Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G3024 Cannabis sativa HOM05D006341 ORTHO05D000377 1.4e-292 1008.8 489 100.0
Atru.chr5.3271 Acer truncatum HOM05D006341 ORTHO05D000377 2.5e-201 705.7 487 69.8
Dinv04950 Davidia involucrata HOM05D006341 ORTHO05D000377 4.3e-201 704.9 495 68.9
Duzib132G0346 Durio zibethinus HOM05D006341 ORTHO05D000377 1.6e-200 703.0 484 69.8
Ciclev10028267m.g Citrus clementina HOM05D006341 ORTHO05D000377 6.9e-199 697.6 496 67.1
Manes.11G082657 Manihot esculenta HOM05D006341 ORTHO05D000377 9.0e-199 697.2 489 69.9
Prupe.8G162700 Prunus persica HOM05D006341 ORTHO05D000377 7.6e-198 694.1 493 68.2
COL.COLO4_17298 Corchorus olitorius HOM05D006341 ORTHO05D000377 1.7e-197 693.0 484 68.4
Thecc.02G064100 Theobroma cacao HOM05D006341 ORTHO05D000377 8.4e-197 690.6 484 68.6
Potri.004G172100 Populus trichocarpa HOM05D006341 ORTHO05D000377 1.4e-196 689.9 498 68.7
Sabra04G0114400 Salix brachista HOM05D006341 ORTHO05D000377 1.9e-196 689.5 497 67.4
FvH4_2g01620 Fragaria vesca HOM05D006341 ORTHO05D000377 2.4e-196 689.1 492 68.7
TWI53G1223 Tripterygium wilfordii HOM05D006341 ORTHO05D000377 2.4e-196 689.1 498 67.1
MD05G1118100 Malus domestica HOM05D006341 ORTHO05D000377 4.2e-196 688.3 488 68.2
QL11p049167 Quercus lobata HOM05D006341 ORTHO05D000377 1.0e-194 683.7 480 69.0
RcHm_v2.0_Chr6g0244441 Rosa chinensis HOM05D006341 ORTHO05D000377 3.0e-194 682.2 483 68.1
RcHm_v2.0_Chr6g0244411 Rosa chinensis HOM05D006341 ORTHO05D000377 8.7e-194 680.6 484 68.8
Haze_02181 Corylus avellana HOM05D006341 ORTHO05D000377 9.6e-193 677.2 476 68.5
Hma1.2p1_0032F.1_g019570 Hydrangea macrophylla HOM05D006341 ORTHO05D000377 1.3e-192 676.8 497 65.8
CSS0004411 Camellia sinensis var. sinensis HOM05D006341 ORTHO05D000377 2.8e-192 675.6 501 66.3
Haze_02174 Corylus avellana HOM05D006341 ORTHO05D000377 2.8e-192 675.6 476 68.3
Gohir.D12G033900 Gossypium hirsutum HOM05D006341 ORTHO05D000377 4.8e-192 674.9 484 67.4
TAR381G0106 Trochodendron aralioides HOM05D006341 ORTHO05D000377 4.8e-192 674.9 493 65.9
Gorai.008G034900 Gossypium raimondii HOM05D006341 ORTHO05D000377 9.0e-191 670.6 484 66.9
Gohir.A12G038400 Gossypium hirsutum HOM05D006341 ORTHO05D000377 2.0e-190 669.5 484 66.7
COL.COLO4_17179 Corchorus olitorius HOM05D006341 ORTHO05D000377 2.6e-190 669.1 461 70.3
Nn7g37263 Nelumbo nucifera HOM05D006341 ORTHO05D000377 4.5e-190 668.3 495 65.3
Atru.chr5.3277 Acer truncatum HOM05D006341 ORTHO05D000377 2.5e-188 662.5 492 66.5
Oeu006673.1 Olea europaea HOM05D006341 ORTHO05D000377 1.0e-186 657.1 498 64.5
vmacro02264 Vaccinium macrocarpon HOM05D006341 ORTHO05D000377 1.1e-185 653.7 531 62.9
Cc06_g16120 Coffea canephora HOM05D006341 ORTHO05D000377 2.5e-185 652.5 496 64.9
PGR042G0052 Punica granatum HOM05D006341 ORTHO05D000377 2.4e-183 646.0 483 67.1
Actinidia00608 Actinidia chinensis HOM05D006341 ORTHO05D000377 2.9e-181 639.0 469 65.7
FAN20G2467 Fragaria x ananassa HOM05D006341 ORTHO05D000377 6.1e-179 631.3 448 68.3
TPR.G31245 Trifolium pratense HOM05D006341 ORTHO05D000377 1.3e-178 630.2 496 61.9
Lj4g0012983 Lotus japonicus HOM05D006341 ORTHO05D000377 8.7e-178 627.5 499 62.5
Aqoxy5G01641 Aquilegia oxysepala HOM05D006341 ORTHO05D000377 1.1e-177 627.1 484 62.6
CsaV3_7G000880 Cucumis sativus L. HOM05D006341 ORTHO05D000377 5.7e-177 624.8 501 62.9
FAN24G0408 Fragaria x ananassa HOM05D006341 ORTHO05D000377 7.4e-177 624.4 448 67.9
EL10Ac9g21414 Beta vulgaris HOM05D006341 ORTHO05D000377 1.6e-176 623.2 515 61.0
Hund06416 Selenicereus undatus HOM05D006341 ORTHO05D000377 6.3e-176 621.3 517 61.3
Psat7g085760 Pisum sativum HOM05D006341 ORTHO05D000377 9.0e-175 617.5 496 61.1
Sopen01g042030 Solanum pennellii HOM05D006341 ORTHO05D000377 2.0e-174 616.3 502 62.4
Solyc01g098460.4 Solanum lycopersicum HOM05D006341 ORTHO05D000377 5.9e-174 614.8 502 62.4
CAN.G134.236 Capsicum annuum HOM05D006341 ORTHO05D000377 1.7e-173 613.2 490 63.3
AUR62010072 Chenopodium quinoa HOM05D006341 ORTHO05D000377 1.7e-173 613.2 510 60.6
Lsat_1_v5_gn_8_124961 Lactuca sativa HOM05D006341 ORTHO05D000377 2.2e-173 612.8 482 61.8
Peaxi162Scf00434g00625 Petunia axillaris HOM05D006341 ORTHO05D000377 3.8e-173 612.1 496 62.3
Lj5A183G92 Lonicera japonica HOM05D006341 ORTHO05D000377 4.2e-172 608.6 460 65.7
Sc08g0003080 Simmondsia chinensis HOM05D006341 ORTHO05D000377 9.4e-172 607.4 509 60.3
MSTRG.16892 Avicennia marina HOM05D006341 ORTHO05D000377 1.6e-171 606.7 496 61.1
SGA_v2.0_scaffold58G20406 Striga asiatica HOM05D006341 ORTHO05D000377 1.8e-170 603.2 490 60.6
Rhsim11G0190600 Rhododendron simsii HOM05D006341 ORTHO05D000377 3.0e-170 602.4 501 61.7
THA.LOC104807791 Tarenaya hassleriana HOM05D006341 ORTHO05D000377 3.0e-170 602.4 493 60.9
MBI02_g27965_MAGBIO Magnolia biondii HOM05D006341 ORTHO05D000377 6.7e-170 601.3 489 61.6
SalBow1G4312 Salvia bowleyana HOM05D006341 ORTHO05D000377 1.5e-169 600.1 499 58.9
HanXRQChr17g0553851 Helianthus annuus HOM05D006341 ORTHO05D000377 7.4e-169 597.8 486 61.1
Dinv39489 Davidia involucrata HOM05D006341 ORTHO05D000377 9.7e-169 597.4 484 62.2
AL4G10160 Arabidopsis lyrata HOM05D006341 ORTHO05D000377 1.7e-168 596.7 485 61.4
Eucgr.G01768 Eucalyptus grandis HOM05D006341 ORTHO05D000377 1.7e-168 596.7 498 60.2
arahy.Tifrunner.gnm1.ann1.MR7L4V Arachis hypogaea HOM05D006341 ORTHO05D000377 1.8e-167 593.2 497 59.6
GSVIVG01024058001 Vitis vinifera HOM05D006341 ORTHO05D000377 4.1e-167 592.0 482 61.2
arahy.Tifrunner.gnm1.ann1.UN7M5W Arachis hypogaea HOM05D006341 ORTHO05D000377 1.2e-166 590.5 490 60.4
Carub.0003s3491 Capsella rubella HOM05D006341 ORTHO05D000377 1.2e-166 590.5 489 60.3
Migut.B00102 Erythranthe guttata HOM05D006341 ORTHO05D000377 2.0e-166 589.7 486 59.9
Ca_18243_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 2.6e-166 589.3 479 60.5
Thhalv10000146m.g Eutrema salsugineum HOM05D006341 ORTHO05D000377 5.9e-166 588.2 494 60.1
AT2G21070 Arabidopsis thaliana HOM05D006341 ORTHO05D000377 7.7e-166 587.8 490 60.6
Nitab4.5_0001423g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 1.9e-164 583.2 485 61.0
Sed0009186 Sechium edule HOM05D006341 ORTHO05D000377 3.2e-164 582.4 454 64.1
Sp4g00210 Schrenkiella parvula HOM05D006341 ORTHO05D000377 4.2e-164 582.0 493 59.6
ECA233G1460 Erigeron canadensis HOM05D006341 ORTHO05D000377 9.4e-164 580.9 462 62.3
MELO3C013369.2 Cucumis melo HOM05D006341 ORTHO05D000377 1.2e-163 580.5 453 63.1
Glyma.08G087700 Glycine max HOM05D006341 ORTHO05D000377 3.6e-163 578.9 492 59.6
CARHR111910 Cardamine hirsuta HOM05D006341 ORTHO05D000377 6.1e-163 578.2 486 60.1
BcaB06g27766 Brassica carinata HOM05D006341 ORTHO05D000377 7.9e-163 577.8 485 59.4
C04p50300 Brassica napus HOM05D006341 ORTHO05D000377 6.7e-162 574.7 484 59.3
BolC4t26628H Brassica oleracea HOM05D006341 ORTHO05D000377 6.7e-162 574.7 484 59.3
Aa31LG7G15600 Aethionema arabicum HOM05D006341 ORTHO05D000377 2.6e-161 572.8 471 60.9
Lalb_Chr13g0293551 Lupinus albus HOM05D006341 ORTHO05D000377 1.3e-160 570.5 521 55.9
BraA04t17219Z Brassica rapa HOM05D006341 ORTHO05D000377 1.7e-160 570.1 484 58.9
A04p15870 Brassica napus HOM05D006341 ORTHO05D000377 4.5e-158 562.0 488 58.2
Ah.01g008830 Amaranthus hybridus HOM05D006341 ORTHO05D000377 5.0e-157 558.5 490 58.6
ClCG02G004230 Citrullus lanatus HOM05D006341 ORTHO05D000377 1.1e-156 557.4 522 57.7
Nitab4.5_0001903g0070 Nicotiana tabacum HOM05D006341 ORTHO05D000377 1.5e-156 557.0 459 60.3
Glyma.05G133200 Glycine max HOM05D006341 ORTHO05D000377 6.1e-155 551.6 496 56.5
unitig_60.g25823 Utricularia gibba HOM05D006341 ORTHO05D000377 6.1e-155 551.6 491 56.6
CDE05G1540 Ceratophyllum demersum HOM05D006341 ORTHO05D000377 3.7e-152 542.3 503 54.3
VMungo0251G3227 Vigna mungo HOM05D006341 ORTHO05D000377 3.1e-151 539.3 449 60.8
Os02g0121200 Oryza sativa ssp. japonica HOM05D006341 ORTHO05D000377 1.3e-149 533.9 485 55.9
HPP92_014019 Vanilla planifolia HOM05D006341 ORTHO05D000377 1.7e-149 533.5 494 54.7
QL11p048584 Quercus lobata HOM05D006341 ORTHO05D000377 1.5e-148 530.4 431 61.9
ATR0810G159 Amborella trichopoda HOM05D006341 ORTHO05D000377 4.0e-146 522.3 509 53.0
SHI05717 Sapria himalayana HOM05D006341 ORTHO05D000377 4.0e-146 522.3 504 54.2
Phvul.002G189600 Phaseolus vulgaris HOM05D006341 ORTHO05D000377 1.2e-142 510.8 490 55.7
SEGI_13829 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 3.5e-134 482.6 501 49.5
SEGI_22420 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 3.5e-134 482.6 501 49.5
Cpa.g.sc37.173 Carica papaya HOM05D006341 ORTHO05D000377 8.9e-130 468.0 486 52.3
Potri.009G131700 Populus trichocarpa HOM05D006341 ORTHO05D000377 7.8e-126 454.9 308 69.5
AagrBONN_evm.TU.Sc2ySwM_228.2682 Anthoceros agrestis HOM05D006341 ORTHO05D000377 2.1e-123 446.8 481 47.4
Mapoly0085s0033 Marchantia polymorpha HOM05D006341 ORTHO05D000377 1.0e-122 444.5 558 44.1
CiPaw.06G124100 Carya illinoinensis HOM05D006341 ORTHO05D000377 2.0e-121 440.3 351 63.5
Pp3c8_21040 Physcomitrium patens HOM05D006341 ORTHO05D000377 1.3e-117 427.6 551 42.6
Zm00001eb208320 Zea mays HOM05D006341 ORTHO05D000377 1.8e-114 417.2 406 52.2
Ca_18241_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 8.6e-109 398.3 482 46.9
Atru.chr5.3221 Acer truncatum HOM05D006341 ORTHO05D000377 7.3e-108 395.2 278 69.1
Nitab4.5_0008354g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 5.1e-101 372.5 354 55.6
SMO169G0079 Selaginella moellendorffii HOM05D006341 ORTHO05D000377 6.6e-101 372.1 487 43.3
Carub.0004s0010 Capsella rubella HOM05D006341 ORTHO05D000377 1.6e-99 367.5 490 44.1
FAN22G0308 Fragaria x ananassa HOM05D003409 ORTHO05D004015 4.5e-89 332.8 280 60.0
Sabra09G0102100 Salix brachista HOM05D006341 ORTHO05D000377 2.8e-67 260.4 312 47.4
MCO01G168 Micromonas commoda HOM05D006341 ORTHO05D000377 2.2e-64 250.8 320 40.3
PGSC0003DMG401028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 1.0e-61 241.9 143 76.9
Cre01.g044150 Chlamydomonas reinhardtii HOM05D006341 ORTHO05D000377 1.8e-58 231.1 386 34.5
CBR_g23939 Chara braunii HOM05D006341 ORTHO05D000377 3.2e-47 193.7 808 23.8
PRCOL_00006207 Prasinoderma coloniale HOM05D006341 ORTHO05D000377 5.0e-40 169.9 338 32.0
FAN07G1625 Fragaria x ananassa HOM05D006341 ORTHO05D000377 1.4e-37 161.8 111 69.4
PGSC0003DMG402028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 3.1e-34 150.6 116 62.9
Actinidia20497 Actinidia chinensis HOM05D006341 ORTHO05D000377 7.0e-26 122.9 77 72.7
FAN07G2354 Fragaria x ananassa HOM05D006341 ORTHO05D000377 1.6e-25 121.7 145 49.0
Oeu063293.1 Olea europaea HOM05D006341 ORTHO05D000377 3.8e-24 117.1 137 48.9
Atru.chr5.3222 Acer truncatum HOM05D006341 ORTHO05D000377 3.4e-12 77.4 60 61.7


User provided reference genes

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