananassa HOM05D006185 ORTHO05D007572 2.1e-82 309.3 188 74.5
FAN26G3397 Fragaria x ananassa HOM05D006185 ORTHO05D007572 2.1e-82 309.3 188 74.5
COL.COLO4_18072 Corchorus olitorius HOM05D006185 ORTHO05D007572 3.5e-82 308.5 191 74.3
Dinv25540 Davidia involucrata HOM05D006185 ORTHO05D007572 3.5e-82 308.5 191 73.3
Migut.L01579 Erythranthe guttata HOM05D006185 ORTHO05D007572 4.6e-82 308.1 190 73.7
Manes.03G041800 Manihot esculenta HOM05D006185 ORTHO05D007572 4.6e-82 308.1 191 74.3
Cfa002967 Carpinus fangiana HOM05D006185 ORTHO05D007572 1.3e-81 306.6 190 72.6
Ciclev10009607m.g Citrus clementina HOM05D006185 ORTHO05D007572 1.3e-81 306.6 191 75.4
CAN.G1661.20 Capsicum annuum HOM05D006185 ORTHO05D007572 2.3e-81 305.8 191 72.8
Nitab4.5_0000073g0300 Nicotiana tabacum HOM05D006185 ORTHO05D007572 6.6e-81 304.3 189 73.0
Nitab4.5_0004234g0030 Nicotiana tabacum HOM05D006185 ORTHO05D007572 6.6e-81 304.3 189 72.5
Solyc12g009180.2 Solanum lycopersicum HOM05D006185 ORTHO05D007572 6.6e-81 304.3 188 73.4
Sopen12g004130 Solanum pennellii HOM05D006185 ORTHO05D007572 6.6e-81 304.3 188 72.9
Haze_26036 Corylus avellana HOM05D006185 ORTHO05D007572 8.6e-81 303.9 191 72.8
SGA_v2.0_scaffold296G47554 Striga asiatica HOM05D006185 ORTHO05D007572 1.1e-80 303.5 188 75.0
RcHm_v2.0_Chr2g0095441 Rosa chinensis HOM05D006185 ORTHO05D007572 1.9e-80 302.8 190 72.6
Eucgr.C03305 Eucalyptus grandis HOM05D006185 ORTHO05D007572 2.5e-80 302.4 190 70.0
SalBow5G0266 Salvia bowleyana HOM05D006185 ORTHO05D007572 3.3e-80 302.0 188 73.4
PGSC0003DMG400002903 Solanum tuberosum HOM05D006185 ORTHO05D007572 7.3e-80 300.8 188 71.8
Gorai.010G090200 Gossypium raimondii HOM05D006185 ORTHO05D007572 9.6e-80 300.4 187 74.9
MD02G1095400 Malus domestica HOM05D006185 ORTHO05D007572 9.6e-80 300.4 190 75.3
CiPaw.03G203800 Carya illinoinensis HOM05D006185 ORTHO05D007572 1.6e-79 299.7 191 70.2
FvH4_1g09020 Fragaria vesca HOM05D006185 ORTHO05D007572 1.6e-79 299.7 188 72.3
FAN19G1369 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.6e-79 299.7 188 72.3
FAN23G1580 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.6e-79 299.7 188 72.3
GSVIVG01015050001 Vitis vinifera HOM05D006185 ORTHO05D007572 3.6e-79 298.5 191 71.2
EL10Ac8g19027 Beta vulgaris HOM05D006185 ORTHO05D007572 4.0e-78 295.0 187 74.3
Ca_09309_v3 Cicer arietinum L. HOM05D006185 ORTHO05D007572 4.0e-78 295.0 189 71.4
Cc06_g12450 Coffea canephora HOM05D006185 ORTHO05D007572 4.0e-78 295.0 191 69.1
Sabra06G0109300 Salix brachista HOM05D006185 ORTHO05D007572 5.2e-78 294.7 222 64.4
Sc06g0006920 Simmondsia chinensis HOM05D006185 ORTHO05D007572 1.2e-77 293.5 187 72.2
Psat7g057800 Pisum sativum HOM05D006185 ORTHO05D007572 1.5e-77 293.1 188 71.8
THA.LOC104799837 Tarenaya hassleriana HOM05D006185 ORTHO05D007572 2.6e-77 292.4 191 70.2
vmacro17122 Vaccinium macrocarpon HOM05D006185 ORTHO05D007572 5.8e-77 291.2 190 68.9
Oeu062247.1 Olea europaea HOM05D006185 ORTHO05D007572 1.3e-76 290.0 192 69.8
TAR624G1115 Trochodendron aralioides HOM05D006185 ORTHO05D007572 1.3e-76 290.0 192 71.4
Thhalv10008865m.g Eutrema salsugineum HOM05D006185 ORTHO05D007572 1.7e-76 289.7 191 69.1
Ah.09g229250 Amaranthus hybridus HOM05D006185 ORTHO05D007572 2.9e-76 288.9 187 71.7
AL1G31710 Arabidopsis lyrata HOM05D006185 ORTHO05D007572 8.4e-76 287.3 191 68.1
BraA08t34935Z Brassica rapa HOM05D006185 ORTHO05D007572 8.4e-76 287.3 191 67.5
Rhsim05G0005100 Rhododendron simsii HOM05D006185 ORTHO05D007572 8.4e-76 287.3 191 69.6
TPR.G12562 Trifolium pratense HOM05D006185 ORTHO05D007572 8.4e-76 287.3 189 69.8
A08p30000 Brassica napus HOM05D006185 ORTHO05D007572 1.1e-75 287.0 191 67.0
AT1G19130 Arabidopsis thaliana HOM05D006185 ORTHO05D007572 1.9e-75 286.2 191 68.1
C08p19220 Brassica napus HOM05D006185 ORTHO05D007572 1.9e-75 286.2 191 67.5
BolC8t49541H Brassica oleracea HOM05D006185 ORTHO05D007572 1.9e-75 286.2 191 67.5
PGR044G1997 Punica granatum HOM05D006185 ORTHO05D007572 1.9e-75 286.2 191 67.5
Carub.0001s1876 Capsella rubella HOM05D006185 ORTHO05D007572 2.4e-75 285.8 191 68.1
Phvul.003G129600 Phaseolus vulgaris HOM05D006185 ORTHO05D007572 2.4e-75 285.8 191 70.2
BcaC07g38980 Brassica carinata HOM05D006185 ORTHO05D007572 4.2e-75 285.0 191 67.0
VMungo1215G2404 Vigna mungo HOM05D006185 ORTHO05D007572 4.2e-75 285.0 191 70.2
Hund26074 Selenicereus undatus HOM05D006185 ORTHO05D007572 9.3e-75 283.9 187 70.1
Aa31LG7G3870 Aethionema arabicum HOM05D006185 ORTHO05D007572 2.7e-74 282.3 191 68.6
BcaB03g12935 Brassica carinata HOM05D006185 ORTHO05D007572 2.7e-74 282.3 192 67.2
Lj4g0025093 Lotus japonicus HOM05D006185 ORTHO05D007572 2.7e-74 282.3 190 70.5
DCAR_010492 Daucus carota HOM05D006185 ORTHO05D007572 3.5e-74 282.0 186 70.4
ECA236G4868 Erigeron canadensis HOM05D006185 ORTHO05D007572 4.6e-74 281.6 189 68.3
Lj7A688T82 Lonicera japonica HOM05D006185 ORTHO05D007572 6.0e-74 281.2 193 69.4
CSS0028340 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 7.8e-74 280.8 190 68.9
CSS0016181 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 1.0e-73 280.4 189 69.3
Medtr4g125100 Medicago truncatula HOM05D006185 ORTHO05D007572 1.0e-73 280.4 190 67.9
Lalb_Chr07g0181271 Lupinus albus HOM05D006185 ORTHO05D007572 3.0e-73 278.9 189 68.8
HanXRQChr04g0125931 Helianthus annuus HOM05D006185 ORTHO05D007572 3.9e-73 278.5 190 69.5
Glyma.13G111600 Glycine max HOM05D006185 ORTHO05D007572 8.7e-73 277.3 194 67.0
Sc08g0009100 Simmondsia chinensis HOM05D006185 ORTHO05D007572 1.1e-72 276.9 190 65.8
Hund26091 Selenicereus undatus HOM05D006185 ORTHO05D007572 1.9e-72 276.2 191 67.5
Lsat_1_v5_gn_8_85701 Lactuca sativa HOM05D006185 ORTHO05D007572 3.3e-72 275.4 191 67.0
Eucgr.C00790 Eucalyptus grandis HOM05D006185 ORTHO05D007572 1.4e-70 270.0 191 65.4
AUR62028304 Chenopodium quinoa HOM05D006185 ORTHO05D007572 3.1e-70 268.9 187 65.2
Actinidia30236 Actinidia chinensis HOM05D006185 ORTHO05D007572 6.9e-70 267.7 229 56.3
Nn6g35681 Nelumbo nucifera HOM05D006185 ORTHO05D007572 5.8e-69 264.6 189 66.7
unitig_699.g19263 Utricularia gibba HOM05D000454 ORTHO05D007572 9.9e-69 263.8 185 65.4
EL10Ac8g18996 Beta vulgaris HOM05D006185 ORTHO05D007572 1.1e-67 260.4 191 63.4
AUR62025298 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.4e-67 260.0 187 63.6
Aqoxy7G04191 Aquilegia oxysepala HOM05D006185 ORTHO05D007572 5.4e-67 258.1 192 65.1
Sed0027040 Sechium edule HOM05D006185 ORTHO05D007572 7.1e-67 257.7 146 77.4
AUR62028278 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.6e-66 256.5 187 65.2
HanXRQChr06g0168681 Helianthus annuus HOM05D006185 ORTHO05D007572 2.1e-66 256.1 185 63.8
MBI13_g00698_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 2.7e-66 255.8 190 65.8
AUR62025276 Chenopodium quinoa HOM05D006185 ORTHO05D007572 3.9e-65 251.9 145 77.9
ECA236G2592 Erigeron canadensis HOM05D006185 ORTHO05D007572 3.9e-65 251.9 186 63.4
Nn5g27974 Nelumbo nucifera HOM05D006185 ORTHO05D007572 6.7e-65 251.1 189 64.0
Lsat_1_v5_gn_8_85721 Lactuca sativa HOM05D006185 ORTHO05D007572 7.4e-64 247.7 186 62.9
arahy.Tifrunner.gnm1.ann1.Y0H2IU Arachis hypogaea HOM05D006185 ORTHO05D007572 6.2e-63 244.6 189 63.5
arahy.Tifrunner.gnm1.ann1.85MSRM Arachis hypogaea HOM05D006185 ORTHO05D007572 1.1e-62 243.8 189 63.0
Gohir.A06G078100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 1.4e-62 243.4 187 63.1
Lalb_Chr12g0200241 Lupinus albus HOM05D006185 ORTHO05D007572 4.0e-62 241.9 188 61.7
Zm00001eb040490 Zea mays HOM05D006185 ORTHO05D007572 2.0e-61 239.6 186 60.2
HPP92_004362 Vanilla planifolia HOM05D006185 ORTHO05D007572 9.9e-61 237.3 185 63.2
Os08g0455800 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 1.3e-60 236.9 186 59.1
ATR0006G060 Amborella trichopoda HOM05D006185 ORTHO05D007572 3.8e-60 235.3 189 60.3
MBI19_g05291_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 2.1e-58 229.6 181 62.4
Os06g0198500 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 8.7e-57 224.2 186 58.1
Gohir.D06G077100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 2.5e-56 222.6 132 76.5
SEGI_13235 Sequoiadendron giganteum HOM05D006185 ORTHO05D007572 1.4e-54 216.9 187 57.8
Mapoly0007s0060 Marchantia polymorpha HOM05D006185 ORTHO05D007572 1.5e-53 213.4 187 56.1
MBI13_g47248_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 4.5e-53 211.8 190 56.8
SMO340G0144 Selaginella moellendorffii HOM05D006185 ORTHO05D007572 6.5e-52 208.0 187 53.5
Pp3c9_22400 Physcomitrium patens HOM05D006185 ORTHO05D007572 3.2e-51 205.7 189 51.9
MSTRG.26479 Avicennia marina HOM05D006185 ORTHO05D007572 3.9e-41 172.2 111 69.4
Ah.14g084750 Amaranthus hybridus HOM05D006185 ORTHO05D007572 3.9e-33 145.6 110 60.0
FAN28G1197 Fragaria x ananassa HOM05D006185 ORTHO05D007572 2.6e-29 132.9 83 69.9
CARHR019730 Cardamine hirsuta HOM05D006185 ORTHO05D007572 3.8e-28 129.0 83 71.1
MBI14_g46913_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 2.8e-23 112.8 100 56.0
Os06g0198600 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 1.6e-21 107.1 116 50.9
Eucgr.C00789 Eucalyptus grandis HOM05D006185 ORTHO05D007572 7.2e-19 98.2 87 50.6
BcaB02g10882 Brassica carinata HOM05D006185 ORTHO05D007572 6.5e-12 75.1 78 46.2


User provided reference genes

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