Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G0998 Cannabis sativa HOM05D006918 ORTHO05D008525 1.2e-61 241.9 119 100.0
Haze_08532 Corylus avellana HOM05D006918 ORTHO05D008525 3.6e-42 177.2 119 72.3
Cfa019430 Carpinus fangiana HOM05D006918 ORTHO05D008525 4.7e-42 176.8 119 72.3
Dinv19625 Davidia involucrata HOM05D006918 ORTHO05D008525 6.1e-42 176.4 119 70.6
ClCG11G016340 Citrullus lanatus HOM05D006918 ORTHO05D008525 8.0e-42 176.0 119 68.9
CiPaw.12G045100 Carya illinoinensis HOM05D006918 ORTHO05D008525 1.0e-41 175.6 120 72.5
MD10G1198700 Malus domestica HOM05D006918 ORTHO05D008525 2.3e-41 174.5 119 70.6
Thecc.07G154400 Theobroma cacao HOM05D006918 ORTHO05D008525 3.0e-41 174.1 119 67.2
CsaV3_4G031810 Cucumis sativus L. HOM05D006918 ORTHO05D008525 5.2e-41 173.3 119 68.1
QL04p074473 Quercus lobata HOM05D006918 ORTHO05D008525 6.8e-41 172.9 120 70.0
Manes.14G015600 Manihot esculenta HOM05D006918 ORTHO05D008525 2.6e-40 171.0 119 64.7
CSS0032788 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 4.4e-40 170.2 119 68.9
Prupe.4G143000 Prunus persica HOM05D006918 ORTHO05D008525 7.5e-40 169.5 119 68.1
Sed0019951 Sechium edule HOM05D006918 ORTHO05D008525 7.5e-40 169.5 119 67.2
MELO3C010560.2 Cucumis melo HOM05D006918 ORTHO05D008525 1.7e-39 168.3 119 66.4
MD05G1216400 Malus domestica HOM05D006918 ORTHO05D008525 1.1e-38 165.6 119 67.2
CSS0007445 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 5.4e-38 163.3 119 65.5
RcHm_v2.0_Chr5g0026921 Rosa chinensis HOM05D006918 ORTHO05D008525 5.4e-38 163.3 119 67.2
CSS0011318 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 2.7e-37 161.0 119 64.7
FAN21G2086 Fragaria x ananassa HOM05D006918 ORTHO05D008525 2.7e-37 161.0 119 67.2
FAN21G2559 Fragaria x ananassa HOM05D006918 ORTHO05D008525 2.7e-37 161.0 119 67.2
FAN25G3485 Fragaria x ananassa HOM05D006918 ORTHO05D008525 2.7e-37 161.0 119 66.4
FvH4_3g15990 Fragaria vesca HOM05D006918 ORTHO05D008525 5.9e-37 159.8 119 66.4
FAN11G3197 Fragaria x ananassa HOM05D006918 ORTHO05D008525 5.9e-37 159.8 119 66.4
TAR627G0890 Trochodendron aralioides HOM05D006918 ORTHO05D008525 5.9e-37 159.8 111 68.5
Lj3g0009186 Lotus japonicus HOM05D006918 ORTHO05D008525 7.8e-37 159.5 121 67.8
Sabra11G0128500 Salix brachista HOM05D006918 ORTHO05D008525 7.8e-37 159.5 119 62.2
Potri.011G144300 Populus trichocarpa HOM05D006918 ORTHO05D008525 1.7e-36 158.3 119 62.2
Duzib187G0932 Durio zibethinus HOM05D006918 ORTHO05D008525 1.9e-35 154.8 119 63.0
Duzib187G1351 Durio zibethinus HOM05D006918 ORTHO05D008525 1.9e-35 154.8 119 63.0
Nn7g37872 Nelumbo nucifera HOM05D006918 ORTHO05D008525 4.3e-35 153.7 119 59.7
Sc03g0007940 Simmondsia chinensis HOM05D006918 ORTHO05D008525 4.3e-35 153.7 119 61.3
Gohir.D05G330400 Gossypium hirsutum HOM05D006918 ORTHO05D008525 7.3e-35 152.9 119 59.7
Gorai.009G354800 Gossypium raimondii HOM05D006918 ORTHO05D008525 7.3e-35 152.9 119 59.7
Potri.001G457300 Populus trichocarpa HOM05D006918 ORTHO05D008525 9.5e-35 152.5 119 58.8
Cc05_g15990 Coffea canephora HOM05D006918 ORTHO05D008525 1.2e-34 152.1 119 64.7
Sabra16G0310000 Salix brachista HOM05D006918 ORTHO05D008525 2.1e-34 151.4 119 58.0
Glyma.08G172400 Glycine max HOM05D006918 ORTHO05D008525 1.4e-33 148.7 121 62.0
Glyma.15G254900 Glycine max HOM05D006918 ORTHO05D008525 3.1e-33 147.5 121 61.2
Phvul.005G056300 Phaseolus vulgaris HOM05D006918 ORTHO05D008525 5.2e-33 146.7 121 61.2
Ah.04g163440 Amaranthus hybridus HOM05D006918 ORTHO05D008525 6.8e-33 146.4 113 63.7
EL10Ac4g08564 Beta vulgaris HOM05D006918 ORTHO05D008525 1.2e-32 145.6 113 61.9
Lalb_Chr25g0285091 Lupinus albus HOM05D006918 ORTHO05D008525 2.6e-32 144.4 119 62.2
PSO541G4556 Papaver somniferum HOM05D006918 ORTHO05D008525 4.4e-32 143.7 116 59.5
PSO675G9078 Papaver somniferum HOM05D006918 ORTHO05D008525 4.4e-32 143.7 116 59.5
Cpa.g.sc10.35 Carica papaya HOM05D006918 ORTHO05D008525 5.8e-32 143.3 121 59.5
VMungo1080G0996 Vigna mungo HOM05D006918 ORTHO05D008525 1.7e-31 141.7 121 60.3
Atru.chr12.2189 Acer truncatum HOM05D006918 ORTHO05D008525 2.2e-31 141.4 119 55.5
AUR62043059 Chenopodium quinoa HOM05D006918 ORTHO05D008525 3.7e-31 140.6 113 60.2
Eucgr.F03183 Eucalyptus grandis HOM05D006918 ORTHO05D008525 4.9e-31 140.2 119 57.1
AUR62044624 Chenopodium quinoa HOM05D006918 ORTHO05D008525 1.1e-30 139.0 113 59.3
DCAR_013746 Daucus carota HOM05D006918 ORTHO05D008525 3.2e-30 137.5 113 59.3
Nitab4.5_0008437g0030 Nicotiana tabacum HOM05D006918 ORTHO05D008525 1.2e-29 135.6 120 57.5
Ciclev10019503m.g Citrus clementina HOM05D006918 ORTHO05D008525 2.0e-29 134.8 116 57.8
TWI39G1081 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 2.0e-29 134.8 113 58.4
Oeu056983.1 Olea europaea HOM05D006918 ORTHO05D008525 3.5e-29 134.0 116 55.2
Aqoxy6G01201 Aquilegia oxysepala HOM05D006918 ORTHO05D008525 6.0e-29 133.3 117 55.6
PGSC0003DMG400022129 Solanum tuberosum HOM05D006918 ORTHO05D008525 6.0e-29 133.3 127 53.5
Migut.M01563 Erythranthe guttata HOM05D006918 ORTHO05D008525 1.3e-28 132.1 120 53.3
MSTRG.7057 Avicennia marina HOM05D006918 ORTHO05D008525 3.0e-28 131.0 115 56.5
DCAR_016820 Daucus carota HOM05D006918 ORTHO05D008525 5.0e-28 130.2 119 52.9
TWI38G1170 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 1.5e-27 128.6 115 54.8
Ca_03688_v3 Cicer arietinum L. HOM05D006918 ORTHO05D008525 2.5e-27 127.9 124 53.2
Lalb_Chr01g0007081 Lupinus albus HOM05D006918 ORTHO05D008525 3.3e-27 127.5 122 55.7
Lalb_Chr19g0133401 Lupinus albus HOM05D006918 ORTHO05D008525 3.3e-27 127.5 121 56.2
Lsat_1_v5_gn_7_72161 Lactuca sativa HOM05D006918 ORTHO05D008525 7.3e-27 126.3 119 53.8
Lj5A202T40 Lonicera japonica HOM05D006918 ORTHO05D008525 1.6e-26 125.2 121 57.9
Nitab4.5_0001749g0050 Nicotiana tabacum HOM05D006918 ORTHO05D008525 2.1e-26 124.8 126 50.8
TPR.G9758 Trifolium pratense HOM05D006918 ORTHO05D008525 3.6e-26 124.0 122 53.3
Medtr2g069680 Medicago truncatula HOM05D006918 ORTHO05D008525 4.7e-26 123.6 129 51.9
Solyc07g066390.1 Solanum lycopersicum HOM05D006918 ORTHO05D008525 4.7e-26 123.6 127 51.2
Sopen07g034560 Solanum pennellii HOM05D006918 ORTHO05D008525 4.7e-26 123.6 127 51.2
Peaxi162Scf00452g00086 Petunia axillaris HOM05D006918 ORTHO05D008525 3.1e-25 120.9 127 49.6
PGR031G3805 Punica granatum HOM05D006918 ORTHO05D008525 3.1e-25 120.9 131 52.7
TPR.G9735 Trifolium pratense HOM05D006918 ORTHO05D008525 2.0e-24 118.2 123 50.4
THA.LOC104808118 Tarenaya hassleriana HOM05D006918 ORTHO05D008525 2.6e-24 117.9 118 54.2
Lj5C202T5 Lonicera japonica HOM05D006918 ORTHO05D008525 7.5e-24 116.3 125 52.8
Rhsim04G0005900 Rhododendron simsii HOM05D006918 ORTHO05D008525 7.5e-24 116.3 122 50.0
TAR636G1403 Trochodendron aralioides HOM05D006918 ORTHO05D008525 3.7e-23 114.0 76 68.4
Dinv42519 Davidia involucrata HOM05D006918 ORTHO05D008525 2.4e-22 111.3 70 71.4
CAN.G943.32 Capsicum annuum HOM05D006918 ORTHO05D008525 9.2e-22 109.4 133 48.1
Psat1g002800 Pisum sativum HOM05D006918 ORTHO05D008525 1.6e-21 108.6 121 48.8
Thhalv10018334m.g Eutrema salsugineum HOM05D006918 ORTHO05D008525 2.1e-21 108.2 132 48.5
TPR.G9740 Trifolium pratense HOM05D006918 ORTHO05D008525 3.5e-21 107.5 117 48.7
CDE04G0465 Ceratophyllum demersum HOM05D006918 ORTHO05D008525 1.0e-20 105.9 70 64.3
Carub.0002s2595 Capsella rubella HOM05D006918 ORTHO05D008525 1.3e-20 105.5 127 49.6
AL2G39540 Arabidopsis lyrata HOM05D006918 ORTHO05D008525 1.7e-20 105.1 131 48.9
Sp5g34130 Schrenkiella parvula HOM05D006918 ORTHO05D008525 3.0e-20 104.4 132 47.7
CARHR072750 Cardamine hirsuta HOM05D006918 ORTHO05D008525 6.6e-20 103.2 134 45.5
AT1G79080 Arabidopsis thaliana HOM05D006918 ORTHO05D008525 1.1e-19 102.4 129 45.7
HanXRQChr05g0161001 Helianthus annuus HOM05D006918 ORTHO05D008525 4.3e-19 100.5 117 50.4
Aa31LG4G1910 Aethionema arabicum HOM05D001696 ORTHO05D001746 1.6e-18 98.6 129 46.5
BolC6t40313H Brassica oleracea HOM05D006918 ORTHO05D008525 2.8e-18 97.8 126 47.6
BcaC08g47472 Brassica carinata HOM05D006918 ORTHO05D008525 6.2e-18 96.7 122 47.5
C06p52950 Brassica napus HOM05D006918 ORTHO05D008525 6.2e-18 96.7 122 47.5
A07p44220 Brassica napus HOM05D006918 ORTHO05D008525 1.8e-17 95.1 122 46.7
BraA07t31930Z Brassica rapa HOM05D006918 ORTHO05D008525 2.3e-17 94.7 122 46.7
HPP92_013913 Vanilla planifolia HOM05D006918 ORTHO05D008525 1.9e-14 85.1 119 42.0
HPP92_013983 Vanilla planifolia HOM05D006918 ORTHO05D008525 3.2e-14 84.3 119 42.0
SGA_v2.0_scaffold7G03576 Striga asiatica HOM05D006918 ORTHO05D008525 5.4e-14 83.6 101 44.6
BcaB02g08665 Brassica carinata HOM05D006918 ORTHO05D008525 2.1e-13 81.6 120 40.8
BcaNung04908 Brassica carinata HOM05D006918 ORTHO05D008525 7.8e-13 79.7 91 44.0
ATR1098G023 Amborella trichopoda HOM05D006918 ORTHO05D008525 9.9e-08 62.8 42 66.7
Cfa019933 Carpinus fangiana HOM05D006918 ORTHO05D008525 4.2e-06 57.4 37 70.3


User provided reference genes

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