Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G2854 Cannabis sativa HOM05D005995 ORTHO05D007362 6.0e-84 314.3 178 100.0
Glyma.11G168600 Glycine max HOM05D005995 ORTHO05D007362 2.3e-67 259.2 176 78.4
CiPaw.14G056700 Carya illinoinensis HOM05D005995 ORTHO05D007362 1.5e-66 256.5 174 75.9
QL01p039263 Quercus lobata HOM05D005995 ORTHO05D007362 4.7e-65 251.5 176 73.9
arahy.Tifrunner.gnm1.ann1.SCP5PP Arachis hypogaea HOM05D005995 ORTHO05D007362 1.8e-64 249.6 178 73.6
Phvul.006G070800 Phaseolus vulgaris HOM05D005995 ORTHO05D007362 2.4e-64 249.2 173 74.0
Thecc.09G353200 Theobroma cacao HOM05D005995 ORTHO05D007362 2.4e-64 249.2 174 75.3
VMungo0540G0986 Vigna mungo HOM05D005995 ORTHO05D007362 2.4e-64 249.2 173 74.0
Haze_24375 Corylus avellana HOM05D005995 ORTHO05D007362 1.5e-63 246.5 183 71.6
Cc01_g14560 Coffea canephora HOM05D005995 ORTHO05D007362 2.6e-63 245.7 174 73.0
FvH4_3g39150 Fragaria vesca HOM05D005995 ORTHO05D007362 2.6e-63 245.7 177 78.0
RcHm_v2.0_Chr5g0070551 Rosa chinensis HOM05D005995 ORTHO05D007362 2.6e-63 245.7 177 78.5
Cpa.g.sc2.418 Carica papaya HOM05D005995 ORTHO05D007362 4.4e-63 245.0 174 73.0
Duzib170G0863 Durio zibethinus HOM05D005995 ORTHO05D007362 4.4e-63 245.0 173 75.1
Ciclev10029374m.g Citrus clementina HOM05D005995 ORTHO05D007362 7.6e-63 244.2 177 70.6
Potri.001G279700 Populus trichocarpa HOM05D005995 ORTHO05D007362 7.6e-63 244.2 173 74.0
FAN25G2223 Fragaria x ananassa HOM05D005995 ORTHO05D007362 1.3e-62 243.4 177 72.3
FAN11G1452 Fragaria x ananassa HOM05D005995 ORTHO05D007362 1.7e-62 243.0 177 77.4
CiPaw.13G073700 Carya illinoinensis HOM05D005995 ORTHO05D007362 2.9e-62 242.3 169 72.8
FAN21G0787 Fragaria x ananassa HOM05D005995 ORTHO05D007362 2.9e-62 242.3 177 71.2
Lalb_Chr20g0114841 Lupinus albus HOM05D005995 ORTHO05D007362 2.9e-62 242.3 176 76.7
Manes.17G003200 Manihot esculenta HOM05D005995 ORTHO05D007362 3.8e-62 241.9 174 75.3
TAR131G0002 Trochodendron aralioides HOM05D005995 ORTHO05D007362 8.4e-62 240.7 176 70.5
Ca_14969_v3 Cicer arietinum L. HOM05D005995 ORTHO05D007362 1.4e-61 240.0 170 71.2
Lalb_Chr18g0051191 Lupinus albus HOM05D005995 ORTHO05D007362 1.9e-61 239.6 175 81.1
Aqoxy4G02443 Aquilegia oxysepala HOM05D005995 ORTHO05D007362 2.4e-61 239.2 173 70.5
Dinv09649 Davidia involucrata HOM05D002227 ORTHO05D002337 2.4e-61 239.2 135 87.4
CSS0037016 Camellia sinensis var. sinensis HOM05D005995 ORTHO05D007362 4.2e-61 238.4 171 71.9
CSS0047754 Camellia sinensis var. sinensis HOM05D005995 ORTHO05D007362 4.2e-61 238.4 171 71.9
FAN16G3099 Fragaria x ananassa HOM05D005995 ORTHO05D007362 5.4e-61 238.0 177 70.6
MD03G1063100 Malus domestica HOM05D005995 ORTHO05D007362 7.1e-61 237.7 179 76.0
TAR623G0738 Trochodendron aralioides HOM05D005995 ORTHO05D007362 7.1e-61 237.7 176 69.3
GSVIVG01024692001 Vitis vinifera HOM05D005995 ORTHO05D007362 9.3e-61 237.3 183 71.0
Actinidia23218 Actinidia chinensis HOM05D005995 ORTHO05D007362 1.6e-60 236.5 137 84.7
COL.COLO4_11080 Corchorus olitorius HOM05D005995 ORTHO05D007362 2.1e-60 236.1 174 71.8
Cfa011735 Carpinus fangiana HOM05D005995 ORTHO05D007362 2.7e-60 235.7 183 69.4
Sopen06g033540 Solanum pennellii HOM05D005995 ORTHO05D007362 2.7e-60 235.7 175 70.9
PGSC0003DMG400030447 Solanum tuberosum HOM05D005995 ORTHO05D007362 2.7e-60 235.7 175 70.9
Lj6g0019722 Lotus japonicus HOM05D005995 ORTHO05D007362 3.5e-60 235.3 165 73.3
Nn2g14523 Nelumbo nucifera HOM05D005995 ORTHO05D007362 3.5e-60 235.3 174 69.0
Glyma.18G060000 Glycine max HOM05D005995 ORTHO05D007362 4.6e-60 235.0 164 73.2
arahy.Tifrunner.gnm1.ann1.6174C5 Arachis hypogaea HOM05D005995 ORTHO05D007362 6.0e-60 234.6 169 76.9
Potri.009G074400 Populus trichocarpa HOM05D005995 ORTHO05D007362 6.0e-60 234.6 183 68.9
MELO3C020526.2 Cucumis melo HOM05D005995 ORTHO05D007362 2.3e-59 232.6 176 71.0
CsaV3_1G036430 Cucumis sativus L. HOM05D005995 ORTHO05D007362 3.0e-59 232.3 176 70.5
Duzib168G2258 Durio zibethinus HOM05D005995 ORTHO05D007362 3.0e-59 232.3 174 71.3
Solyc06g082160.4 Solanum lycopersicum HOM05D005995 ORTHO05D007362 3.9e-59 231.9 175 69.7
ClCG03G000500 Citrullus lanatus HOM05D005995 ORTHO05D007362 5.1e-59 231.5 176 70.5
CAN.G1095.10 Capsicum annuum HOM05D005995 ORTHO05D007362 8.7e-59 230.7 175 69.1
Sabra09G0056500 Salix brachista HOM05D005995 ORTHO05D007362 8.7e-59 230.7 174 69.5
DCAR_015647 Daucus carota HOM05D005995 ORTHO05D007362 1.9e-58 229.6 173 68.2
Sabra16G0173300 Salix brachista HOM05D005995 ORTHO05D007362 1.9e-58 229.6 205 68.3
Sed0015986 Sechium edule HOM05D005995 ORTHO05D007362 2.5e-58 229.2 174 69.0
Psat0s2070g0120 Pisum sativum HOM05D005995 ORTHO05D007362 3.3e-58 228.8 172 67.4
Actinidia02782 Actinidia chinensis HOM05D005995 ORTHO05D007362 5.6e-58 228.0 133 84.2
ATR0681G053 Amborella trichopoda HOM05D005995 ORTHO05D007362 9.6e-58 227.3 179 65.9
TAR633G2447 Trochodendron aralioides HOM05D005995 ORTHO05D007362 9.6e-58 227.3 176 69.3
Hund06617 Selenicereus undatus HOM05D005995 ORTHO05D007362 1.3e-57 226.9 174 69.0
AUR62023851 Chenopodium quinoa HOM05D005995 ORTHO05D007362 1.6e-57 226.5 175 68.0
Nitab4.5_0013485g0010 Nicotiana tabacum HOM05D005995 ORTHO05D007362 2.1e-57 226.1 174 70.1
Oeu031050.1 Olea europaea HOM05D005995 ORTHO05D007362 2.1e-57 226.1 169 71.0
Medtr3g465040 Medicago truncatula HOM05D005995 ORTHO05D007362 2.8e-57 225.7 172 66.9
MSTRG.10034 Avicennia marina HOM05D005995 ORTHO05D007362 6.2e-57 224.6 176 64.2
EL10Ac3g05994 Beta vulgaris HOM05D005995 ORTHO05D007362 6.2e-57 224.6 175 67.4
Prupe.6G053100 Prunus persica HOM05D005995 ORTHO05D007362 6.2e-57 224.6 178 75.8
PGR031G2980 Punica granatum HOM05D005995 ORTHO05D007362 1.1e-56 223.8 171 67.3
Gohir.A13G233500 Gossypium hirsutum HOM05D005995 ORTHO05D007362 1.8e-56 223.0 132 83.3
Rhsim13G0066700 Rhododendron simsii HOM05D005995 ORTHO05D007362 3.1e-56 222.2 165 70.3
Sp6g20270 Schrenkiella parvula HOM05D005995 ORTHO05D007362 5.3e-56 221.5 174 64.4
Eucgr.B02232 Eucalyptus grandis HOM05D005995 ORTHO05D007362 9.0e-56 220.7 136 80.1
TPR.G32896 Trifolium pratense HOM05D005995 ORTHO05D007362 2.0e-55 219.5 173 68.2
MD11G1066600 Malus domestica HOM05D005995 ORTHO05D007362 3.4e-55 218.8 174 76.4
vmacro02942 Vaccinium macrocarpon HOM05D005995 ORTHO05D007362 7.6e-55 217.6 165 69.1
AL8G34810 Arabidopsis lyrata HOM05D005995 ORTHO05D007362 1.4e-53 213.4 174 60.9
AT5G58575 Arabidopsis thaliana HOM05D005995 ORTHO05D007362 1.9e-53 213.0 168 63.1
CARHR272410 Cardamine hirsuta HOM05D005995 ORTHO05D007362 4.2e-53 211.8 174 60.3
ECA248G1932 Erigeron canadensis HOM05D005995 ORTHO05D007362 4.2e-53 211.8 133 77.4
Migut.N00147 Erythranthe guttata HOM05D005995 ORTHO05D007362 4.2e-53 211.8 172 64.0
PSO017G3188 Papaver somniferum HOM05D005995 ORTHO05D007362 7.1e-53 211.1 134 77.6
Thhalv10014805m.g Eutrema salsugineum HOM05D005995 ORTHO05D007362 1.6e-52 209.9 134 76.1
Peaxi162Scf00540g00015 Petunia axillaris HOM05D005995 ORTHO05D007362 1.6e-52 209.9 168 66.1
PSO170G4292 Papaver somniferum HOM05D005995 ORTHO05D007362 2.1e-52 209.5 132 78.0
CDE10G1344 Ceratophyllum demersum HOM05D005995 ORTHO05D007362 2.7e-52 209.1 172 62.8
BcaC01g06637 Brassica carinata HOM05D005995 ORTHO05D007362 3.5e-52 208.8 134 73.9
A03p12120 Brassica napus HOM05D005995 ORTHO05D007362 3.5e-52 208.8 134 73.9
BraA03t10524Z Brassica rapa HOM05D005995 ORTHO05D007362 3.5e-52 208.8 134 73.9
Carub.0008s1918 Capsella rubella HOM05D005995 ORTHO05D007362 4.6e-52 208.4 174 59.8
BcaB01g04505 Brassica carinata HOM05D005995 ORTHO05D007362 6.0e-52 208.0 135 73.3
HanXRQChr11g0334701 Helianthus annuus HOM05D005995 ORTHO05D007362 7.9e-52 207.6 137 77.4
BolC3t13867H Brassica oleracea HOM05D005995 ORTHO05D007362 1.3e-51 206.8 134 73.1
Nitab4.5_0002043g0030 Nicotiana tabacum HOM05D005995 ORTHO05D007362 1.8e-51 206.5 174 65.5
Sc06g0010410 Simmondsia chinensis HOM05D005995 ORTHO05D007362 3.0e-51 205.7 129 78.3
SGA_v2.0_scaffold371G50155 Striga asiatica HOM05D005995 ORTHO05D007362 8.7e-51 204.1 155 65.8
Gohir.D13G239100 Gossypium hirsutum HOM05D005995 ORTHO05D007362 1.9e-50 203.0 135 77.8
Gorai.013G270000 Gossypium raimondii HOM05D005995 ORTHO05D007362 1.9e-50 203.0 135 77.8
MBI03_g03955_MAGBIO Magnolia biondii HOM05D005995 ORTHO05D007362 1.9e-50 203.0 118 83.9
Lsat_1_v5_gn_5_173181 Lactuca sativa HOM05D005995 ORTHO05D007362 2.5e-50 202.6 130 77.7
Atru.chr3.4142 Acer truncatum HOM05D005995 ORTHO05D007362 3.3e-50 202.2 235 51.9
THA.LOC104799390 Tarenaya hassleriana HOM05D005995 ORTHO05D007362 3.3e-50 202.2 179 59.8
Aa31LG11G350 Aethionema arabicum HOM05D005995 ORTHO05D007362 1.8e-48 196.4 134 71.6
BcaNung06849 Brassica carinata HOM05D002227 ORTHO05D007362 2.4e-48 196.1 135 70.4
CDE10G0962 Ceratophyllum demersum HOM05D005995 ORTHO05D007362 4.0e-48 195.3 164 62.2
Lj1P130T21 Lonicera japonica HOM05D005995 ORTHO05D007362 5.3e-48 194.9 106 87.7
HPP92_012020 Vanilla planifolia HOM05D005995 ORTHO05D007362 9.9e-47 190.7 175 60.6
MD11G1066800 Malus domestica HOM05D005995 ORTHO05D007362 2.9e-46 189.1 154 65.6
MD11G1152800 Malus domestica HOM05D005995 ORTHO05D007362 9.3e-45 184.1 114 78.1
unitig_62.g23487 Utricularia gibba HOM05D005995 ORTHO05D007362 1.2e-44 183.7 176 59.1
TWI79G0924 Tripterygium wilfordii HOM05D005995 ORTHO05D007362 6.7e-43 177.9 178 55.6
SEGI_16655 Sequoiadendron giganteum HOM05D005995 ORTHO05D007362 5.3e-40 168.3 143 61.5
TWI31G1135 Tripterygium wilfordii HOM05D005995 ORTHO05D007362 5.3e-40 168.3 134 64.9
Sed0014404 Sechium edule HOM05D005995 ORTHO05D007362 6.9e-40 167.9 171 59.6
AUR62002337 Chenopodium quinoa HOM05D005995 ORTHO05D007362 3.5e-36 155.6 124 62.9
Mapoly0008s0254 Marchantia polymorpha HOM05D005995 ORTHO05D007362 1.8e-35 153.3 137 57.7
C03p14210 Brassica napus HOM05D005995 ORTHO05D007362 6.7e-35 151.4 113 63.7
Gohir.A05G107700 Gossypium hirsutum HOM05D005995 ORTHO05D007362 4.1e-32 142.1 165 52.1
Pp3c7_14690 Physcomitrium patens HOM05D005995 ORTHO05D007362 4.1e-32 142.1 122 62.3
Os05g0351500 Oryza sativa ssp. japonica HOM05D005995 ORTHO05D007362 5.3e-32 141.7 174 45.4
Zm00001eb286290 Zea mays HOM05D005995 ORTHO05D007362 4.5e-31 138.7 138 52.2
BcaC01g06639 Brassica carinata HOM05D005995 ORTHO05D007362 2.7e-28 129.4 119 58.0
Gohir.D05G107900 Gossypium hirsutum HOM05D005995 ORTHO05D007362 3.0e-27 125.9 165 49.1
Pp3c11_11530 Physcomitrium patens HOM05D001687 ORTHO05D001608 3.0e-27 125.9 112 58.9
SMO358G0374 Selaginella moellendorffii HOM05D005995 ORTHO05D007362 1.9e-26 123.2 98 63.3
AagrBONN_evm.TU.Sc2ySwM_344.2127 Anthoceros agrestis HOM05D005995 ORTHO05D007362 8.2e-25 117.9 104 57.7
Gorai.009G112000 Gossypium raimondii HOM05D005995 ORTHO05D007362 3.4e-23 112.5 110 59.1
MD11G1153100 Malus domestica HOM05D005995 ORTHO05D007362 1.7e-22 110.2 80 67.5
Actinidia32626 Actinidia chinensis HOM05D005995 ORTHO05D007362 1.9e-21 106.7 70 78.6
HPP92_013780 Vanilla planifolia HOM05D005995 ORTHO05D007362 7.2e-21 104.8 85 63.5
CBR_g49952 Chara braunii HOM05D000019 ORTHO05D000002 1.3e-17 94.0 137 41.6
MD11G1071300 Malus domestica HOM05D005995 ORTHO05D007362 5.0e-14 82.0 82 65.9
Cre17.g719550 Chlamydomonas reinhardtii HOM05D005995 ORTHO05D007362 4.7e-12 75.5 57 57.9
Pp3c4_14820 Physcomitrium patens HOM05D005995 ORTHO05D311899 5.3e-08 62.0 126 37.3
MD11G1071400 Malus domestica HOM05D005995 ORTHO05D007362 2.6e-07 59.7 42 76.2
Medtr6g460490 Medicago truncatula HOM05D005995 ORTHO05D007362 2.6e-07 59.7 35 77.1
MCO04G081 Micromonas commoda HOM05D005995 ORTHO05D007362 2.9e-06 56.2 124 33.9


User provided reference genes

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