Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G3500 Cannabis sativa HOM05D000003 ORTHO05D009135 3.3e-86 321.6 157 100.0
CANSAT56G0966 Cannabis sativa HOM05D000003 ORTHO05D009135 1.6e-53 213.0 156 64.7
CANSAT35G0307 Cannabis sativa HOM05D000003 ORTHO05D009135 2.8e-53 212.2 156 64.1
CANSAT25G0124 Cannabis sativa HOM05D000003 ORTHO05D009135 1.4e-52 209.9 156 64.7
CANSAT01G1354 Cannabis sativa HOM05D000003 ORTHO05D009135 1.8e-52 209.5 156 64.7
CANSAT80G2177 Cannabis sativa HOM05D000003 ORTHO05D009135 4.1e-52 208.4 156 64.7
CANSAT64G2935 Cannabis sativa HOM05D000003 ORTHO05D009135 6.5e-50 201.1 156 58.3
CANSAT54G2263 Cannabis sativa HOM05D000003 ORTHO05D009135 4.2e-49 198.4 156 57.7
CANSAT80G1498 Cannabis sativa HOM05D000003 ORTHO05D009135 2.1e-48 196.1 143 65.0
CANSAT21G1566 Cannabis sativa HOM05D000003 ORTHO05D009135 2.7e-48 195.7 156 57.7
CANSAT78G0547 Cannabis sativa HOM05D000003 ORTHO05D009135 2.4e-44 182.6 156 53.2
CANSAT11G2638 Cannabis sativa HOM05D000003 ORTHO05D009135 6.5e-42 174.5 156 51.9
CANSAT56G3921 Cannabis sativa HOM05D000003 ORTHO05D009135 8.5e-42 174.1 156 50.0
CANSAT64G1459 Cannabis sativa HOM05D000003 ORTHO05D009135 1.9e-41 172.9 146 56.8
CANSAT54G2053 Cannabis sativa HOM05D000003 ORTHO05D000004 1.2e-40 170.2 157 51.6
CANSAT80G0055 Cannabis sativa HOM05D000003 ORTHO05D000004 1.6e-40 169.9 157 49.7
CANSAT11G2464 Cannabis sativa HOM05D000003 ORTHO05D009135 2.7e-40 169.1 156 50.0
CANSAT56G1897 Cannabis sativa HOM05D000003 ORTHO05D009135 2.7e-40 169.1 156 51.3
CANSAT25G0840 Cannabis sativa HOM05D000003 ORTHO05D009135 3.6e-40 168.7 156 50.0
CANSAT25G1842 Cannabis sativa HOM05D000003 ORTHO05D009135 4.7e-40 168.3 156 51.3
CANSAT64G0259 Cannabis sativa HOM05D000003 ORTHO05D009135 4.7e-40 168.3 156 51.3
CANSAT56G3239 Cannabis sativa HOM05D000003 ORTHO05D009135 7.9e-40 167.5 156 51.9
CANSAT01G0111 Cannabis sativa HOM05D000003 ORTHO05D009135 1.0e-39 167.2 156 51.9
CANSAT21G1229 Cannabis sativa HOM05D000003 ORTHO05D009135 1.4e-39 166.8 157 50.3
CANSAT54G1958 Cannabis sativa HOM05D000003 ORTHO05D009135 1.4e-39 166.8 156 51.3
CANSAT21G2469 Cannabis sativa HOM05D000003 ORTHO05D009135 8.8e-39 164.1 156 49.4
CANSAT35G0741 Cannabis sativa HOM05D000003 ORTHO05D000004 1.1e-38 163.7 157 48.4
CANSAT25G0817 Cannabis sativa HOM05D000003 ORTHO05D009135 1.5e-38 163.3 156 50.6
CANSAT80G0717 Cannabis sativa HOM05D000003 ORTHO05D009135 1.5e-38 163.3 156 50.0
CANSAT11G1930 Cannabis sativa HOM05D000003 ORTHO05D009135 2.0e-38 162.9 156 48.7
CANSAT56G4095 Cannabis sativa HOM05D000003 ORTHO05D009135 3.3e-38 162.2 156 49.4
CANSAT78G2330 Cannabis sativa HOM05D000003 ORTHO05D000004 3.3e-38 162.2 156 50.0
CANSAT80G1739 Cannabis sativa HOM05D000003 ORTHO05D009135 3.3e-38 162.2 156 48.7
CANSAT56G3612 Cannabis sativa HOM05D000003 ORTHO05D009135 4.4e-38 161.8 157 47.8
CANSAT35G0351 Cannabis sativa HOM05D000003 ORTHO05D009135 5.7e-38 161.4 156 49.4
CANSAT35G0782 Cannabis sativa HOM05D000003 ORTHO05D000004 5.7e-38 161.4 156 49.4
CANSAT56G3302 Cannabis sativa HOM05D000003 ORTHO05D009135 5.7e-38 161.4 156 49.4
CANSAT25G2900 Cannabis sativa HOM05D000003 ORTHO05D009135 7.4e-38 161.0 156 48.7
CANSAT54G1284 Cannabis sativa HOM05D000003 ORTHO05D009135 7.4e-38 161.0 156 48.7
CANSAT78G0448 Cannabis sativa HOM05D000003 ORTHO05D009135 1.3e-37 160.2 156 49.4
CANSAT56G3372 Cannabis sativa HOM05D000003 ORTHO05D009135 1.7e-37 159.8 149 47.7
CANSAT80G2381 Cannabis sativa HOM05D000003 ORTHO05D009135 1.7e-37 159.8 156 48.1
CANSAT11G2108 Cannabis sativa HOM05D000003 ORTHO05D009135 2.8e-37 159.1 156 46.8
CANSAT78G1876 Cannabis sativa HOM05D000003 ORTHO05D009135 3.7e-37 158.7 156 51.3
CANSAT80G2845 Cannabis sativa HOM05D000003 ORTHO05D009135 4.8e-37 158.3 156 48.1
CANSAT25G2107 Cannabis sativa HOM05D000003 ORTHO05D000004 1.4e-36 156.8 156 50.0
CANSAT25G3181 Cannabis sativa HOM05D000003 ORTHO05D009135 1.8e-36 156.4 156 46.8
CANSAT21G0418 Cannabis sativa HOM05D000003 ORTHO05D009135 7.0e-36 154.5 157 45.9
CANSAT80G1247 Cannabis sativa HOM05D000003 ORTHO05D009135 7.0e-36 154.5 156 47.4
CANSAT54G0730 Cannabis sativa HOM05D000003 ORTHO05D009135 9.1e-36 154.1 156 47.4
CANSAT25G1317 Cannabis sativa HOM05D000003 ORTHO05D000004 1.2e-35 153.7 154 46.8
CANSAT11G1105 Cannabis sativa HOM05D000003 ORTHO05D000004 3.5e-35 152.1 156 46.2
CANSAT80G2469 Cannabis sativa HOM05D000003 ORTHO05D009135 1.1e-33 147.1 149 45.6
CANSAT80G1515 Cannabis sativa HOM05D000003 ORTHO05D009135 5.5e-33 144.8 156 45.5
CANSAT54G1882 Cannabis sativa HOM05D000003 ORTHO05D009135 9.4e-33 144.1 152 44.1
CANSAT35G0598 Cannabis sativa HOM05D000003 ORTHO05D009135 1.1e-28 130.6 126 46.8
CANSAT35G1320 Cannabis sativa HOM05D000003 ORTHO05D000004 3.2e-25 119.0 106 52.8
CANSAT01G2742 Cannabis sativa HOM05D000003 ORTHO05D009135 4.2e-25 118.6 87 64.4
CANSAT21G0795 Cannabis sativa HOM05D000003 ORTHO05D009135 8.8e-23 110.9 104 47.1
CANSAT25G1408 Cannabis sativa HOM05D000003 ORTHO05D009135 3.4e-22 109.0 123 43.9
CANSAT54G2588 Cannabis sativa HOM05D000003 ORTHO05D009135 3.4e-22 109.0 87 56.3
CANSAT80G0829 Cannabis sativa HOM05D000003 ORTHO05D009135 7.5e-22 107.8 86 59.3
CANSAT78G2405 Cannabis sativa HOM05D000003 ORTHO05D000004 4.8e-21 105.1 114 48.2
CANSAT78G1763 Cannabis sativa HOM05D000003 ORTHO05D000004 6.3e-21 104.8 102 50.0
CANSAT25G2466 Cannabis sativa HOM05D000003 ORTHO05D009135 9.1e-20 100.9 65 73.8
CANSAT11G1107 Cannabis sativa HOM05D000003 ORTHO05D009135 1.6e-19 100.1 156 35.3
CANSAT01G1668 Cannabis sativa HOM05D000003 ORTHO05D000004 2.3e-18 96.3 114 44.7
CANSAT80G1599 Cannabis sativa HOM05D000003 ORTHO05D009135 8.6e-18 94.4 82 50.0
CANSAT25G2265 Cannabis sativa HOM05D000003 ORTHO05D000004 1.9e-17 93.2 61 63.9
CANSAT01G1707 Cannabis sativa HOM05D000003 ORTHO05D000004 2.5e-17 92.8 90 48.9
CANSAT64G3001 Cannabis sativa HOM05D000003 ORTHO05D009135 4.7e-16 88.6 112 44.6
CANSAT25G1631 Cannabis sativa HOM05D000003 ORTHO05D009135 8.0e-16 87.8 80 48.8
CANSAT56G1411 Cannabis sativa HOM05D000003 ORTHO05D009135 7.5e-14 81.3 52 67.3
CANSAT21G0492 Cannabis sativa HOM05D000003 ORTHO05D000004 1.7e-13 80.1 147 31.3
PSO339G0361 Papaver somniferum HOM05D007919 ORTHO05D006738 4.9e-13 78.6 137 35.8
PSO478G4994 Papaver somniferum HOM05D007919 ORTHO05D006738 8.3e-13 77.8 150 32.0
PSO832G3082 Papaver somniferum HOM05D007919 ORTHO05D006738 1.8e-12 76.6 141 36.9
QL09p017510 Quercus lobata HOM05D000003 ORTHO05D000004 3.1e-12 75.9 130 37.7
QL07p019929 Quercus lobata HOM05D000003 ORTHO05D000004 4.1e-12 75.5 154 32.5
PSO478G2359 Papaver somniferum HOM05D007919 ORTHO05D006738 9.2e-12 74.3 132 34.8
CANSAT78G1176 Cannabis sativa HOM05D000003 ORTHO05D000004 1.6e-11 73.6 145 31.7
PSO017G4699 Papaver somniferum HOM05D007919 ORTHO05D006738 1.6e-11 73.6 157 29.3
PSO461G0002 Papaver somniferum HOM05D007919 ORTHO05D006738 1.6e-11 73.6 157 29.9
Hma1.2p1_0035F.1_g021825 Hydrangea macrophylla HOM05D000003 ORTHO05D000004 2.7e-11 72.8 144 29.2
CANSAT21G1000 Cannabis sativa HOM05D000003 ORTHO05D000004 3.5e-11 72.4 148 31.8
CANSAT01G1024 Cannabis sativa HOM05D000003 ORTHO05D009135 4.5e-11 72.0 145 33.1
PSO339G3265 Papaver somniferum HOM05D008740 ORTHO05D006738 1.7e-10 70.1 145 28.3
PSO675G7368 Papaver somniferum HOM05D007919 ORTHO05D006738 1.7e-10 70.1 157 28.0
PSO782G4427 Papaver somniferum HOM05D000003 ORTHO05D000004 1.7e-10 70.1 137 32.1
CANSAT11G0641 Cannabis sativa HOM05D000003 ORTHO05D009135 2.3e-10 69.7 145 31.7
PSO170G1593 Papaver somniferum HOM05D007919 ORTHO05D006738 3.8e-10 68.9 136 33.1
PSO541G4554 Papaver somniferum HOM05D007919 ORTHO05D006738 3.8e-10 68.9 140 32.9
PSO782G3402 Papaver somniferum HOM05D007919 ORTHO05D006738 3.8e-10 68.9 133 32.3
CANSAT80G2517 Cannabis sativa HOM05D000003 ORTHO05D000167 6.6e-10 68.2 146 37.7
PSO541G3800 Papaver somniferum HOM05D008740 ORTHO05D006738 1.1e-09 67.4 154 28.6
PSO339G5920 Papaver somniferum HOM05D007919 ORTHO05D006738 1.9e-09 66.6 132 31.1
CANSAT54G0984 Cannabis sativa HOM05D000003 ORTHO05D009135 3.3e-09 65.9 148 30.4
PSO210G2509 Papaver somniferum HOM05D007919 ORTHO05D006738 3.3e-09 65.9 139 30.9
PSO478G2225 Papaver somniferum HOM05D007919 ORTHO05D006738 3.3e-09 65.9 142 30.3
Lj2g0015378 Lotus japonicus HOM05D000003 ORTHO05D000925 5.6e-09 65.1 134 32.8
PSO675G2167 Papaver somniferum HOM05D007919 ORTHO05D006738 5.6e-09 65.1 156 30.1
PSO761G0259 Papaver somniferum HOM05D008740 ORTHO05D006738 5.6e-09 65.1 154 29.9
RcHm_v2.0_Chr7g0223051 Rosa chinensis HOM05D000003 ORTHO05D009449 5.6e-09 65.1 158 32.9
PSO384G1061 Papaver somniferum HOM05D007919 ORTHO05D006738 7.3e-09 64.7 157 28.7
CANSAT54G1357 Cannabis sativa HOM05D000003 ORTHO05D009135 2.1e-08 63.2 145 31.7
CANSAT21G1440 Cannabis sativa HOM05D000342 ORTHO05D009135 2.8e-08 62.8 57 47.4
CANSAT25G1150 Cannabis sativa HOM05D000003 ORTHO05D009135 2.8e-08 62.8 148 29.7
CANSAT35G1450 Cannabis sativa HOM05D000003 ORTHO05D000004 2.8e-08 62.8 154 28.6
PSO675G5608 Papaver somniferum HOM05D007919 ORTHO05D006738 2.8e-08 62.8 157 29.3
TWI73G0025 Tripterygium wilfordii HOM05D000003 ORTHO05D009135 2.8e-08 62.8 152 27.6
PSO764G0105 Papaver somniferum HOM05D007919 ORTHO05D006738 3.6e-08 62.4 143 31.5
CANSAT11G2393 Cannabis sativa HOM05D000003 ORTHO05D000004 4.7e-08 62.0 141 34.0
PSO782G4810 Papaver somniferum HOM05D007919 ORTHO05D006738 6.1e-08 61.6 135 29.6
CANSAT54G1748 Cannabis sativa HOM05D000003 ORTHO05D000004 1.0e-07 60.8 144 30.6
CANSAT54G2086 Cannabis sativa HOM05D000003 ORTHO05D000004 1.4e-07 60.5 147 29.3
CANSAT78G2242 Cannabis sativa HOM05D000003 ORTHO05D009135 1.8e-07 60.1 153 26.1
PSO063G0028 Papaver somniferum HOM05D007919 ORTHO05D006738 1.8e-07 60.1 144 31.9
PSO210G3055 Papaver somniferum HOM05D007919 ORTHO05D006738 2.3e-07 59.7 153 28.1
PSO357G0702 Papaver somniferum HOM05D008740 ORTHO05D006738 2.3e-07 59.7 154 30.5
Lj2g0001240 Lotus japonicus HOM05D000003 ORTHO05D000167 3.0e-07 59.3 137 32.1
vmacro21925 Vaccinium macrocarpon HOM05D001878 ORTHO05D001737 3.0e-07 59.3 131 35.1
Atru.chr9.658 Acer truncatum HOM05D000003 ORTHO05D000022 5.2e-07 58.5 161 31.1
CANSAT25G2803 Cannabis sativa HOM05D000003 ORTHO05D009135 5.2e-07 58.5 38 57.9
PSO017G1384 Papaver somniferum HOM05D007919 ORTHO05D006738 5.2e-07 58.5 152 28.3
PSO782G1037 Papaver somniferum HOM05D000017 ORTHO05D000013 5.2e-07 58.5 114 33.3
CANSAT64G2456 Cannabis sativa HOM05D000003 ORTHO05D000167 6.8e-07 58.2 136 32.4
Hma1.2p1_1255F.1_g270640 Hydrangea macrophylla HOM05D061138 ORTHO05D009135 6.8e-07 58.2 91 35.2
Hma1.2p1_1434F.1_g283106 Hydrangea macrophylla HOM05D061138 ORTHO05D009135 6.8e-07 58.2 91 35.2
PSO339G6096 Papaver somniferum HOM05D007919 ORTHO05D006738 8.9e-07 57.8 132 29.5
QL08p008347 Quercus lobata HOM05D000003 ORTHO05D009135 8.9e-07 57.8 81 37.0
Sed0013469 Sechium edule HOM05D000003 ORTHO05D000167 8.9e-07 57.8 145 30.3
CANSAT64G2141 Cannabis sativa HOM05D000003 ORTHO05D000004 1.2e-06 57.4 164 26.8
Lj6g0004382 Lotus japonicus HOM05D000003 ORTHO05D000004 1.2e-06 57.4 131 32.1
PSO339G1049 Papaver somniferum HOM05D007919 ORTHO05D006738 1.2e-06 57.4 107 34.6
PSO541G4887 Papaver somniferum HOM05D007919 ORTHO05D006738 1.2e-06 57.4 148 31.8
QL93p0138_0008 Quercus lobata HOM05D000003 ORTHO05D000167 1.2e-06 57.4 138 30.4
PSO210G7492 Papaver somniferum HOM05D007919 ORTHO05D006738 1.5e-06 57.0 140 30.7
PSO675G4995 Papaver somniferum HOM05D007919 ORTHO05D006738 1.5e-06 57.0 153 30.7
PSO210G2580 Papaver somniferum HOM05D007919 ORTHO05D006738 2.0e-06 56.6 126 27.0
RcHm_v2.0_Chr2g0115441 Rosa chinensis HOM05D008133 ORTHO05D009449 2.0e-06 56.6 159 27.7
PSO478G4658 Papaver somniferum HOM05D007919 ORTHO05D006738 2.6e-06 56.2 138 31.2
Sed0006726 Sechium edule HOM05D000003 ORTHO05D000167 2.6e-06 56.2 144 31.2
COL.COLO4_27602 Corchorus olitorius HOM05D013144 ORTHO05D009449 3.4e-06 55.8 134 32.1
PSO017G6016 Papaver somniferum HOM05D007979 ORTHO05D008897 3.4e-06 55.8 143 31.5
PSO063G1165 Papaver somniferum HOM05D008740 ORTHO05D006738 3.4e-06 55.8 160 27.5
PSO384G0598 Papaver somniferum HOM05D008740 ORTHO05D006738 3.4e-06 55.8 121 27.3
Atru.chr6.1438 Acer truncatum HOM05D000003 ORTHO05D000167 4.4e-06 55.5 138 30.4
PSO675G0578 Papaver somniferum HOM05D007919 ORTHO05D006738 4.4e-06 55.5 125 32.8
TAR063G0002 Trochodendron aralioides HOM05D009417 ORTHO05D011990 4.4e-06 55.5 141 31.9
TWI63G0799 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 5.8e-06 55.1 160 27.5
CANSAT54G2188 Cannabis sativa HOM05D000003 ORTHO05D009135 7.5e-06 54.7 87 39.1
CANSAT80G2799 Cannabis sativa HOM05D000003 ORTHO05D000004 7.5e-06 54.7 154 26.0
Manes.15G129687 Manihot esculenta HOM05D057327 ORTHO05D025811 7.5e-06 54.7 143 29.4
Sed0017531 Sechium edule HOM05D000003 ORTHO05D000126 7.5e-06 54.7 143 30.1
Lj7A406T59 Lonicera japonica HOM05D000003 ORTHO05D000167 9.8e-06 54.3 136 31.6
PSO170G2889 Papaver somniferum HOM05D007979 ORTHO05D008897 9.8e-06 54.3 143 30.1
PSO423G0288 Papaver somniferum HOM05D003407 ORTHO05D001026 9.8e-06 54.3 159 27.7
PSO675G0080 Papaver somniferum HOM05D003407 ORTHO05D001026 9.8e-06 54.3 140 30.7


User provided reference genes

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