Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G0026 Cannabis sativa HOM05D006185 ORTHO05D007572 6.1e-111 404.1 190 100.0
CANSAT56G1413 Cannabis sativa HOM05D006185 ORTHO05D007572 2.8e-108 395.2 190 97.4
CANSAT56G3530 Cannabis sativa HOM05D006185 ORTHO05D007572 1.0e-105 386.7 191 96.3
CANSAT56G1917 Cannabis sativa HOM05D006185 ORTHO05D007572 2.2e-105 385.6 191 95.8
Prupe.7G195700 Prunus persica HOM05D006185 ORTHO05D007572 1.2e-87 326.6 189 78.8
ClCG03G014940 Citrullus lanatus HOM05D006185 ORTHO05D007572 3.6e-87 325.1 186 79.0
QL11p001224 Quercus lobata HOM05D006185 ORTHO05D007572 3.6e-87 325.1 189 78.3
CsaV3_1G041210 Cucumis sativus L. HOM05D006185 ORTHO05D007572 4.7e-87 324.7 186 78.5
Duzib150G0101 Durio zibethinus HOM05D006185 ORTHO05D007572 1.8e-86 322.8 190 77.4
Cpa.g.sc28.15 Carica papaya HOM05D006185 ORTHO05D007572 4.4e-85 318.2 190 74.2
Atru.chr7.1733 Acer truncatum HOM05D006185 ORTHO05D007572 2.2e-84 315.8 190 73.7
Duzib187G0940 Durio zibethinus HOM05D006185 ORTHO05D007572 2.2e-84 315.8 190 76.8
Dinv25540 Davidia involucrata HOM05D006185 ORTHO05D007572 4.9e-84 314.7 190 74.2
TWI63G0883 Tripterygium wilfordii HOM05D006185 ORTHO05D007572 8.3e-84 313.9 190 74.7
MELO3C015534.2 Cucumis melo HOM05D006185 ORTHO05D007572 1.1e-83 313.5 205 72.2
Peaxi162Scf00928g00132 Petunia axillaris HOM05D006185 ORTHO05D007572 1.1e-83 313.5 189 74.1
FAN26G0065 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.9e-83 312.8 187 74.9
FAN26G3397 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.9e-83 312.8 187 74.9
Thecc.09G074200 Theobroma cacao HOM05D006185 ORTHO05D007572 1.9e-83 312.8 190 77.4
Gohir.D05G035900 Gossypium hirsutum HOM05D006185 ORTHO05D007572 4.1e-83 311.6 190 75.3
Gorai.009G036500 Gossypium raimondii HOM05D006185 ORTHO05D007572 4.1e-83 311.6 190 75.3
Migut.L01579 Erythranthe guttata HOM05D006185 ORTHO05D007572 7.0e-83 310.8 189 73.5
Manes.03G041800 Manihot esculenta HOM05D006185 ORTHO05D007572 7.0e-83 310.8 190 74.2
COL.COLO4_18072 Corchorus olitorius HOM05D006185 ORTHO05D007572 9.2e-83 310.5 190 74.2
Potri.006G140000 Populus trichocarpa HOM05D006185 ORTHO05D007572 1.2e-82 310.1 190 75.3
Gohir.A05G034500 Gossypium hirsutum HOM05D006185 ORTHO05D007572 1.6e-82 309.7 190 74.7
Nitab4.5_0000073g0300 Nicotiana tabacum HOM05D006185 ORTHO05D007572 1.6e-82 309.7 188 73.9
Nitab4.5_0004234g0030 Nicotiana tabacum HOM05D006185 ORTHO05D007572 1.6e-82 309.7 188 73.4
Cfa002967 Carpinus fangiana HOM05D006185 ORTHO05D007572 2.7e-82 308.9 189 72.5
Ciclev10009607m.g Citrus clementina HOM05D006185 ORTHO05D007572 3.5e-82 308.5 190 75.3
CAN.G1661.20 Capsicum annuum HOM05D006185 ORTHO05D007572 4.6e-82 308.1 190 72.6
MD02G1095400 Malus domestica HOM05D006185 ORTHO05D007572 1.0e-81 307.0 189 76.7
GSVIVG01015050001 Vitis vinifera HOM05D006185 ORTHO05D007572 1.0e-81 307.0 190 73.2
Solyc12g009180.2 Solanum lycopersicum HOM05D006185 ORTHO05D007572 1.3e-81 306.6 187 73.3
Sopen12g004130 Solanum pennellii HOM05D006185 ORTHO05D007572 1.3e-81 306.6 187 72.7
Haze_26036 Corylus avellana HOM05D006185 ORTHO05D007572 1.7e-81 306.2 190 72.6
RcHm_v2.0_Chr2g0095441 Rosa chinensis HOM05D006185 ORTHO05D007572 1.7e-81 306.2 189 73.0
PGSC0003DMG400002903 Solanum tuberosum HOM05D006185 ORTHO05D007572 1.7e-81 306.2 187 72.7
Eucgr.C03305 Eucalyptus grandis HOM05D006185 ORTHO05D007572 3.9e-81 305.1 189 69.8
SGA_v2.0_scaffold296G47554 Striga asiatica HOM05D006185 ORTHO05D007572 8.6e-81 303.9 187 74.3
CiPaw.03G203800 Carya illinoinensis HOM05D006185 ORTHO05D007572 1.1e-80 303.5 190 70.5
FAN23G1580 Fragaria x ananassa HOM05D006185 ORTHO05D007572 1.5e-80 303.1 187 72.7
SalBow5G0266 Salvia bowleyana HOM05D006185 ORTHO05D007572 1.9e-80 302.8 187 72.7
FvH4_1g09020 Fragaria vesca HOM05D006185 ORTHO05D007572 3.3e-80 302.0 187 72.7
FAN19G1369 Fragaria x ananassa HOM05D006185 ORTHO05D007572 3.3e-80 302.0 187 72.7
Gorai.010G090200 Gossypium raimondii HOM05D006185 ORTHO05D007572 3.3e-80 302.0 186 75.3
Cc06_g12450 Coffea canephora HOM05D006185 ORTHO05D007572 9.5e-80 300.4 190 69.5
Ca_09309_v3 Cicer arietinum L. HOM05D006185 ORTHO05D007572 3.6e-79 298.5 188 71.3
EL10Ac8g19027 Beta vulgaris HOM05D006185 ORTHO05D007572 1.8e-78 296.2 186 74.2
vmacro17122 Vaccinium macrocarpon HOM05D006185 ORTHO05D007572 1.8e-78 296.2 189 69.8
Sc06g0006920 Simmondsia chinensis HOM05D006185 ORTHO05D007572 2.3e-78 295.8 186 72.6
Sabra06G0109300 Salix brachista HOM05D006185 ORTHO05D007572 8.9e-78 293.9 221 63.8
Rhsim05G0005100 Rhododendron simsii HOM05D006185 ORTHO05D007572 1.5e-77 293.1 190 70.5
Oeu062247.1 Olea europaea HOM05D006185 ORTHO05D007572 2.6e-77 292.4 191 69.6
Psat7g057800 Pisum sativum HOM05D006185 ORTHO05D007572 2.6e-77 292.4 187 71.1
Thhalv10008865m.g Eutrema salsugineum HOM05D006185 ORTHO05D007572 9.8e-77 290.4 190 69.5
THA.LOC104799837 Tarenaya hassleriana HOM05D006185 ORTHO05D007572 9.8e-77 290.4 190 68.9
TAR624G1115 Trochodendron aralioides HOM05D006185 ORTHO05D007572 9.8e-77 290.4 191 70.7
Ah.09g229250 Amaranthus hybridus HOM05D006185 ORTHO05D007572 1.3e-76 290.0 186 71.5
Phvul.003G129600 Phaseolus vulgaris HOM05D006185 ORTHO05D007572 2.9e-76 288.9 190 70.0
Carub.0001s1876 Capsella rubella HOM05D006185 ORTHO05D007572 3.7e-76 288.5 190 68.9
AL1G31710 Arabidopsis lyrata HOM05D006185 ORTHO05D007572 4.9e-76 288.1 190 68.4
BraA08t34935Z Brassica rapa HOM05D006185 ORTHO05D007572 4.9e-76 288.1 190 67.9
PGR044G1997 Punica granatum HOM05D006185 ORTHO05D007572 4.9e-76 288.1 190 67.9
TPR.G12562 Trifolium pratense HOM05D006185 ORTHO05D007572 4.9e-76 288.1 188 69.1
VMungo1215G2404 Vigna mungo HOM05D006185 ORTHO05D007572 4.9e-76 288.1 190 70.0
A08p30000 Brassica napus HOM05D006185 ORTHO05D007572 6.4e-76 287.7 190 67.4
DCAR_010492 Daucus carota HOM05D006185 ORTHO05D007572 6.4e-76 287.7 185 70.3
AT1G19130 Arabidopsis thaliana HOM05D006185 ORTHO05D007572 1.1e-75 287.0 190 68.4
C08p19220 Brassica napus HOM05D006185 ORTHO05D007572 1.1e-75 287.0 190 67.9
BolC8t49541H Brassica oleracea HOM05D006185 ORTHO05D007572 1.1e-75 287.0 190 67.9
BcaC07g38980 Brassica carinata HOM05D006185 ORTHO05D007572 2.4e-75 285.8 190 67.4
CSS0028340 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 4.1e-75 285.0 189 68.8
Hund26074 Selenicereus undatus HOM05D006185 ORTHO05D007572 4.1e-75 285.0 186 69.9
CSS0016181 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 7.1e-75 284.3 188 69.1
Sc08g0009100 Simmondsia chinensis HOM05D006185 ORTHO05D007572 7.1e-75 284.3 189 67.2
BcaB03g12935 Brassica carinata HOM05D006185 ORTHO05D007572 1.6e-74 283.1 191 67.5
ECA236G4868 Erigeron canadensis HOM05D006185 ORTHO05D007572 1.6e-74 283.1 188 67.6
Lj4g0025093 Lotus japonicus HOM05D006185 ORTHO05D007572 2.1e-74 282.7 189 69.8
Lalb_Chr07g0181271 Lupinus albus HOM05D006185 ORTHO05D007572 2.1e-74 282.7 188 69.1
Aa31LG7G3870 Aethionema arabicum HOM05D006185 ORTHO05D007572 2.7e-74 282.3 190 67.9
Lj7A688T82 Lonicera japonica HOM05D006185 ORTHO05D007572 3.5e-74 282.0 192 68.8
Medtr4g125100 Medicago truncatula HOM05D006185 ORTHO05D007572 3.5e-74 282.0 189 67.2
Glyma.13G111600 Glycine max HOM05D006185 ORTHO05D007572 1.0e-73 280.4 193 66.8
HanXRQChr04g0125931 Helianthus annuus HOM05D006185 ORTHO05D007572 1.3e-73 280.0 189 68.8
Lsat_1_v5_gn_8_85701 Lactuca sativa HOM05D006185 ORTHO05D007572 5.1e-73 278.1 190 66.8
Hund26091 Selenicereus undatus HOM05D006185 ORTHO05D007572 8.6e-73 277.3 190 67.4
Eucgr.C00790 Eucalyptus grandis HOM05D006185 ORTHO05D007572 6.2e-71 271.2 190 64.7
Actinidia30236 Actinidia chinensis HOM05D006185 ORTHO05D007572 1.4e-70 270.0 228 56.6
AUR62028304 Chenopodium quinoa HOM05D006185 ORTHO05D007572 5.2e-70 268.1 186 64.5
Nn6g35681 Nelumbo nucifera HOM05D006185 ORTHO05D007572 1.2e-69 266.9 188 66.0
EL10Ac8g18996 Beta vulgaris HOM05D006185 ORTHO05D007572 2.0e-69 266.2 190 64.2
unitig_699.g19263 Utricularia gibba HOM05D000454 ORTHO05D007572 2.0e-69 266.2 184 64.7
MBI13_g00698_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 1.4e-67 260.0 189 66.1
AUR62025298 Chenopodium quinoa HOM05D006185 ORTHO05D007572 2.4e-67 259.2 186 62.9
HanXRQChr06g0168681 Helianthus annuus HOM05D006185 ORTHO05D007572 2.4e-67 259.2 184 63.6
Aqoxy7G04191 Aquilegia oxysepala HOM05D006185 ORTHO05D007572 5.4e-67 258.1 191 64.9
Sed0027040 Sechium edule HOM05D006185 ORTHO05D007572 1.2e-66 256.9 146 77.4
Nn5g27974 Nelumbo nucifera HOM05D006185 ORTHO05D007572 1.6e-66 256.5 188 64.4
AUR62028278 Chenopodium quinoa HOM05D006185 ORTHO05D007572 6.0e-66 254.6 186 65.6
ECA236G2592 Erigeron canadensis HOM05D006185 ORTHO05D007572 6.0e-66 254.6 185 63.2
AUR62025276 Chenopodium quinoa HOM05D006185 ORTHO05D007572 3.3e-64 248.8 145 77.2
Lsat_1_v5_gn_8_85721 Lactuca sativa HOM05D006185 ORTHO05D007572 2.8e-63 245.7 185 61.1
Lalb_Chr12g0200241 Lupinus albus HOM05D006185 ORTHO05D007572 3.6e-63 245.4 187 62.0
Zm00001eb040490 Zea mays HOM05D006185 ORTHO05D007572 1.8e-62 243.0 185 60.5
arahy.Tifrunner.gnm1.ann1.Y0H2IU Arachis hypogaea HOM05D006185 ORTHO05D007572 2.4e-62 242.7 188 62.2
arahy.Tifrunner.gnm1.ann1.85MSRM Arachis hypogaea HOM05D006185 ORTHO05D007572 4.0e-62 241.9 188 61.7
Gohir.A06G078100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 4.0e-62 241.9 186 64.0
Os08g0455800 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 4.0e-62 241.9 185 59.5
HPP92_004362 Vanilla planifolia HOM05D006185 ORTHO05D007572 6.8e-62 241.1 184 63.6
ATR0006G060 Amborella trichopoda HOM05D006185 ORTHO05D007572 1.5e-61 240.0 188 61.2
MBI19_g05291_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 9.9e-61 237.3 180 63.9
Os06g0198500 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 1.1e-56 223.8 185 57.3
Gohir.D06G077100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 3.3e-56 222.2 132 77.3
SEGI_13235 Sequoiadendron giganteum HOM05D006185 ORTHO05D007572 6.2e-55 218.0 186 57.5
MBI13_g47248_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 1.1e-54 217.2 189 58.2
Mapoly0007s0060 Marchantia polymorpha HOM05D006185 ORTHO05D007572 9.9e-53 210.7 180 56.7
SMO340G0144 Selaginella moellendorffii HOM05D006185 ORTHO05D007572 8.4e-52 207.6 186 52.2
Pp3c9_22400 Physcomitrium patens HOM05D006185 ORTHO05D007572 1.1e-51 207.2 188 51.6
MSTRG.26479 Avicennia marina HOM05D006185 ORTHO05D007572 2.5e-40 169.5 111 68.5
Ah.14g084750 Amaranthus hybridus HOM05D006185 ORTHO05D007572 4.3e-32 142.1 110 58.2
FAN28G1197 Fragaria x ananassa HOM05D006185 ORTHO05D007572 4.8e-31 138.7 82 72.0
CARHR019730 Cardamine hirsuta HOM05D006185 ORTHO05D007572 7.6e-29 131.3 82 72.0
MBI14_g46913_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 8.7e-25 117.9 99 56.6
Os06g0198600 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 1.0e-20 104.4 116 50.0
Eucgr.C00789 Eucalyptus grandis HOM05D006185 ORTHO05D007572 3.6e-18 95.9 87 49.4
BcaB02g10882 Brassica carinata HOM05D006185 ORTHO05D007572 2.9e-12 76.3 78 47.4


User provided reference genes

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