Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G3628 Cannabis sativa HOM05D004198 ORTHO05D043385 1.1e-86 323.2 157 100.0
CANSAT56G1757 Cannabis sativa HOM05D004198 ORTHO05D006470 4.4e-22 108.6 58 84.5
Cpa.g.sc82.44 Carica papaya HOM05D004198 ORTHO05D006470 3.5e-19 99.0 58 74.1
Cc00_g13770 Coffea canephora HOM05D004198 ORTHO05D006470 7.7e-19 97.8 58 72.4
Nn8g38508 Nelumbo nucifera HOM05D004198 ORTHO05D006470 2.9e-18 95.9 58 72.4
Aa31sc786G10 Aethionema arabicum HOM05D004198 ORTHO05D006470 3.8e-18 95.5 59 71.2
Dinv25493 Davidia involucrata HOM05D004198 ORTHO05D006470 3.8e-18 95.5 58 74.1
Eucgr.C03183 Eucalyptus grandis HOM05D004198 ORTHO05D006470 3.8e-18 95.5 59 67.8
Nitab4.5_0000055g0100 Nicotiana tabacum HOM05D004198 ORTHO05D006470 3.8e-18 95.5 61 63.9
Nitab4.5_0001114g0030 Nicotiana tabacum HOM05D004198 ORTHO05D006470 3.8e-18 95.5 61 63.9
Ca_21348_v3 Cicer arietinum L. HOM05D004198 ORTHO05D006470 5.0e-18 95.1 58 72.4
Sabra06G0105400 Salix brachista HOM05D004198 ORTHO05D006470 5.0e-18 95.1 58 70.7
GSVIVG01014998001 Vitis vinifera HOM05D004198 ORTHO05D006470 5.0e-18 95.1 58 72.4
Sc14g0000910 Simmondsia chinensis HOM05D004198 ORTHO05D006470 6.5e-18 94.7 58 69.0
Solyc07g017610.3 Solanum lycopersicum HOM05D004198 ORTHO05D006470 6.5e-18 94.7 58 63.8
Sopen07g006460 Solanum pennellii HOM05D004198 ORTHO05D006470 6.5e-18 94.7 58 63.8
PGSC0003DMG401015935 Solanum tuberosum HOM05D004198 ORTHO05D006470 6.5e-18 94.7 61 62.3
Thecc.09G068000 Theobroma cacao HOM05D004198 ORTHO05D006470 6.5e-18 94.7 58 70.7
Carub.0007s0730 Capsella rubella HOM05D004198 ORTHO05D006470 8.6e-18 94.4 61 68.9
Duzib168G0708 Durio zibethinus HOM05D004198 ORTHO05D006470 8.6e-18 94.4 58 70.7
Peaxi162Scf00452g00120 Petunia axillaris HOM05D004198 ORTHO05D006470 8.6e-18 94.4 58 65.5
Ciclev10007313m.g Citrus clementina HOM05D004198 ORTHO05D006470 1.1e-17 94.0 58 69.0
QL11p003422 Quercus lobata HOM05D004198 ORTHO05D006470 1.1e-17 94.0 58 70.7
Gohir.A06G082000 Gossypium hirsutum HOM05D004198 ORTHO05D006470 1.5e-17 93.6 58 69.0
BraA03t15222Z Brassica rapa HOM05D004198 ORTHO05D006470 1.9e-17 93.2 59 66.1
CAN.G86.12 Capsicum annuum HOM05D004198 ORTHO05D006470 1.9e-17 93.2 61 62.3
Lj4g0026986 Lotus japonicus HOM05D004198 ORTHO05D006470 1.9e-17 93.2 58 70.7
Manes.16G088900 Manihot esculenta HOM05D004198 ORTHO05D006470 1.9e-17 93.2 58 69.0
A01p05020 Brassica napus HOM05D004198 ORTHO05D006470 2.5e-17 92.8 59 67.8
C07p59520 Brassica napus HOM05D004198 ORTHO05D006470 2.5e-17 92.8 58 67.2
BolC7t46396H Brassica oleracea HOM05D004198 ORTHO05D006470 2.5e-17 92.8 58 67.2
BraA01t00484Z Brassica rapa HOM05D004198 ORTHO05D006470 2.5e-17 92.8 59 67.8
CSS0027728 Camellia sinensis var. sinensis HOM05D004198 ORTHO05D006470 2.5e-17 92.8 58 69.0
Duzib150G0139 Durio zibethinus HOM05D004198 ORTHO05D006470 2.5e-17 92.8 58 67.2
Gohir.D06G081400 Gossypium hirsutum HOM05D004198 ORTHO05D006470 2.5e-17 92.8 58 69.0
Gorai.010G094700 Gossypium raimondii HOM05D004198 ORTHO05D006470 2.5e-17 92.8 58 69.0
Lalb_Chr12g0200381 Lupinus albus HOM05D004198 ORTHO05D006470 2.5e-17 92.8 58 69.0
Phvul.003G126300 Phaseolus vulgaris HOM05D004198 ORTHO05D006470 2.5e-17 92.8 58 70.7
Prupe.7G189800 Prunus persica HOM05D004198 ORTHO05D006470 2.5e-17 92.8 58 69.0
Sp7g30900 Schrenkiella parvula HOM05D004198 ORTHO05D006470 2.5e-17 92.8 59 67.8
TAR624G1053 Trochodendron aralioides HOM05D004198 ORTHO05D006470 2.5e-17 92.8 58 70.7
VMungo1215G1653 Vigna mungo HOM05D004198 ORTHO05D006470 2.5e-17 92.8 58 69.0
arahy.Tifrunner.gnm1.ann1.54PPAU Arachis hypogaea HOM05D004198 ORTHO05D006470 3.3e-17 92.4 58 69.0
arahy.Tifrunner.gnm1.ann1.Q7P4IG Arachis hypogaea HOM05D004198 ORTHO05D006470 3.3e-17 92.4 58 69.0
A03p61830 Brassica napus HOM05D004198 ORTHO05D006470 3.3e-17 92.4 58 67.2
BolC7t46395H Brassica oleracea HOM05D004198 ORTHO05D006470 3.3e-17 92.4 58 67.2
BraA03t15221Z Brassica rapa HOM05D004198 ORTHO05D006470 3.3e-17 92.4 58 67.2
Thhalv10024287m.g Eutrema salsugineum HOM05D004198 ORTHO05D006470 3.3e-17 92.4 61 65.6
Medtr4g124470 Medicago truncatula HOM05D004198 ORTHO05D006470 3.3e-17 92.4 58 70.7
PGR044G0871 Punica granatum HOM05D004198 ORTHO05D006470 3.3e-17 92.4 61 65.6
Rhsim05G0001300 Rhododendron simsii HOM05D004198 ORTHO05D006470 3.3e-17 92.4 58 69.0
Migut.J00870 Erythranthe guttata HOM05D004198 ORTHO05D006470 5.5e-17 91.7 58 67.2
Atru.chr7.1797 Acer truncatum HOM05D004198 ORTHO05D006470 7.2e-17 91.3 59 66.1
Cfa002929 Carpinus fangiana HOM05D004198 ORTHO05D006470 7.2e-17 91.3 58 69.0
Haze_26080 Corylus avellana HOM05D004198 ORTHO05D006470 7.2e-17 91.3 58 69.0
EL10Ac8g18953 Beta vulgaris HOM05D004198 ORTHO05D006470 9.5e-17 90.9 62 62.9
Glyma.13G115500 Glycine max HOM05D004198 ORTHO05D006470 9.5e-17 90.9 58 67.2
THA.LOC104804447 Tarenaya hassleriana HOM05D004198 ORTHO05D006470 9.5e-17 90.9 58 67.2
vmacro17070 Vaccinium macrocarpon HOM05D004198 ORTHO05D006470 9.5e-17 90.9 61 65.6
ATR0099G092 Amborella trichopoda HOM05D004198 ORTHO05D006470 1.2e-16 90.5 59 62.7
BcaC09g52122 Brassica carinata HOM05D004198 ORTHO05D006470 1.2e-16 90.5 59 66.1
C01p05470 Brassica napus HOM05D004198 ORTHO05D006470 1.2e-16 90.5 59 66.1
BolC1t00527H Brassica oleracea HOM05D004198 ORTHO05D006470 1.2e-16 90.5 59 66.1
CiPaw.03G199300 Carya illinoinensis HOM05D004198 ORTHO05D006470 1.2e-16 90.5 58 67.2
Psat4g019880 Pisum sativum HOM05D004198 ORTHO05D006470 1.2e-16 90.5 58 69.0
TPR.G12649 Trifolium pratense HOM05D004198 ORTHO05D006470 1.2e-16 90.5 58 69.0
TWI63G0842 Tripterygium wilfordii HOM05D004198 ORTHO05D006470 1.2e-16 90.5 60 65.0
Actinidia39606 Actinidia chinensis HOM05D004198 ORTHO05D006470 1.6e-16 90.1 61 65.6
Duzib168G0961 Durio zibethinus HOM05D004198 ORTHO05D006470 1.6e-16 90.1 58 63.8
SalBow6G6057 Salvia bowleyana HOM05D004198 ORTHO05D006470 1.6e-16 90.1 58 65.5
PSO724G0393 Papaver somniferum HOM05D004198 ORTHO05D006470 2.1e-16 89.7 58 65.5
Zm00001eb192910 Zea mays HOM05D004198 ORTHO05D006470 2.1e-16 89.7 61 62.3
AL7G18410 Arabidopsis lyrata HOM05D004198 ORTHO05D006470 2.8e-16 89.4 61 63.9
FvH4_1g09640 Fragaria vesca HOM05D004198 ORTHO05D006470 2.8e-16 89.4 58 67.2
FAN19G0627 Fragaria x ananassa HOM05D004198 ORTHO05D006470 2.8e-16 89.4 58 67.2
FAN26G2565 Fragaria x ananassa HOM05D004198 ORTHO05D006470 2.8e-16 89.4 58 67.2
FAN28G0237 Fragaria x ananassa HOM05D004198 ORTHO05D006470 2.8e-16 89.4 58 67.2
Hma1.2p1_0179F.1_g079100 Hydrangea macrophylla HOM05D004198 ORTHO05D006470 2.8e-16 89.4 58 67.2
Lsat_1_v5_gn_5_138341 Lactuca sativa HOM05D004198 ORTHO05D006470 2.8e-16 89.4 61 60.7
Potri.006G134300 Populus trichocarpa HOM05D004198 ORTHO05D006470 2.8e-16 89.4 58 65.5
CsaV3_1G041440 Cucumis sativus L. HOM05D004198 ORTHO05D006470 3.6e-16 89.0 60 61.7
PSO135G0314 Papaver somniferum HOM05D004198 ORTHO05D006470 3.6e-16 89.0 58 65.5
Sed0024058 Sechium edule HOM05D004198 ORTHO05D006470 3.6e-16 89.0 58 63.8
AT4G33150 Arabidopsis thaliana HOM05D004198 ORTHO05D006470 4.7e-16 88.6 61 65.6
ClCG03G014720 Citrullus lanatus HOM05D004198 ORTHO05D006470 4.7e-16 88.6 58 63.8
MELO3C015556.2 Cucumis melo HOM05D004198 ORTHO05D006470 4.7e-16 88.6 60 61.7
Os02g0783700 Oryza sativa ssp. japonica HOM05D004198 ORTHO05D006470 6.1e-16 88.2 58 63.8
RcHm_v2.0_Chr2g0096481 Rosa chinensis HOM05D004198 ORTHO05D006470 6.1e-16 88.2 58 65.5
Aqoxy7G04190 Aquilegia oxysepala HOM05D004198 ORTHO05D006470 8.0e-16 87.8 60 65.0
CARHR241180 Cardamine hirsuta HOM05D004198 ORTHO05D006470 8.0e-16 87.8 61 65.6
HanXRQChr03g0060011 Helianthus annuus HOM05D004198 ORTHO05D006470 8.0e-16 87.8 58 63.8
Glyma.17G044300 Glycine max HOM05D004198 ORTHO05D006470 1.0e-15 87.4 58 65.5
ECA240G2250 Erigeron canadensis HOM05D004198 ORTHO05D006470 1.4e-15 87.0 61 60.7
MBI13_g01654_MAGBIO Magnolia biondii HOM05D004198 ORTHO05D006470 1.4e-15 87.0 59 62.7
AUR62028335 Chenopodium quinoa HOM05D004198 ORTHO05D006470 1.8e-15 86.7 58 63.8
Carub.0007s0731 Capsella rubella HOM05D004198 ORTHO05D006470 2.3e-15 86.3 61 60.7
MD02G1105000 Malus domestica HOM05D004198 ORTHO05D006470 2.3e-15 86.3 58 65.5
unitig_22.g6576 Utricularia gibba HOM05D004198 ORTHO05D006470 2.3e-15 86.3 58 62.1
AUR62025328 Chenopodium quinoa HOM05D004198 ORTHO05D006470 3.0e-15 85.9 58 63.8
HPP92_009326 Vanilla planifolia HOM05D004198 ORTHO05D006470 3.0e-15 85.9 59 57.6
Ah.09g228850 Amaranthus hybridus HOM05D004198 ORTHO05D006470 4.0e-15 85.5 58 58.6
Oeu021231.1 Olea europaea HOM05D004198 ORTHO05D006470 4.0e-15 85.5 58 63.8
Actinidia33515 Actinidia chinensis HOM05D004198 ORTHO05D006470 5.2e-15 85.1 51 70.6
AL7G18400 Arabidopsis lyrata HOM05D004198 ORTHO05D006470 6.8e-15 84.7 61 63.9
MSTRG.5977 Avicennia marina HOM05D004198 ORTHO05D006470 8.9e-15 84.3 59 64.4
TWI63G0157 Tripterygium wilfordii HOM05D004198 ORTHO05D006470 8.9e-15 84.3 58 58.6
MD02G1105300 Malus domestica HOM05D004198 ORTHO05D006470 1.2e-14 84.0 58 63.8
Hund08916 Selenicereus undatus HOM05D004198 ORTHO05D006470 2.0e-14 83.2 59 61.0
CDE05G0881 Ceratophyllum demersum HOM05D004198 ORTHO05D006470 2.6e-14 82.8 59 62.7
Ciclev10008705m.g Citrus clementina HOM05D004198 ORTHO05D006470 3.4e-14 82.4 58 56.9
Thecc.09G068400 Theobroma cacao HOM05D004198 ORTHO05D006470 7.5e-14 81.3 58 56.9
Atru.chr7.1795 Acer truncatum HOM05D004198 ORTHO05D006470 1.7e-13 80.1 58 55.2
EL10Ac8g18951 Beta vulgaris HOM05D004198 ORTHO05D006470 7.8e-11 71.2 58 53.4
SEGI_05824 Sequoiadendron giganteum HOM05D004198 ORTHO05D043385 1.0e-10 70.9 58 55.2
Mapoly0072s0092 Marchantia polymorpha HOM05D004198 ORTHO05D006470 1.7e-10 70.1 70 48.6
SGA_v2.0_scaffold31G12701 Striga asiatica HOM05D004198 ORTHO05D006470 5.6e-09 65.1 43 67.4
SMO145G0289 Selaginella moellendorffii HOM05D004198 ORTHO05D006470 7.3e-09 64.7 52 51.9
PGSC0003DMG400002301 Solanum tuberosum HOM05D004198 ORTHO05D006470 7.3e-09 64.7 50 52.0
CANSAT54G1423 Cannabis sativa HOM05D000862 ORTHO05D000943 1.6e-08 63.5 42 71.4
BcaNung02155 Brassica carinata HOM05D004198 ORTHO05D006470 8.0e-08 61.2 39 69.2
C07p59510 Brassica napus HOM05D004198 ORTHO05D006470 8.0e-08 61.2 39 69.2
CANSAT54G1589 Cannabis sativa HOM05D000862 ORTHO05D000943 2.0e-06 56.6 34 76.5
Pp3c27_7000 Physcomitrium patens HOM05D004198 ORTHO05D006470 7.5e-06 54.7 60 43.3


User provided reference genes

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