Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT35G0087 Cannabis sativa HOM05D004611 ORTHO05D005794 4.6e-133 478.0 261 100.0
CANSAT78G0742 Cannabis sativa HOM05D004611 ORTHO05D005794 3.5e-93 345.5 217 90.8
Prupe.1G111500 Prunus persica HOM05D004611 ORTHO05D005794 2.0e-48 196.8 185 63.2
FAN07G0444 Fragaria x ananassa HOM05D004611 ORTHO05D005794 2.2e-47 193.4 180 63.3
Eucgr.H04083 Eucalyptus grandis HOM05D004611 ORTHO05D005794 2.5e-46 189.9 186 60.8
RcHm_v2.0_Chr4g0426211 Rosa chinensis HOM05D004611 ORTHO05D005794 2.5e-46 189.9 180 63.3
CiPaw.02G072100 Carya illinoinensis HOM05D004611 ORTHO05D005794 4.2e-46 189.1 183 62.3
FAN17G1213 Fragaria x ananassa HOM05D004611 ORTHO05D005794 3.6e-45 186.0 170 65.3
CSS0006805 Camellia sinensis var. sinensis HOM05D004611 ORTHO05D005794 1.0e-44 184.5 176 61.4
QL06p013322 Quercus lobata HOM05D004611 ORTHO05D005794 1.4e-44 184.1 183 60.7
Potri.008G101200 Populus trichocarpa HOM05D004611 ORTHO05D005794 4.4e-43 179.1 170 61.8
FvH4_4g20770 Fragaria vesca HOM05D004611 ORTHO05D005794 9.8e-43 177.9 180 60.6
FAN12G0652 Fragaria x ananassa HOM05D004611 ORTHO05D005794 9.8e-43 177.9 180 60.6
Nn8g40813 Nelumbo nucifera HOM05D004611 ORTHO05D005794 9.8e-43 177.9 193 54.4
Sed0020756 Sechium edule HOM05D004611 ORTHO05D005794 9.8e-43 177.9 189 56.1
AT5G49930 Arabidopsis thaliana HOM05D004611 ORTHO05D005794 1.3e-42 177.6 186 56.5
Cfa015689 Carpinus fangiana HOM05D004611 ORTHO05D005794 1.7e-42 177.2 183 59.0
Sabra08G0076500 Salix brachista HOM05D004611 ORTHO05D005794 2.2e-42 176.8 180 58.3
Sopen01g023170 Solanum pennellii HOM05D004611 ORTHO05D005794 2.8e-42 176.4 181 56.4
Haze_00831 Corylus avellana HOM05D004611 ORTHO05D005794 3.7e-42 176.0 183 57.9
ClCG06G004360 Citrullus lanatus HOM05D004611 ORTHO05D005794 4.9e-42 175.6 188 54.3
AL8G23880 Arabidopsis lyrata HOM05D004611 ORTHO05D005794 8.3e-42 174.9 186 55.4
DCAR_030442 Daucus carota HOM05D004611 ORTHO05D005794 8.3e-42 174.9 184 57.6
Aqoxy2G02628 Aquilegia oxysepala HOM05D004611 ORTHO05D005794 1.1e-41 174.5 193 53.9
PGSC0003DMG402001235 Solanum tuberosum HOM05D004611 ORTHO05D005794 1.1e-41 174.5 180 55.6
CsaV3_6G000020 Cucumis sativus L. HOM05D004611 ORTHO05D005794 1.4e-41 174.1 173 58.4
Nitab4.5_0000062g0520 Nicotiana tabacum HOM05D004611 ORTHO05D005794 1.4e-41 174.1 185 54.6
COL.COLO4_34558 Corchorus olitorius HOM05D004611 ORTHO05D005794 4.1e-41 172.6 180 58.9
PSO541G3737 Papaver somniferum HOM05D004611 ORTHO05D005794 5.4e-41 172.2 197 55.3
TWI73G0848 Tripterygium wilfordii HOM05D004611 ORTHO05D005794 5.4e-41 172.2 169 61.5
Ciclev10004185m.g Citrus clementina HOM05D004611 ORTHO05D005794 7.0e-41 171.8 174 60.9
MELO3C021251.2 Cucumis melo HOM05D004611 ORTHO05D005794 7.0e-41 171.8 186 56.5
MD13G1148000 Malus domestica HOM05D004611 ORTHO05D005794 7.0e-41 171.8 215 54.0
Thhalv10012510m.g Eutrema salsugineum HOM05D004611 ORTHO05D005794 1.2e-40 171.0 182 56.6
Lj6A696G31 Lonicera japonica HOM05D004611 ORTHO05D005794 2.0e-40 170.2 180 57.2
Manes.03G208700 Manihot esculenta HOM05D004611 ORTHO05D005794 2.0e-40 170.2 177 59.3
Gohir.D02G061400 Gossypium hirsutum HOM05D004611 ORTHO05D005794 2.7e-40 169.9 168 58.3
BcaB01g02933 Brassica carinata HOM05D004611 ORTHO05D005794 3.5e-40 169.5 184 54.3
Solyc01g057840.3 Solanum lycopersicum HOM05D004611 ORTHO05D005794 3.5e-40 169.5 181 56.4
Migut.N00024 Erythranthe guttata HOM05D004611 ORTHO05D005794 5.9e-40 168.7 182 54.9
Thecc.04G307400 Theobroma cacao HOM05D004611 ORTHO05D005794 1.0e-39 167.9 179 58.1
A03p27560 Brassica napus HOM05D004611 ORTHO05D005794 1.3e-39 167.5 183 54.1
Carub.0008s0980 Capsella rubella HOM05D004611 ORTHO05D005794 1.7e-39 167.2 186 54.3
Gorai.005G069100 Gossypium raimondii HOM05D004611 ORTHO05D005794 1.7e-39 167.2 168 57.1
Psat1g162720 Pisum sativum HOM05D004611 ORTHO05D005794 1.7e-39 167.2 234 47.9
Rhsim02G0001700 Rhododendron simsii HOM05D004611 ORTHO05D005794 1.7e-39 167.2 161 59.0
arahy.Tifrunner.gnm1.ann1.VX19JK Arachis hypogaea HOM05D004611 ORTHO05D005794 2.3e-39 166.8 183 55.2
EL10Ac3g06291 Beta vulgaris HOM05D004611 ORTHO05D005794 2.3e-39 166.8 176 54.5
BcaC01g04844 Brassica carinata HOM05D004611 ORTHO05D005794 2.3e-39 166.8 183 54.1
C03p33270 Brassica napus HOM05D004611 ORTHO05D005794 2.3e-39 166.8 183 54.1
Nitab4.5_0003678g0010 Nicotiana tabacum HOM05D004611 ORTHO05D005794 2.3e-39 166.8 214 49.1
PSO675G3276 Papaver somniferum HOM05D004611 ORTHO05D005794 2.3e-39 166.8 197 55.3
AUR62030016 Chenopodium quinoa HOM05D004611 ORTHO05D005794 2.9e-39 166.4 179 53.1
Sp6g11490 Schrenkiella parvula HOM05D004611 ORTHO05D005794 2.9e-39 166.4 180 53.3
arahy.Tifrunner.gnm1.ann1.J0E0JD Arachis hypogaea HOM05D004611 ORTHO05D005794 3.8e-39 166.0 178 56.7
AUR62002591 Chenopodium quinoa HOM05D004611 ORTHO05D005794 3.8e-39 166.0 186 51.6
VMungo0540G0237 Vigna mungo HOM05D004611 ORTHO05D005794 3.8e-39 166.0 160 61.2
BolC3t15649H Brassica oleracea HOM05D004611 ORTHO05D005794 5.0e-39 165.6 180 54.4
MD16G1147800 Malus domestica HOM05D004611 ORTHO05D005794 5.0e-39 165.6 216 51.9
Ah.07g203900 Amaranthus hybridus HOM05D004611 ORTHO05D005794 6.6e-39 165.2 176 53.4
Gohir.A02G056200 Gossypium hirsutum HOM05D004611 ORTHO05D005794 1.1e-38 164.5 168 56.5
ATR0693G069 Amborella trichopoda HOM05D004611 ORTHO05D005794 1.5e-38 164.1 227 45.8
BraA03t11969Z Brassica rapa HOM05D004611 ORTHO05D005794 1.9e-38 163.7 183 53.6
vmacro15164 Vaccinium macrocarpon HOM05D004611 ORTHO05D005794 3.3e-38 162.9 166 59.0
GSVIVG01034941001 Vitis vinifera HOM05D004611 ORTHO05D005794 4.3e-38 162.5 174 58.6
Phvul.006G121000 Phaseolus vulgaris HOM05D004611 ORTHO05D005794 5.6e-38 162.2 181 54.1
CARHR258790 Cardamine hirsuta HOM05D004611 ORTHO05D005794 1.6e-37 160.6 186 52.2
CAN.G179.3 Capsicum annuum HOM05D004611 ORTHO05D005794 2.1e-37 160.2 179 53.6
Cc03_g00470 Coffea canephora HOM05D004611 ORTHO05D005794 2.8e-37 159.8 172 54.7
THA.LOC104818864 Tarenaya hassleriana HOM05D004611 ORTHO05D005794 2.8e-37 159.8 183 51.9
Atru.chr4.3104 Acer truncatum HOM05D004611 ORTHO05D005794 3.6e-37 159.5 178 56.7
Actinidia02513 Actinidia chinensis HOM05D004611 ORTHO05D005794 3.6e-37 159.5 179 57.0
SGA_v2.0_scaffold123G33405 Striga asiatica HOM05D004611 ORTHO05D005794 6.1e-37 158.7 184 51.1
Duzib151G0109 Durio zibethinus HOM05D004611 ORTHO05D005794 1.0e-36 157.9 169 55.0
Aa31LG3G6800 Aethionema arabicum HOM05D004611 ORTHO05D005794 1.4e-36 157.5 184 52.7
PGR004G0015 Punica granatum HOM05D004611 ORTHO05D005794 1.4e-36 157.5 167 58.7
Glyma.15G136900 Glycine max HOM05D004611 ORTHO05D005794 3.0e-36 156.4 166 57.8
Lalb_Chr18g0058501 Lupinus albus HOM05D004611 ORTHO05D005794 3.0e-36 156.4 162 59.3
Os12g0564600 Oryza sativa ssp. japonica HOM05D004611 ORTHO05D005794 3.0e-36 156.4 183 51.4
MSTRG.21753 Avicennia marina HOM05D004611 ORTHO05D005794 5.2e-36 155.6 185 50.3
Ca_00946_v3 Cicer arietinum L. HOM05D004611 ORTHO05D005794 8.9e-36 154.8 233 47.2
Ca_00952_v3 Cicer arietinum L. HOM05D004611 ORTHO05D005794 8.9e-36 154.8 233 47.2
Glyma.09G031900 Glycine max HOM05D004611 ORTHO05D005794 1.5e-35 154.1 166 57.2
Sc25g0001590 Simmondsia chinensis HOM05D004611 ORTHO05D005794 2.6e-35 153.3 161 57.8
Lj6g0013514 Lotus japonicus HOM05D004611 ORTHO05D005794 4.4e-35 152.5 180 55.0
Oeu045271.1 Olea europaea HOM05D004611 ORTHO05D005794 4.4e-35 152.5 173 52.6
HanXRQChr11g0353941 Helianthus annuus HOM05D004611 ORTHO05D005794 1.7e-34 150.6 169 50.9
ECA247G1486 Erigeron canadensis HOM05D004611 ORTHO05D005794 1.1e-33 147.9 182 50.5
unitig_746.g26902 Utricularia gibba HOM05D004611 ORTHO05D005794 2.7e-32 143.3 171 49.7
DCAR_002526 Daucus carota HOM05D004611 ORTHO05D005794 7.8e-32 141.7 185 49.2
Zm00001eb136770 Zea mays HOM05D004611 ORTHO05D005794 8.6e-31 138.3 165 51.5
Lsat_1_v5_gn_1_40220 Lactuca sativa HOM05D004611 ORTHO05D005794 5.6e-30 135.6 173 50.3
TPR.G10113 Trifolium pratense HOM05D004611 ORTHO05D005794 5.6e-30 135.6 157 54.1
CDE02G2799 Ceratophyllum demersum HOM05D004611 ORTHO05D005794 7.3e-30 135.2 175 48.6
Oeu046590.2 Olea europaea HOM05D004611 ORTHO05D005794 8.9e-28 128.3 168 48.8
TAR362G0625 Trochodendron aralioides HOM05D004611 ORTHO05D005794 7.5e-27 125.2 129 56.6
Peaxi162Scf00126g01512 Petunia axillaris HOM05D004611 ORTHO05D005794 6.0e-24 115.5 113 53.1
Mapoly0029s0152 Marchantia polymorpha HOM05D004611 ORTHO05D005794 6.8e-20 102.1 208 36.5
Cpa.g.sc146.70 Carica papaya HOM05D004611 ORTHO05D005794 2.6e-19 100.1 155 44.5
MBI19_g32689_MAGBIO Magnolia biondii HOM05D004611 ORTHO05D005794 9.8e-19 98.2 217 36.4
SEGI_12646 Sequoiadendron giganteum HOM05D004611 ORTHO05D005794 9.8e-19 98.2 184 35.9
Pp3c6_29680 Physcomitrium patens HOM05D004611 ORTHO05D005794 1.1e-17 94.7 230 33.5
CBR_g49302 Chara braunii HOM05D004611 ORTHO05D005794 9.2e-17 91.7 192 32.3
AagrBONN_evm.TU.Sc2ySwM_344.977 Anthoceros agrestis HOM05D004611 ORTHO05D005794 6.0e-16 89.0 203 35.0
HanXRQChr04g0096671 Helianthus annuus HOM05D004611 ORTHO05D005794 9.2e-09 65.1 46 71.7
SMO356G0321 Selaginella moellendorffii HOM05D004611 ORTHO05D005794 1.2e-08 64.7 187 30.5
HPP92_010928 Vanilla planifolia HOM05D004611 ORTHO05D005794 1.6e-08 64.3 95 47.4
HanXRQChr06g0164931 Helianthus annuus HOM05D004611 ORTHO05D005794 5.1e-07 59.3 50 64.0
TPR.G40539 Trifolium pratense HOM05D004611 ORTHO05D005794 9.6e-06 55.1 46 67.4


User provided reference genes

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