Gene: Solyc01g056620.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g056620.4
  • Transcript Identifier Solyc01g056620.4.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 48287694-48295115 : positive

Gene Family Information

  • ID HOM05D000611
  • #Genes/#Species 929/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g056620.4.1
  • uniprot A0A3Q7EX60
  • gene_id Solyc01g056620

Descriptions

  • Description Double-stranded RNA-binding protein 1 (AHRD V3.3 *** A0A2G2XPY3_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009616
ISO
PLAZA Integrative OrthologyRNAi-mediated antiviral immune response AT3G62800
GO:0070919
ISO
PLAZA Integrative Orthologyproduction of siRNA involved in chromatin silencing by small RNA AT3G62800
GO:0035196
ISO
PLAZA Integrative Orthologyproduction of miRNAs involved in gene silencing by miRNA AT3G62800
GO:0051607
ISO
PLAZA Integrative Orthologydefense response to virus AT3G62800
GO:0010267
ISO
PLAZA Integrative Orthologyproduction of ta-siRNAs involved in RNA interference AT3G62800

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003725
IEA
InterProdouble-stranded RNA binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G26932

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G62800

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
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InterPro Description
IPR044450 AtDRB-like, first double-stranded RNA binding domain, plant
IPR014720 Double-stranded RNA-binding domain
Mapman id Description
16.9.1.4.1 RNA processing.mRNA silencing.transacting siRNA pathway.DRB4-DRB7.1 dsRNA-binding regulator complex.component DRB4