Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G2413 Cannabis sativa HOM05D006474 ORTHO05D007994 5.8e-230 800.4 378 100.0
Aqoxy7G02891 Aquilegia oxysepala HOM05D006474 ORTHO05D007994 1.0e-149 533.9 332 72.0
RcHm_v2.0_Chr4g0398871 Rosa chinensis HOM05D006474 ORTHO05D007994 1.7e-149 533.1 378 66.4
GSVIVG01029282001 Vitis vinifera HOM05D006474 ORTHO05D007994 1.1e-148 530.4 332 71.7
Haze_22046 Corylus avellana HOM05D006474 ORTHO05D007994 1.5e-148 530.0 399 64.4
QL02p064597 Quercus lobata HOM05D006474 ORTHO05D007994 1.5e-148 530.0 338 71.9
Glyma.17G057700 Glycine max HOM05D006474 ORTHO05D007994 2.5e-148 529.3 340 70.9
Cpa.g.sc115.63 Carica papaya HOM05D006474 ORTHO05D007994 3.3e-148 528.9 354 68.6
Potri.006G072800 Populus trichocarpa HOM05D006474 ORTHO05D007994 4.3e-148 528.5 338 70.7
CiPaw.07G199100 Carya illinoinensis HOM05D006474 ORTHO05D007994 5.6e-148 528.1 331 72.2
Ca_21263_v3 Cicer arietinum L. HOM05D006474 ORTHO05D007994 2.1e-147 526.2 390 66.7
Lj4g0020492 Lotus japonicus HOM05D006474 ORTHO05D007994 2.8e-147 525.8 342 70.5
TAR383G1087 Trochodendron aralioides HOM05D006474 ORTHO05D007994 3.6e-147 525.4 351 67.5
Medtr4g127130 Medicago truncatula HOM05D006474 ORTHO05D007994 1.4e-146 523.5 384 65.4
FvH4_4g06930 Fragaria vesca HOM05D006474 ORTHO05D007994 3.1e-146 522.3 363 66.7
PGR142G0270 Punica granatum HOM05D006474 ORTHO05D007994 3.1e-146 522.3 333 72.1
arahy.Tifrunner.gnm1.ann1.HVXZ0P Arachis hypogaea HOM05D006474 ORTHO05D007994 8.9e-146 520.8 333 70.3
FAN07G0584 Fragaria x ananassa HOM05D006474 ORTHO05D007994 8.9e-146 520.8 363 66.1
DCAR_020143 Daucus carota HOM05D006474 ORTHO05D007994 2.6e-145 519.2 331 70.1
vmacro20800 Vaccinium macrocarpon HOM05D006474 ORTHO05D007994 2.6e-145 519.2 365 66.0
TPR.G5392 Trifolium pratense HOM05D006474 ORTHO05D007994 3.4e-145 518.8 387 65.1
Actinidia38505 Actinidia chinensis HOM05D006474 ORTHO05D007994 4.4e-145 518.5 343 67.3
Sabra06G0054200 Salix brachista HOM05D006474 ORTHO05D007994 4.4e-145 518.5 338 69.8
Eucgr.C00087 Eucalyptus grandis HOM05D006474 ORTHO05D007994 5.8e-145 518.1 333 69.4
FAN12G2823 Fragaria x ananassa HOM05D006474 ORTHO05D007994 5.8e-145 518.1 363 66.1
FAN17G1111 Fragaria x ananassa HOM05D006474 ORTHO05D007994 2.2e-144 516.2 363 65.6
MD13G1241100 Malus domestica HOM05D006474 ORTHO05D007994 3.7e-144 515.4 376 63.6
TWI32G0724 Tripterygium wilfordii HOM05D006474 ORTHO05D007994 3.7e-144 515.4 344 67.7
Nn8g40661 Nelumbo nucifera HOM05D006474 ORTHO05D007994 4.9e-144 515.0 344 68.9
Thecc.04G204000 Theobroma cacao HOM05D006474 ORTHO05D007994 1.9e-143 513.1 333 71.5
Lalb_Chr07g0180731 Lupinus albus HOM05D006474 ORTHO05D007994 4.1e-143 511.9 332 69.6
Manes.06G017600 Manihot esculenta HOM05D006474 ORTHO05D007994 4.1e-143 511.9 333 69.4
PGSC0003DMG400019888 Solanum tuberosum HOM05D006474 ORTHO05D007994 4.1e-143 511.9 332 69.0
Sc14g0003050 Simmondsia chinensis HOM05D006474 ORTHO05D007994 5.4e-143 511.5 329 69.9
Ciclev10008481m.g Citrus clementina HOM05D006474 ORTHO05D007994 1.2e-142 510.4 381 63.5
HanXRQChr06g0181391 Helianthus annuus HOM05D006474 ORTHO05D007994 1.6e-142 510.0 385 61.0
Nitab4.5_0004916g0010 Nicotiana tabacum HOM05D006474 ORTHO05D007994 3.5e-142 508.8 332 68.7
Sopen07g004200 Solanum pennellii HOM05D006474 ORTHO05D007994 4.6e-142 508.4 332 69.0
Gorai.012G008200 Gossypium raimondii HOM05D006474 ORTHO05D007994 7.8e-142 507.7 380 63.7
Psat4g014320 Pisum sativum HOM05D006474 ORTHO05D007994 7.8e-142 507.7 332 69.9
Nitab4.5_0000028g0400 Nicotiana tabacum HOM05D006474 ORTHO05D007994 2.3e-141 506.1 333 68.8
MELO3C009992.2 Cucumis melo HOM05D006474 ORTHO05D007994 3.0e-141 505.8 370 63.5
ECA236G3875 Erigeron canadensis HOM05D006474 ORTHO05D007994 3.9e-141 505.4 340 64.4
Gohir.A05G408600 Gossypium hirsutum HOM05D006474 ORTHO05D007994 3.9e-141 505.4 380 63.2
Solyc07g008310.3 Solanum lycopersicum HOM05D006474 ORTHO05D007994 3.3e-140 502.3 355 65.1
ClCG03G011950 Citrullus lanatus HOM05D006474 ORTHO05D007994 5.6e-140 501.5 342 66.7
Cc01_g11810 Coffea canephora HOM05D006474 ORTHO05D007994 7.3e-140 501.1 332 68.1
CARHR237790 Cardamine hirsuta HOM05D006474 ORTHO05D007994 1.2e-139 500.4 346 67.3
CsaV3_1G043980 Cucumis sativus L. HOM05D006474 ORTHO05D007994 1.2e-139 500.4 386 61.7
CDE02G2399 Ceratophyllum demersum HOM05D006474 ORTHO05D007994 1.1e-138 497.3 371 63.6
COL.COLO4_37571 Corchorus olitorius HOM05D006474 ORTHO05D007994 1.4e-138 496.9 332 69.3
EL10Ac8g19287 Beta vulgaris HOM05D006474 ORTHO05D007994 2.3e-138 496.1 339 66.4
AUR62027431 Chenopodium quinoa HOM05D006474 ORTHO05D007994 3.1e-138 495.7 339 64.9
AT4G29890 Arabidopsis thaliana HOM05D006474 ORTHO05D007994 5.2e-138 495.0 364 64.8
Duzib170G0180 Durio zibethinus HOM05D006474 ORTHO05D007994 5.2e-138 495.0 358 64.5
PSO063G0500 Papaver somniferum HOM05D006474 ORTHO05D007994 5.2e-138 495.0 335 66.3
Thhalv10025251m.g Eutrema salsugineum HOM05D006474 ORTHO05D007994 6.8e-138 494.6 364 65.1
AL7G22360 Arabidopsis lyrata HOM05D006474 ORTHO05D007994 2.0e-137 493.0 333 67.9
Peaxi162Scf00046g00533 Petunia axillaris HOM05D006474 ORTHO05D007994 2.6e-137 492.7 331 66.8
Carub.0007s1076 Capsella rubella HOM05D006474 ORTHO05D007994 4.4e-137 491.9 364 64.0
Sed0005056 Sechium edule HOM05D006474 ORTHO05D007994 2.9e-136 489.2 342 65.5
Migut.J00779 Erythranthe guttata HOM05D006474 ORTHO05D007994 3.8e-136 488.8 341 64.5
HPP92_010297 Vanilla planifolia HOM05D006474 ORTHO05D007994 3.8e-136 488.8 331 65.9
MSTRG.5932 Avicennia marina HOM05D006474 ORTHO05D007994 6.4e-136 488.0 354 61.9
arahy.Tifrunner.gnm1.ann1.Z6GGIF Arachis hypogaea HOM05D006474 ORTHO05D007994 1.9e-135 486.5 387 61.8
Sp7g27700 Schrenkiella parvula HOM05D006474 ORTHO05D007994 1.9e-135 486.5 334 67.1
Oeu035450.1 Olea europaea HOM05D006474 ORTHO05D007994 9.2e-135 484.2 354 64.4
C07p57320 Brassica napus HOM05D006474 ORTHO05D007994 1.6e-134 483.4 346 65.3
Aa31LG2G20660 Aethionema arabicum HOM05D006474 ORTHO05D007994 2.7e-134 482.6 347 65.1
ATR0580G130 Amborella trichopoda HOM05D006474 ORTHO05D007994 2.3e-133 479.6 331 65.9
BolC7t46201H Brassica oleracea HOM05D006474 ORTHO05D007994 2.3e-133 479.6 346 64.7
Dinv41197 Davidia involucrata HOM05D006474 ORTHO05D007994 2.3e-133 479.6 358 63.7
MBI14_g10727_MAGBIO Magnolia biondii HOM05D006474 ORTHO05D007994 3.9e-133 478.8 351 63.0
Atru.BG.24.p Acer truncatum HOM05D006474 ORTHO05D007994 1.1e-132 477.2 319 70.2
SalBow1G1087 Salvia bowleyana HOM05D006474 ORTHO05D007994 2.5e-132 476.1 335 64.2
Sed0007392 Sechium edule HOM05D006474 ORTHO05D007994 2.5e-132 476.1 332 64.5
Zm00001eb273050 Zea mays HOM05D006474 ORTHO05D007994 4.3e-132 475.3 344 62.8
SGA_v2.0_scaffold112G31632 Striga asiatica HOM05D006474 ORTHO05D007994 2.8e-131 472.6 350 61.7
A03p59310 Brassica napus HOM05D006474 ORTHO05D007994 3.6e-131 472.2 347 64.0
BraA03t14988Z Brassica rapa HOM05D006474 ORTHO05D007994 3.6e-131 472.2 347 64.0
Os06g0698785 Oryza sativa ssp. japonica HOM05D006474 ORTHO05D007994 8.1e-131 471.1 354 60.5
Rhsim01G0114400 Rhododendron simsii HOM05D006474 ORTHO05D007994 3.1e-130 469.2 291 73.2
Prupe.1G072500 Prunus persica HOM05D006474 ORTHO05D007994 5.2e-130 468.4 355 62.8
Sopen07g004190 Solanum pennellii HOM05D006474 ORTHO05D007994 3.4e-129 465.7 332 65.1
BcaNung00499 Brassica carinata HOM05D006474 ORTHO05D007994 9.9e-129 464.2 340 65.0
Solyc07g008300.3 Solanum lycopersicum HOM05D006474 ORTHO05D007994 8.4e-128 461.1 334 64.1
HanXRQChr06g0181381 Helianthus annuus HOM05D006474 ORTHO05D007994 7.8e-126 454.5 390 55.9
Migut.J00780 Erythranthe guttata HOM05D006474 ORTHO05D007994 2.3e-125 453.0 341 60.1
Gohir.D04G006800 Gossypium hirsutum HOM05D006474 ORTHO05D007994 3.3e-124 449.1 380 58.9
Lsat_1_v5_gn_8_68301 Lactuca sativa HOM05D006474 ORTHO05D007994 7.6e-121 438.0 356 58.4
CAN.G403.4 Capsicum annuum HOM05D006474 ORTHO05D007994 6.0e-118 428.3 306 65.0
Ah.14g085320 Amaranthus hybridus HOM05D006474 ORTHO05D007994 1.1e-116 424.1 291 66.0
PSO170G4238 Papaver somniferum HOM05D006474 ORTHO05D007994 9.0e-114 414.5 286 65.4
SMO196G0177 Selaginella moellendorffii HOM05D006474 ORTHO05D007994 3.2e-111 406.0 326 55.8
AagrBONN_evm.TU.Sc2ySwM_117.1622 Anthoceros agrestis HOM05D006474 ORTHO05D007994 5.5e-111 405.2 333 55.6
AUR62032506 Chenopodium quinoa HOM05D006474 ORTHO05D007994 4.6e-110 402.1 336 53.6
Phvul.003G140100 Phaseolus vulgaris HOM05D006474 ORTHO05D007994 1.3e-109 400.6 261 68.2
AUR62031264 Chenopodium quinoa HOM05D006474 ORTHO05D007994 1.8e-109 400.2 274 65.3
AUR62043230 Chenopodium quinoa HOM05D006474 ORTHO05D007994 4.3e-108 395.6 336 52.7
Pp3c13_13580 Physcomitrium patens HOM05D006474 ORTHO05D007994 5.3e-106 388.7 345 52.8
Lju50A4G45 Lonicera japonica HOM05D006474 ORTHO05D007994 1.1e-103 380.9 272 66.2
Mapoly0089s0013 Marchantia polymorpha HOM05D006474 ORTHO05D007994 5.3e-98 362.1 345 48.7
EL10Ac6g13937 Beta vulgaris HOM05D006474 ORTHO05D007994 2.9e-96 356.3 370 46.5
Cfa013469 Carpinus fangiana HOM05D006474 ORTHO05D007994 4.2e-95 352.4 272 63.6
CSS0012665 Camellia sinensis var. sinensis HOM05D006474 ORTHO05D007994 3.7e-75 286.2 197 67.5
FAN22G2051 Fragaria x ananassa HOM05D006474 ORTHO05D007994 3.7e-75 286.2 326 47.9
MCO02G024 Micromonas commoda HOM05D006474 ORTHO05D007994 1.8e-74 283.9 335 43.3
Phvul.010G082000 Phaseolus vulgaris HOM05D006474 ORTHO05D007994 1.1e-63 248.1 201 58.2
Hund22985 Selenicereus undatus HOM05D006474 ORTHO05D007994 4.8e-59 232.6 247 49.8
Lsat_1_v5_gn_9_69680 Lactuca sativa HOM05D006474 ORTHO05D007994 4.5e-57 226.1 208 53.8
SEGI_01125 Sequoiadendron giganteum HOM05D006474 ORTHO05D007994 2.8e-46 190.3 131 64.9
PRCOL_00004194 Prasinoderma coloniale HOM05D006474 ORTHO05D007994 1.7e-43 181.0 424 28.8
Lsat_1_v5_gn_5_32380 Lactuca sativa HOM05D006474 ORTHO05D007994 3.7e-35 153.3 169 45.6
Phvul.011G131100 Phaseolus vulgaris HOM05D006474 ORTHO05D007994 1.4e-34 151.4 103 63.1
Ah.03g136670 Amaranthus hybridus HOM05D006474 ORTHO05D007994 5.4e-34 149.4 202 37.1
RcHm_v2.0_Chr4g0398881 Rosa chinensis HOM05D006474 ORTHO05D007994 4.1e-26 123.2 213 35.2
Gohir.A08G164600 Gossypium hirsutum HOM05D000075 ORTHO05D000264 2.6e-20 104.0 89 53.9
Oeu005633.1 Olea europaea HOM05D006474 ORTHO05D007994 1.8e-13 81.3 63 60.3
Lsat_1_v5_gn_3_77541 Lactuca sativa HOM05D006474 ORTHO05D007994 2.4e-10 70.9 65 52.3
Actinidia29962 Actinidia chinensis HOM05D006474 ORTHO05D007994 8.7e-08 62.4 40 62.5
SEGI_25707 Sequoiadendron giganteum HOM05D006474 ORTHO05D007994 2.5e-07 60.8 40 55.0


User provided reference genes

Program Settings