Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT54G1129 Cannabis sativa HOM05D000611 ORTHO05D000809 1.9e-75 285.8 149 100.0
CANSAT25G3146 Cannabis sativa HOM05D000611 ORTHO05D000809 8.9e-65 250.4 145 92.4
Rhsim01G0197600 Rhododendron simsii HOM05D000611 ORTHO05D000809 7.9e-13 77.8 89 44.9
FAN05G0188 Fragaria x ananassa HOM05D000611 ORTHO05D000809 1.5e-11 73.6 87 46.0
Dinv32137 Davidia involucrata HOM05D000611 ORTHO05D000809 1.9e-11 73.2 124 38.7
FvH4_6g26590 Fragaria vesca HOM05D000611 ORTHO05D000809 3.3e-11 72.4 104 41.3
FAN14G4558 Fragaria x ananassa HOM05D000611 ORTHO05D000809 3.3e-11 72.4 104 41.3
Ciclev10020214m.g Citrus clementina HOM05D000611 ORTHO05D000809 4.3e-11 72.0 111 36.9
FvH4_1g25060 Fragaria vesca HOM05D000611 ORTHO05D000809 4.3e-11 72.0 76 50.0
QL11p056147 Quercus lobata HOM05D002274 ORTHO05D000809 4.3e-11 72.0 73 52.1
QL01p018552 Quercus lobata HOM05D000611 ORTHO05D000809 7.4e-11 71.2 126 38.1
FAN09G1078 Fragaria x ananassa HOM05D000611 ORTHO05D000809 2.1e-10 69.7 76 48.7
QL07p018587 Quercus lobata HOM05D000611 ORTHO05D000809 2.1e-10 69.7 73 47.9
Potri.013G061500 Populus trichocarpa HOM05D000611 ORTHO05D000809 2.8e-10 69.3 73 52.1
Potri.019G038184 Populus trichocarpa HOM05D000611 ORTHO05D000809 3.7e-10 68.9 73 53.4
Thecc.05G244900 Theobroma cacao HOM05D000611 ORTHO05D000809 3.7e-10 68.9 133 35.3
FAN23G0451 Fragaria x ananassa HOM05D000611 ORTHO05D000809 4.8e-10 68.6 76 48.7
Haze_20458 Corylus avellana HOM05D000611 ORTHO05D000809 6.2e-10 68.2 133 34.6
Lalb_Chr02g0157271 Lupinus albus HOM05D000611 ORTHO05D000809 6.2e-10 68.2 76 48.7
Lj2g0026825 Lotus japonicus HOM05D000611 ORTHO05D000809 8.1e-10 67.8 136 39.0
Hma1.2p1_1288F.1_g273320 Hydrangea macrophylla HOM05D000611 ORTHO05D000809 1.1e-09 67.4 134 35.1
Prupe.3G134100 Prunus persica HOM05D000611 ORTHO05D000809 1.1e-09 67.4 73 50.7
Potri.019G037900 Populus trichocarpa HOM05D000611 ORTHO05D000809 1.4e-09 67.0 73 52.1
Oeu029558.1 Olea europaea HOM05D000611 ORTHO05D000809 1.8e-09 66.6 78 44.9
RcHm_v2.0_Chr2g0127561 Rosa chinensis HOM05D000611 ORTHO05D000809 1.8e-09 66.6 73 47.9
Hund10768 Selenicereus undatus HOM05D000611 ORTHO05D000809 1.8e-09 66.6 73 46.6
arahy.Tifrunner.gnm1.ann1.DX8RYA Arachis hypogaea HOM05D000611 ORTHO05D000809 2.4e-09 66.2 73 47.9
arahy.Tifrunner.gnm1.ann1.70YL0N Arachis hypogaea HOM05D000611 ORTHO05D000809 4.0e-09 65.5 73 47.9
Dinv25107 Davidia involucrata HOM05D000611 ORTHO05D000809 4.0e-09 65.5 89 42.7
Potri.019G038226 Populus trichocarpa HOM05D000611 ORTHO05D000809 4.0e-09 65.5 73 50.7
Lj1C1056G10 Lonicera japonica HOM05D000611 ORTHO05D000809 5.3e-09 65.1 78 46.2
Prupe.3G133800 Prunus persica HOM05D000611 ORTHO05D000809 5.3e-09 65.1 89 42.7
TAR633G1322 Trochodendron aralioides HOM05D000611 ORTHO05D000809 5.3e-09 65.1 73 46.6
Lalb_Chr21g0317261 Lupinus albus HOM05D000611 ORTHO05D000809 6.9e-09 64.7 73 50.7
Cfa008667 Carpinus fangiana HOM05D000611 ORTHO05D000809 9.0e-09 64.3 65 52.3
MD09G1243600 Malus domestica HOM05D000611 ORTHO05D000809 1.5e-08 63.5 73 47.9
Lj1A1057G22 Lonicera japonica HOM05D000611 ORTHO05D000809 2.0e-08 63.2 78 44.9
Manes.09G138400 Manihot esculenta HOM05D000611 ORTHO05D000809 2.6e-08 62.8 65 50.8
AUR62039714 Chenopodium quinoa HOM05D000611 ORTHO05D000809 3.4e-08 62.4 73 45.2
COL.COLO4_28606 Corchorus olitorius HOM05D000611 ORTHO05D000809 3.4e-08 62.4 73 45.2
Sabra13G0054400 Salix brachista HOM05D000611 ORTHO05D000809 3.4e-08 62.4 73 49.3
Dinv05571 Davidia involucrata HOM05D000611 ORTHO05D000809 4.5e-08 62.0 62 53.2
Phvul.004G051700 Phaseolus vulgaris HOM05D000611 ORTHO05D000809 4.5e-08 62.0 74 45.9
PGSC0003DMG400008709 Solanum tuberosum HOM05D000611 ORTHO05D000809 4.5e-08 62.0 126 31.0
Actinidia03940 Actinidia chinensis HOM05D000611 ORTHO05D000809 5.8e-08 61.6 73 45.2
Aqoxy1G00542 Aquilegia oxysepala HOM05D000611 ORTHO05D000809 5.8e-08 61.6 153 34.6
GSVIVG01029969001 Vitis vinifera HOM05D000611 ORTHO05D000809 5.8e-08 61.6 80 45.0
HPP92_001900 Vanilla planifolia HOM05D000611 ORTHO05D000809 7.6e-08 61.2 79 43.0
Eucgr.K01507 Eucalyptus grandis HOM05D000611 ORTHO05D000809 1.3e-07 60.5 73 39.7
MD17G1235600 Malus domestica HOM05D000611 ORTHO05D000809 1.3e-07 60.5 73 46.6
Solyc01g009190.3 Solanum lycopersicum HOM05D000611 ORTHO05D000809 1.3e-07 60.5 135 29.6
Sopen01g020540 Solanum pennellii HOM05D000611 ORTHO05D000809 1.3e-07 60.5 89 39.3
PSO384G2333 Papaver somniferum HOM05D000611 ORTHO05D000809 1.7e-07 60.1 123 33.3
Peaxi162Scf00061g03010 Petunia axillaris HOM05D000611 ORTHO05D000809 1.7e-07 60.1 85 40.0
Lsat_1_v5_gn_1_56161 Lactuca sativa HOM05D000611 ORTHO05D000809 2.9e-07 59.3 73 45.2
Solyc01g056620.4 Solanum lycopersicum HOM05D000611 ORTHO05D000809 2.9e-07 59.3 73 42.5
SGA_v2.0_scaffold31G12798 Striga asiatica HOM05D000611 ORTHO05D000809 2.9e-07 59.3 80 38.8
Nitab4.5_0001606g0050 Nicotiana tabacum HOM05D000611 ORTHO05D000809 3.8e-07 58.9 120 30.8
Sopen01g004660 Solanum pennellii HOM05D000611 ORTHO05D000809 3.8e-07 58.9 135 29.6
CsaV3_3G043040 Cucumis sativus L. HOM05D000611 ORTHO05D000809 4.9e-07 58.5 148 32.4
DCAR_009081 Daucus carota HOM05D000611 ORTHO05D000809 4.9e-07 58.5 65 50.8
Duzib128G1685 Durio zibethinus HOM05D000611 ORTHO05D000809 4.9e-07 58.5 140 32.1
Cc00_g06240 Coffea canephora HOM05D000611 ORTHO05D000809 6.4e-07 58.2 74 40.5
HanXRQChr11g0348881 Helianthus annuus HOM05D000611 ORTHO05D000809 6.4e-07 58.2 73 42.5
CAN.G245.2 Capsicum annuum HOM05D000611 ORTHO05D000809 8.4e-07 57.8 73 41.1
CAN.G794.12 Capsicum annuum HOM05D000611 ORTHO05D000809 8.4e-07 57.8 109 28.4
MBI11_g45238_MAGBIO Magnolia biondii HOM05D000611 ORTHO05D000809 8.4e-07 57.8 133 35.3
TWI60G0311 Tripterygium wilfordii HOM05D000611 ORTHO05D004334 8.4e-07 57.8 77 40.3
Gohir.A13G097600 Gossypium hirsutum HOM05D000611 ORTHO05D000809 1.1e-06 57.4 73 39.7
Gohir.D13G102300 Gossypium hirsutum HOM05D000611 ORTHO05D000809 1.1e-06 57.4 73 39.7
Gorai.013G114500 Gossypium raimondii HOM05D000611 ORTHO05D000809 1.1e-06 57.4 73 39.7
vmacro07555 Vaccinium macrocarpon HOM05D000611 ORTHO05D000809 1.4e-06 57.0 73 43.8
Actinidia37799 Actinidia chinensis HOM05D000611 ORTHO05D000809 1.9e-06 56.6 73 42.5
DCAR_012285 Daucus carota HOM05D000611 ORTHO05D000809 2.4e-06 56.2 135 31.9
Nn6g32381 Nelumbo nucifera HOM05D000611 ORTHO05D000809 2.4e-06 56.2 72 43.1
Psat5g113120 Pisum sativum HOM05D000611 ORTHO05D000809 2.4e-06 56.2 84 40.5
ECA248G2576 Erigeron canadensis HOM05D000611 ORTHO05D000809 5.5e-06 55.1 73 42.5
Psat5g113280 Pisum sativum HOM05D000611 ORTHO05D000809 5.5e-06 55.1 128 32.0
vmacro12778 Vaccinium macrocarpon HOM05D000611 ORTHO05D000809 5.5e-06 55.1 73 42.5
Ciclev10018273m.g Citrus clementina HOM05D000611 ORTHO05D000809 9.3e-06 54.3 137 32.1
MELO3C026605.2 Cucumis melo HOM05D000611 ORTHO05D000809 9.3e-06 54.3 137 32.1
Peaxi162Scf00342g00925 Petunia axillaris HOM05D000611 ORTHO05D000809 9.3e-06 54.3 67 35.8
SGA_v2.0_scaffold112G31647 Striga asiatica HOM05D000611 ORTHO05D000809 9.3e-06 54.3 70 38.6


User provided reference genes

Program Settings