Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G1022 Cannabis sativa HOM05D006533 ORTHO05D008625 1.9e-234 815.5 412 100.0
CANSAT56G3916 Cannabis sativa HOM05D006533 ORTHO05D008625 2.1e-233 812.0 412 99.5
QL09p024067 Quercus lobata HOM05D006533 ORTHO05D008625 1.1e-168 597.0 410 74.1
CiPaw.06G033000 Carya illinoinensis HOM05D006533 ORTHO05D008625 2.0e-167 592.8 416 72.4
FvH4_7g33920 Fragaria vesca HOM05D006533 ORTHO05D008625 5.5e-165 584.7 413 70.9
FAN10G3989 Fragaria x ananassa HOM05D006533 ORTHO05D008625 3.5e-164 582.0 413 70.2
FAN03G0602 Fragaria x ananassa HOM05D006533 ORTHO05D008625 1.3e-161 573.5 405 69.9
RcHm_v2.0_Chr1g0384131 Rosa chinensis HOM05D006533 ORTHO05D008625 4.8e-161 571.6 412 70.1
MD07G1308500 Malus domestica HOM05D006533 ORTHO05D008625 5.3e-160 568.2 415 70.8
GSVIVG01024411001 Vitis vinifera HOM05D006533 ORTHO05D008625 1.1e-157 560.5 422 68.7
Prupe.2G325700 Prunus persica HOM05D006533 ORTHO05D008625 2.5e-157 559.3 414 69.8
Thecc.01G135900 Theobroma cacao HOM05D006533 ORTHO05D008625 5.9e-151 538.1 416 68.5
Eucgr.K00088 Eucalyptus grandis HOM05D006533 ORTHO05D008625 1.4e-147 526.9 404 68.6
Glyma.01G228300 Glycine max HOM05D006533 ORTHO05D008625 6.7e-147 524.6 397 67.3
Sed0002742 Sechium edule HOM05D006533 ORTHO05D008625 2.0e-146 523.1 396 66.9
Potri.013G082000 Populus trichocarpa HOM05D006533 ORTHO05D008625 9.7e-146 520.8 414 66.9
Cfa006012 Carpinus fangiana HOM05D006533 ORTHO05D008625 1.3e-145 520.4 416 65.9
Gohir.A09G004900 Gossypium hirsutum HOM05D006533 ORTHO05D008625 4.8e-145 518.5 416 66.6
Gorai.006G005800 Gossypium raimondii HOM05D006533 ORTHO05D008625 4.8e-145 518.5 416 66.3
Sabra13G0070900 Salix brachista HOM05D006533 ORTHO05D008625 4.8e-145 518.5 414 65.9
Actinidia34305 Actinidia chinensis HOM05D006533 ORTHO05D008625 6.3e-145 518.1 395 68.1
Gohir.D09G004200 Gossypium hirsutum HOM05D006533 ORTHO05D008625 8.2e-145 517.7 416 66.3
Ciclev10020455m.g Citrus clementina HOM05D006533 ORTHO05D008625 1.1e-144 517.3 418 65.6
Lj6g0021866 Lotus japonicus HOM05D006533 ORTHO05D008625 1.4e-144 516.9 404 66.6
Lalb_Chr09g0320221 Lupinus albus HOM05D006533 ORTHO05D008625 1.8e-144 516.5 403 65.5
Oeu060384.1 Olea europaea HOM05D006533 ORTHO05D008625 4.1e-144 515.4 409 67.2
Solyc02g094260.1 Solanum lycopersicum HOM05D006533 ORTHO05D008625 5.3e-144 515.0 417 63.8
Sopen02g038900 Solanum pennellii HOM05D006533 ORTHO05D008625 2.0e-143 513.1 417 63.8
PGSC0003DMG400020249 Solanum tuberosum HOM05D006533 ORTHO05D008625 1.7e-142 510.0 416 63.2
Phvul.002G039600 Phaseolus vulgaris HOM05D006533 ORTHO05D008625 5.0e-142 508.4 404 63.4
MSTRG.8576 Avicennia marina HOM05D006533 ORTHO05D008625 6.5e-142 508.1 414 64.5
ClCG05G007010 Citrullus lanatus HOM05D006533 ORTHO05D008625 6.5e-142 508.1 416 63.2
CsaV3_3G015700 Cucumis sativus L. HOM05D006533 ORTHO05D008625 3.2e-141 505.8 416 63.0
Glyma.11G011100 Glycine max HOM05D006533 ORTHO05D008625 9.4e-141 504.2 403 64.8
AUR62002060 Chenopodium quinoa HOM05D006533 ORTHO05D008625 1.6e-140 503.4 417 62.8
Cc02_g00290 Coffea canephora HOM05D006533 ORTHO05D008625 3.6e-140 502.3 421 63.2
Ca_24442_v3 Cicer arietinum L. HOM05D006533 ORTHO05D008625 5.2e-139 498.4 397 65.5
ECA232G2080 Erigeron canadensis HOM05D006533 ORTHO05D008625 5.2e-139 498.4 431 63.1
SGA_v2.0_scaffold18G08508 Striga asiatica HOM05D006533 ORTHO05D008625 5.2e-139 498.4 413 63.4
Atru.chr1.2781 Acer truncatum HOM05D006533 ORTHO05D008625 1.1e-138 497.3 412 65.8
PGR142G1840 Punica granatum HOM05D006533 ORTHO05D008625 7.5e-138 494.6 416 62.7
Manes.09G124800 Manihot esculenta HOM05D006533 ORTHO05D008625 1.3e-137 493.8 416 63.9
Medtr5g007700 Medicago truncatula HOM05D006533 ORTHO05D008625 1.3e-137 493.8 397 64.5
AUR62028174 Chenopodium quinoa HOM05D006533 ORTHO05D008625 4.8e-137 491.9 417 62.6
arahy.Tifrunner.gnm1.ann1.NII7HE Arachis hypogaea HOM05D006533 ORTHO05D008625 1.1e-136 490.7 397 63.2
Psat2g188880 Pisum sativum HOM05D006533 ORTHO05D008625 1.4e-136 490.3 395 65.3
VMungo1215G1087 Vigna mungo HOM05D006533 ORTHO05D008625 1.2e-135 487.3 379 64.1
Migut.F00098 Erythranthe guttata HOM05D006533 ORTHO05D008625 1.6e-135 486.9 416 62.5
AL6G27960 Arabidopsis lyrata HOM05D006533 ORTHO05D008625 4.5e-135 485.3 412 62.9
CSS0012834 Camellia sinensis var. sinensis HOM05D006533 ORTHO05D008625 7.7e-135 484.6 397 64.5
CARHR196200 Cardamine hirsuta HOM05D006533 ORTHO05D008625 1.3e-134 483.8 412 62.1
Lsat_1_v5_gn_9_47461 Lactuca sativa HOM05D006533 ORTHO05D008625 5.0e-134 481.9 422 62.1
Cpa.g.sc39.72 Carica papaya HOM05D006533 ORTHO05D008625 1.1e-133 480.7 396 64.9
THA.LOC104820882 Tarenaya hassleriana HOM05D006533 ORTHO05D008625 1.9e-133 479.9 415 61.4
Aa31LG11G12640 Aethionema arabicum HOM05D006533 ORTHO05D008625 4.2e-133 478.8 414 62.3
Duzib264G0907 Durio zibethinus HOM05D006533 ORTHO05D008625 1.6e-132 476.9 416 63.7
COL.COLO4_35796 Corchorus olitorius HOM05D006533 ORTHO05D008625 2.7e-132 476.1 411 63.5
arahy.Tifrunner.gnm1.ann1.YJZS8S Arachis hypogaea HOM05D006533 ORTHO05D008625 6.1e-132 474.9 423 59.6
vmacro06509 Vaccinium macrocarpon HOM05D006533 ORTHO05D008625 2.0e-130 469.9 397 63.0
Sc06g0002540 Simmondsia chinensis HOM05D006533 ORTHO05D008625 3.4e-130 469.2 403 61.5
Nitab4.5_0001510g0030 Nicotiana tabacum HOM05D006533 ORTHO05D008625 4.4e-130 468.8 441 59.4
TAR374G0999 Trochodendron aralioides HOM05D006533 ORTHO05D008625 4.4e-130 468.8 412 60.0
Lj3A887G72 Lonicera japonica HOM05D006533 ORTHO05D008625 6.3e-129 464.9 398 61.8
Sabra06G0125800 Salix brachista HOM05D006533 ORTHO05D008625 1.4e-128 463.8 414 61.1
EL10Ac3g05080 Beta vulgaris HOM05D006533 ORTHO05D008625 3.1e-128 462.6 429 58.3
Aqoxy3G02101 Aquilegia oxysepala HOM05D006533 ORTHO05D008625 4.5e-127 458.8 402 59.5
HanXRQChr05g0141721 Helianthus annuus HOM05D006533 ORTHO05D008625 1.9e-125 453.4 414 60.4
Ah.04g156530 Amaranthus hybridus HOM05D006533 ORTHO05D008625 3.2e-125 452.6 385 60.5
PSO063G2320 Papaver somniferum HOM05D006533 ORTHO05D008625 3.2e-125 452.6 398 60.1
LjContig00222g0024674 Lotus japonicus HOM05D006533 ORTHO05D008625 6.1e-124 448.4 354 66.7
CAN.G473.117 Capsicum annuum HOM05D006533 ORTHO05D008625 1.0e-123 447.6 369 63.4
Peaxi162Scf00133g00721 Petunia axillaris HOM05D006533 ORTHO05D008625 1.2e-122 444.1 409 58.7
Hund09790 Selenicereus undatus HOM05D006533 ORTHO05D008625 2.0e-122 443.4 418 58.1
Medtr5g061700 Medicago truncatula HOM05D006533 ORTHO05D008625 2.2e-121 439.9 403 58.3
MELO3C006767.2 Cucumis melo HOM05D006533 ORTHO05D008625 1.4e-120 437.2 430 56.3
Hma1.2p1_3802F.1_g337635 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.4e-120 436.4 339 66.7
Nn1g01934 Nelumbo nucifera HOM05D006533 ORTHO05D008625 1.2e-119 434.1 412 57.0
PSO782G0079 Papaver somniferum HOM05D006533 ORTHO05D008625 6.6e-118 428.3 379 59.6
Nitab4.5_0005342g0010 Nicotiana tabacum HOM05D006533 ORTHO05D008625 8.6e-118 427.9 466 53.6
unitig_0.g2430 Utricularia gibba HOM05D006533 ORTHO05D008625 8.6e-118 427.9 398 58.0
MBI04_g36026_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 9.5e-117 424.5 397 57.9
ATR0829G094 Amborella trichopoda HOM05D006533 ORTHO05D008625 1.6e-116 423.7 428 52.6
Dinv17259 Davidia involucrata HOM05D006533 ORTHO05D008625 1.6e-116 423.7 314 70.4
SalBow4G2334 Salvia bowleyana HOM05D006533 ORTHO05D008625 1.4e-115 420.6 413 57.6
HPP92_005443 Vanilla planifolia HOM05D006533 ORTHO05D008625 2.0e-111 406.8 400 54.0
DCAR_009009 Daucus carota HOM05D006533 ORTHO05D008625 1.3e-110 404.1 355 62.0
CDE11G1068 Ceratophyllum demersum HOM05D006533 ORTHO05D004827 2.0e-103 380.2 364 56.3
Rhsim03G0221300 Rhododendron simsii HOM05D006533 ORTHO05D008625 6.6e-102 375.2 441 50.1
Os06g0114600 Oryza sativa ssp. japonica HOM05D006533 ORTHO05D008625 3.6e-100 369.4 356 53.1
Mapoly0015s0191 Marchantia polymorpha HOM05D006533 ORTHO05D008625 8.3e-97 358.2 470 44.7
SalBow4G1971 Salvia bowleyana HOM05D006533 ORTHO05D008625 5.1e-94 349.0 363 55.9
Pp3c15_5730 Physcomitrium patens HOM05D006533 ORTHO05D008625 9.5e-93 344.7 437 46.2
SMO340G0278 Selaginella moellendorffii HOM05D006533 ORTHO05D008625 5.2e-91 339.0 414 45.2
Hma1.2p1_0758F.1_g213747 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.2e-90 337.8 333 57.7
Zm00001eb268960 Zea mays HOM05D006533 ORTHO05D008625 5.8e-90 335.5 327 52.6
Hma1.2p1_0758F.1_g213741 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 8.4e-89 331.6 340 56.2
Hma1.2p1_0758F.1_g213730 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.4e-88 330.9 342 55.8
TPR.G22023 Trifolium pratense HOM05D006533 ORTHO05D008625 7.1e-88 328.6 205 80.0
QL09p024429 Quercus lobata HOM05D006533 ORTHO05D008625 3.5e-87 326.2 287 62.0
Hma1.2p1_0758F.1_g213704 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.9e-86 322.8 301 59.1
Hma1.2p1_0758F.1_g213725 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.3e-85 319.7 301 58.8
Hma1.2p1_0758F.1_g213746 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.3e-85 319.7 301 58.8
Hma1.2p1_3802F.1_g337637 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 3.3e-85 319.7 301 58.8
Psat2g075360 Pisum sativum HOM05D006533 ORTHO05D008625 7.6e-82 308.5 299 54.5
arahy.Tifrunner.gnm1.ann1.1W8L1U Arachis hypogaea HOM05D006533 ORTHO05D008625 3.5e-71 273.1 208 67.8
TPR.G37965 Trifolium pratense HOM05D006533 ORTHO05D008625 4.0e-67 259.6 274 52.6
SEGI_31434 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 3.8e-65 253.1 231 58.9
CBR_g24301 Chara braunii HOM05D006533 ORTHO05D008625 1.6e-52 211.1 599 29.9
FAN01G0029 Fragaria x ananassa HOM05D006533 ORTHO05D008625 2.6e-37 160.6 89 86.5
HPP92_005432 Vanilla planifolia HOM05D006533 ORTHO05D008625 1.3e-33 148.3 181 46.4
MBI06_g38701_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 4.7e-31 139.8 132 54.5
SEGI_03149 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 1.4e-27 128.3 202 40.1
MBI06_g38702_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 2.0e-21 107.8 125 49.6
MBI12_g01582_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 3.7e-20 103.6 109 50.5
Haze_04836 Corylus avellana HOM05D006533 ORTHO05D008625 2.0e-13 81.3 61 75.4
Hma1.2p1_0649F.1_g195356 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.3e-12 78.6 78 66.7
Hma1.2p1_0649F.1_g195390 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.3e-12 78.6 78 66.7
Hma1.2p1_3802F.1_g337632 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.3e-12 78.6 78 66.7
MBI05_g26894_MAGBIO Magnolia biondii HOM05D003110 ORTHO05D003585 5.5e-08 63.2 47 59.6
Rhsim12G0119200 Rhododendron simsii HOM05D006533 ORTHO05D338813 2.7e-07 60.8 56 55.4


User provided reference genes

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