Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT35G0590 Cannabis sativa HOM05D007352 ORTHO05D009389 2.8e-187 659.4 654 100.0
QL05p019112 Quercus lobata HOM05D007352 ORTHO05D009389 3.8e-120 436.4 464 77.8
Gohir.A03G111600 Gossypium hirsutum HOM05D007352 ORTHO05D009389 8.5e-120 435.3 453 77.3
Haze_15863 Corylus avellana HOM05D007352 ORTHO05D009389 2.7e-118 430.3 454 78.6
arahy.Tifrunner.gnm1.ann1.X8VU69 Arachis hypogaea HOM05D007352 ORTHO05D009389 1.0e-117 428.3 469 74.8
Phvul.006G126800 Phaseolus vulgaris HOM05D007352 ORTHO05D009389 4.0e-117 426.4 455 75.6
arahy.Tifrunner.gnm1.ann1.Y4G0P0 Arachis hypogaea HOM05D007352 ORTHO05D009389 5.2e-117 426.0 465 75.9
Ca_00856_v3 Cicer arietinum L. HOM05D007352 ORTHO05D009389 2.6e-116 423.7 459 75.8
Duzib251G0222 Durio zibethinus HOM05D007352 ORTHO05D009389 2.6e-116 423.7 461 75.7
Psat1g166520 Pisum sativum HOM05D007352 ORTHO05D009389 3.7e-115 419.9 454 76.2
TPR.G26324 Trifolium pratense HOM05D007352 ORTHO05D009389 3.7e-115 419.9 460 75.0
Glyma.15G131800 Glycine max HOM05D007352 ORTHO05D009389 8.2e-115 418.7 456 75.4
C06p13600 Brassica napus HOM05D007352 ORTHO05D009389 7.7e-113 412.1 468 72.9
BcaC08g43959 Brassica carinata HOM05D007352 ORTHO05D009389 1.7e-112 411.0 468 72.9
BolC6t36524H Brassica oleracea HOM05D007352 ORTHO05D009389 1.7e-112 411.0 468 72.9
BraA05t20827Z Brassica rapa HOM05D007352 ORTHO05D009389 2.2e-112 410.6 451 74.9
BcaB02g11032 Brassica carinata HOM05D007352 ORTHO05D009389 1.1e-111 408.3 451 74.7
Manes.11G031901 Manihot esculenta HOM05D007352 ORTHO05D009389 1.5e-111 407.9 479 72.2
A05p19210 Brassica napus HOM05D007352 ORTHO05D009389 1.9e-111 407.5 451 74.7
Ciclev10025103m.g Citrus clementina HOM05D007352 ORTHO05D009389 1.6e-110 404.4 445 76.0
Potri.013G105000 Populus trichocarpa HOM05D007352 ORTHO05D009389 8.0e-110 402.1 454 73.1
Sabra13G0090700 Salix brachista HOM05D007352 ORTHO05D009389 3.0e-109 400.2 454 73.1
Sp1g38610 Schrenkiella parvula HOM05D007352 ORTHO05D009389 3.0e-109 400.2 458 74.0
Lj6g0022790 Lotus japonicus HOM05D007352 ORTHO05D009389 4.0e-109 399.8 436 77.8
Dinv27397 Davidia involucrata HOM05D007352 ORTHO05D009389 5.2e-109 399.4 447 76.3
Gohir.D02G136200 Gossypium hirsutum HOM05D007352 ORTHO05D009389 8.8e-109 398.7 434 77.4
Lalb_Chr20g0120141 Lupinus albus HOM05D007352 ORTHO05D009389 5.7e-108 396.0 438 76.3
COL.COLO4_27631 Corchorus olitorius HOM05D007352 ORTHO05D009389 1.3e-107 394.8 447 74.5
Cpa.g.sc25.26 Carica papaya HOM05D007352 ORTHO05D009389 2.0e-105 387.5 434 75.8
CiPaw.02G144900 Carya illinoinensis HOM05D007352 ORTHO05D009389 3.5e-105 386.7 424 78.8
Sed0016070 Sechium edule HOM05D007352 ORTHO05D009389 3.5e-105 386.7 452 72.6
Prupe.3G056800 Prunus persica HOM05D007352 ORTHO05D009389 5.9e-105 386.0 403 81.1
Nn2g12740 Nelumbo nucifera HOM05D007352 ORTHO05D009389 3.8e-104 383.3 466 71.5
TAR636G0386 Trochodendron aralioides HOM05D007352 ORTHO05D009389 1.1e-103 381.7 467 71.5
TAR636G1169 Trochodendron aralioides HOM05D007352 ORTHO05D009389 1.1e-103 381.7 467 71.5
Rhsim08G0228600 Rhododendron simsii HOM05D007352 ORTHO05D009389 1.9e-103 380.9 444 75.5
Lj9A311T59 Lonicera japonica HOM05D007352 ORTHO05D009389 5.5e-103 379.4 445 74.2
AUR62031951 Chenopodium quinoa HOM05D007352 ORTHO05D009389 1.2e-102 378.3 448 74.3
Thhalv10011294m.g Eutrema salsugineum HOM05D007352 ORTHO05D009389 1.2e-102 378.3 472 69.5
HanXRQChr11g0348741 Helianthus annuus HOM05D007352 ORTHO05D009389 1.6e-102 377.9 443 73.4
vmacro18843 Vaccinium macrocarpon HOM05D007352 ORTHO05D009389 2.8e-102 377.1 448 74.1
AUR62022237 Chenopodium quinoa HOM05D007352 ORTHO05D009389 1.0e-101 375.2 448 73.9
ECA232G1252 Erigeron canadensis HOM05D001329 ORTHO05D004946 1.0e-101 375.2 443 72.7
Hund07627 Selenicereus undatus HOM05D007352 ORTHO05D009389 3.0e-101 373.6 449 73.5
Medtr2g030540 Medicago truncatula HOM05D007352 ORTHO05D009389 8.9e-101 372.1 448 73.0
RcHm_v2.0_Chr2g0141041 Rosa chinensis HOM05D007352 ORTHO05D009389 2.6e-100 370.5 409 68.5
AT1G51965 Arabidopsis thaliana HOM05D007352 ORTHO05D009389 1.3e-99 368.2 449 71.3
EL10Ac9g21188 Beta vulgaris HOM05D007352 ORTHO05D009389 1.3e-99 368.2 445 72.6
ClCG09G008130 Citrullus lanatus HOM05D007352 ORTHO05D009052 1.3e-99 368.2 445 70.8
Carub.0001s4090 Capsella rubella HOM05D007352 ORTHO05D009389 1.7e-99 367.9 451 70.7
MD09G1200200 Malus domestica HOM05D007352 ORTHO05D009389 1.7e-99 367.9 405 78.8
Aqoxy7G01368 Aquilegia oxysepala HOM05D007352 ORTHO05D009389 2.8e-99 367.1 469 68.2
AL1G60010 Arabidopsis lyrata HOM05D007352 ORTHO05D009389 8.3e-99 365.5 449 70.6
Lsat_1_v5_gn_4_98021 Lactuca sativa HOM05D007352 ORTHO05D009389 1.4e-98 364.8 428 74.8
Eucgr.F03084 Eucalyptus grandis HOM05D007352 ORTHO05D009389 1.0e-96 358.6 449 71.0
Aa31LG10G2840 Aethionema arabicum HOM05D007352 ORTHO05D009389 1.7e-96 357.8 442 71.0
Peaxi162Scf00038g01145 Petunia axillaris HOM05D007352 ORTHO05D009389 5.0e-96 356.3 446 72.2
Cfa003634 Carpinus fangiana HOM05D007352 ORTHO05D009389 1.5e-95 354.8 407 76.9
Gorai.005G152200 Gossypium raimondii HOM05D007352 ORTHO05D009389 1.5e-95 354.8 407 76.9
SGA_v2.0_scaffold265G46057 Striga asiatica HOM05D007352 ORTHO05D009389 2.5e-95 354.0 442 71.5
MELO3C012722.2 Cucumis melo HOM05D007352 ORTHO05D009389 5.6e-95 352.8 461 68.8
FAN02G2393 Fragaria x ananassa HOM05D007352 ORTHO05D009389 5.6e-95 352.8 407 76.2
MBI04_g06993_MAGBIO Magnolia biondii HOM05D007352 ORTHO05D009389 2.1e-94 350.9 457 70.0
FvH4_6g32590 Fragaria vesca HOM05D007352 ORTHO05D009389 5.2e-93 346.3 406 75.6
CsaV3_7G026910 Cucumis sativus L. HOM05D007352 ORTHO05D009389 1.5e-92 344.7 457 68.9
CSS0004060 Camellia sinensis var. sinensis HOM05D007352 ORTHO05D009389 3.4e-92 343.6 421 73.9
CSS0040101 Camellia sinensis var. sinensis HOM05D007352 ORTHO05D009389 9.8e-92 342.0 421 74.1
Thecc.02G309100 Theobroma cacao HOM05D007352 ORTHO05D009389 1.7e-91 341.3 409 75.3
Hma1.2p1_0430F.1_g151250 Hydrangea macrophylla HOM05D007352 ORTHO05D009389 2.2e-91 340.9 407 76.7
Ah.01g017290 Amaranthus hybridus HOM05D007352 ORTHO05D009389 3.7e-91 340.1 534 52.4
Solyc03g121110.3 Solanum lycopersicum HOM05D007352 ORTHO05D009389 4.9e-91 339.7 451 69.6
SalBow1G5626 Salvia bowleyana HOM05D007352 ORTHO05D009389 6.4e-91 339.3 448 70.1
Nitab4.5_0004969g0060 Nicotiana tabacum HOM05D007352 ORTHO05D009389 1.4e-90 338.2 456 69.1
Sopen03g039940 Solanum pennellii HOM05D007352 ORTHO05D009389 1.4e-90 338.2 449 69.9
Migut.L00048 Erythranthe guttata HOM05D007352 ORTHO05D009389 5.4e-90 336.3 436 70.2
Nitab4.5_0005085g0030 Nicotiana tabacum HOM05D007352 ORTHO05D009389 7.0e-90 335.9 438 70.8
THA.LOC104810542 Tarenaya hassleriana HOM05D007352 ORTHO05D009389 3.5e-89 333.6 410 53.7
PGSC0003DMG400002522 Solanum tuberosum HOM05D007352 ORTHO05D009389 4.6e-89 333.2 433 70.9
CAN.G1143.23 Capsicum annuum HOM05D007352 ORTHO05D009389 5.0e-88 329.7 447 69.1
HPP92_000532 Vanilla planifolia HOM05D007352 ORTHO05D009389 2.0e-84 317.8 460 65.2
Atru.BG.161.p Acer truncatum HOM05D007352 ORTHO05D009389 2.6e-84 317.4 393 73.0
SHI11130 Sapria himalayana HOM05D007352 ORTHO05D009389 4.4e-84 316.6 463 51.6
CDE05G2407 Ceratophyllum demersum HOM05D007352 ORTHO05D009389 8.3e-83 312.4 442 67.9
Cc06_g12800 Coffea canephora HOM05D007352 ORTHO05D009389 1.9e-79 301.2 420 70.7
FAN09G1056 Fragaria x ananassa HOM05D007352 ORTHO05D009389 1.5e-76 291.6 227 66.5
Os02g0226900 Oryza sativa ssp. japonica HOM05D007352 ORTHO05D009389 2.2e-75 287.7 452 61.7
GSVIVG01016956001 Vitis vinifera HOM05D007352 ORTHO05D009389 8.3e-75 285.8 383 69.2
Actinidia32110 Actinidia chinensis HOM05D007352 ORTHO05D009389 3.6e-62 243.8 191 67.5
Sc15g0001710 Simmondsia chinensis HOM05D007352 ORTHO05D009389 1.1e-61 242.3 222 59.0
Zm00001eb205030 Zea mays HOM05D007352 ORTHO05D009389 9.6e-47 192.6 402 60.9
Ah.16g103230 Amaranthus hybridus HOM05D007352 ORTHO05D009389 2.0e-44 184.9 116 75.0
VMungo0540G1340 Vigna mungo HOM05D007352 ORTHO05D009389 3.4e-44 184.1 114 73.7
MD15G1412800 Malus domestica HOM05D007352 ORTHO05D009389 3.9e-40 170.6 116 73.3
CARHR042130 Cardamine hirsuta HOM05D007352 ORTHO05D009389 2.5e-39 167.9 116 69.0
Aqoxy5G00202 Aquilegia oxysepala HOM05D007352 ORTHO05D009389 4.8e-38 163.7 132 61.4
Sc15g0001700 Simmondsia chinensis HOM05D007352 ORTHO05D009389 4.8e-38 163.7 98 78.6
Ah.16g103250 Amaranthus hybridus HOM05D007352 ORTHO05D009389 4.5e-36 157.1 220 46.4
PSO832G0057 Papaver somniferum HOM05D007352 ORTHO05D009389 7.6e-36 156.4 270 78.1
FAN05G3498 Fragaria x ananassa HOM05D001329 ORTHO05D002618 3.2e-34 151.0 103 69.9
SEGI_18978 Sequoiadendron giganteum HOM05D007352 ORTHO05D009389 7.4e-31 139.8 415 53.3
SGA_v2.0_scaffold115G32057 Striga asiatica HOM05D007352 ORTHO05D009389 1.4e-26 125.6 106 56.6
Actinidia32109 Actinidia chinensis HOM05D000647 ORTHO05D000485 1.5e-23 115.5 69 78.3
FAN05G5710 Fragaria x ananassa HOM05D007352 ORTHO05D009389 9.7e-23 112.8 69 73.9
FAN14G1294 Fragaria x ananassa HOM05D007352 ORTHO05D009389 6.9e-21 106.7 66 72.7
ATR0751G068 Amborella trichopoda HOM05D007352 ORTHO05D009389 2.0e-20 105.1 144 45.1
Mapoly0116s0031 Marchantia polymorpha HOM05D040657 ORTHO05D023551 8.2e-06 56.6 145 24.8


User provided reference genes

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