Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G2804 Cannabis sativa HOM05D005002 ORTHO05D006016 9.7e-90 333.6 181 100.0
CSS0022428 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 6.1e-60 234.6 137 85.4
CSS0035568 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 8.0e-60 234.2 137 85.4
RcHm_v2.0_Chr6g0269591 Rosa chinensis HOM05D005002 ORTHO05D006016 1.8e-59 233.0 137 88.3
MD08G1049200 Malus domestica HOM05D005002 ORTHO05D006016 3.0e-59 232.3 137 86.1
QL01p029339 Quercus lobata HOM05D005002 ORTHO05D006016 3.0e-59 232.3 135 84.4
GSVIVG01023467001 Vitis vinifera HOM05D005002 ORTHO05D006016 3.0e-59 232.3 137 85.4
Duzib168G1293 Durio zibethinus HOM05D005002 ORTHO05D006016 4.0e-59 231.9 137 83.9
Dinv03972 Davidia involucrata HOM05D005002 ORTHO05D006016 8.8e-59 230.7 137 83.2
Dinv03977 Davidia involucrata HOM05D005002 ORTHO05D006016 1.5e-58 229.9 137 82.5
Ciclev10009813m.g Citrus clementina HOM05D005002 ORTHO05D006016 2.0e-58 229.6 144 83.3
Thecc.09G010700 Theobroma cacao HOM05D005002 ORTHO05D006016 2.0e-58 229.6 137 83.2
GSVIVG01023464001 Vitis vinifera HOM05D005002 ORTHO05D006016 2.0e-58 229.6 137 83.2
Prupe.1G399400 Prunus persica HOM05D005002 ORTHO05D006016 3.3e-58 228.8 133 88.0
Oeu008768.2 Olea europaea HOM05D005002 ORTHO05D006016 9.7e-58 227.3 135 82.2
TAR622G0454 Trochodendron aralioides HOM05D005002 ORTHO05D006016 9.7e-58 227.3 137 81.0
Actinidia03570 Actinidia chinensis HOM05D005002 ORTHO05D006016 1.3e-57 226.9 137 81.0
EL10Ac2g02432 Beta vulgaris HOM05D005002 ORTHO05D006016 1.3e-57 226.9 132 84.8
CSS0010222 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 1.3e-57 226.9 137 83.9
Gohir.A05G062833 Gossypium hirsutum HOM05D005002 ORTHO05D006016 1.3e-57 226.9 137 81.8
Gohir.A05G062900 Gossypium hirsutum HOM05D005002 ORTHO05D006016 1.3e-57 226.9 137 81.8
Gohir.A07G034400 Gossypium hirsutum HOM05D005002 ORTHO05D006016 1.3e-57 226.9 137 81.8
Gohir.D07G038000 Gossypium hirsutum HOM05D005002 ORTHO05D006016 1.3e-57 226.9 137 81.8
Gorai.001G039800 Gossypium raimondii HOM05D005002 ORTHO05D006016 1.3e-57 226.9 137 81.8
Manes.03G005700 Manihot esculenta HOM05D005002 ORTHO05D006016 1.3e-57 226.9 136 83.1
TWI34G0825 Tripterygium wilfordii HOM05D005002 ORTHO05D006016 1.3e-57 226.9 136 85.3
CAN.G566.59 Capsicum annuum HOM05D005002 ORTHO05D006016 1.7e-57 226.5 136 81.6
vmacro05092 Vaccinium macrocarpon HOM05D005002 ORTHO05D006016 2.2e-57 226.1 138 81.9
VMungo1383G3578 Vigna mungo HOM05D005002 ORTHO05D006016 2.2e-57 226.1 137 82.5
Glyma.11G160400 Glycine max HOM05D005002 ORTHO05D006016 2.8e-57 225.7 137 81.8
Glyma.18G054400 Glycine max HOM05D005002 ORTHO05D006016 3.7e-57 225.3 137 81.8
Gohir.D05G065400 Gossypium hirsutum HOM05D005002 ORTHO05D006016 3.7e-57 225.3 137 81.0
Gorai.009G066200 Gossypium raimondii HOM05D005002 ORTHO05D006016 3.7e-57 225.3 137 81.0
Nitab4.5_0001110g0170 Nicotiana tabacum HOM05D005002 ORTHO05D006016 3.7e-57 225.3 144 79.2
Solyc12g096470.2 Solanum lycopersicum HOM05D005002 ORTHO05D006016 4.8e-57 224.9 139 80.6
Sopen12g032300 Solanum pennellii HOM05D005002 ORTHO05D006016 4.8e-57 224.9 139 80.6
PGSC0003DMG400029278 Solanum tuberosum HOM05D005002 ORTHO05D006016 4.8e-57 224.9 139 80.6
VMungo1383G2539 Vigna mungo HOM05D005002 ORTHO05D006016 4.8e-57 224.9 176 67.6
Peaxi162Scf00459g00833 Petunia axillaris HOM05D005002 ORTHO05D006016 1.4e-56 223.4 133 82.7
FvH4_2g11240 Fragaria vesca HOM05D005002 ORTHO05D006016 1.8e-56 223.0 145 82.1
Phvul.008G002400 Phaseolus vulgaris HOM05D005002 ORTHO05D006016 2.4e-56 222.6 137 81.0
Rhsim07G0172200 Rhododendron simsii HOM05D001416 ORTHO05D005885 2.4e-56 222.6 137 81.8
ClCG08G013890 Citrullus lanatus HOM05D005002 ORTHO05D006016 4.1e-56 221.9 137 81.0
Cc00_g22050 Coffea canephora HOM05D005002 ORTHO05D006016 5.3e-56 221.5 135 80.0
Lalb_Chr08g0234011 Lupinus albus HOM05D005002 ORTHO05D006016 5.3e-56 221.5 137 81.0
QL02p017669 Quercus lobata HOM05D005002 ORTHO05D006016 5.3e-56 221.5 135 81.5
TWI63G0754 Tripterygium wilfordii HOM05D005002 ORTHO05D006016 7.0e-56 221.1 159 74.2
PGR044G1228 Punica granatum HOM05D005002 ORTHO05D006016 1.2e-55 220.3 129 83.7
Nn3g17630 Nelumbo nucifera HOM05D005002 ORTHO05D006016 1.6e-55 219.9 138 80.4
Sed0003546 Sechium edule HOM05D005002 ORTHO05D006016 1.6e-55 219.9 137 79.6
arahy.Tifrunner.gnm1.ann1.1V29TX Arachis hypogaea HOM05D005002 ORTHO05D006016 4.5e-55 218.4 137 81.8
AT4G31720 Arabidopsis thaliana HOM05D005002 ORTHO05D006016 5.9e-55 218.0 137 81.8
BcaC09g51961 Brassica carinata HOM05D005002 ORTHO05D006016 5.9e-55 218.0 137 81.8
C01p07220 Brassica napus HOM05D005002 ORTHO05D006016 5.9e-55 218.0 137 81.8
BolC1t00713H Brassica oleracea HOM05D005002 ORTHO05D006016 5.9e-55 218.0 137 81.8
Lj1g0025268 Lotus japonicus HOM05D005002 ORTHO05D006016 5.9e-55 218.0 132 82.6
AL7G20310 Arabidopsis lyrata HOM05D005002 ORTHO05D006016 7.7e-55 217.6 137 81.8
Migut.A00405 Erythranthe guttata HOM05D005002 ORTHO05D006016 7.7e-55 217.6 132 81.1
Sp7g29520 Schrenkiella parvula HOM05D005002 ORTHO05D006016 7.7e-55 217.6 137 81.8
BcaNung05179 Brassica carinata HOM05D005002 ORTHO05D006016 1.7e-54 216.5 137 81.0
A01p06560 Brassica napus HOM05D005002 ORTHO05D006016 1.7e-54 216.5 137 81.0
BraA01t00615Z Brassica rapa HOM05D005002 ORTHO05D006016 1.7e-54 216.5 137 81.0
Medtr7g080740 Medicago truncatula HOM05D005002 ORTHO05D006016 1.7e-54 216.5 140 77.9
Thhalv10026546m.g Eutrema salsugineum HOM05D005002 ORTHO05D006016 3.8e-54 215.3 137 80.3
BraA08t33811Z Brassica rapa HOM05D005002 ORTHO05D006016 8.5e-54 214.2 137 80.3
Lalb_Chr10g0091021 Lupinus albus HOM05D005002 ORTHO05D006016 8.5e-54 214.2 138 80.4
Carub.0007s0884 Capsella rubella HOM05D005002 ORTHO05D006016 1.1e-53 213.8 137 79.6
Potri.018G013300 Populus trichocarpa HOM05D005002 ORTHO05D006016 1.1e-53 213.8 123 88.6
FAN24G1669 Fragaria x ananassa HOM05D005002 ORTHO05D006016 1.5e-53 213.4 158 74.1
MSTRG.25811 Avicennia marina HOM05D005002 ORTHO05D006016 1.9e-53 213.0 129 81.4
Eucgr.B03202 Eucalyptus grandis HOM05D005002 ORTHO05D006016 1.9e-53 213.0 132 78.8
Aa31LG2G18620 Aethionema arabicum HOM05D005002 ORTHO05D006016 2.5e-53 212.6 137 78.8
Sabra18G0017200 Salix brachista HOM05D005002 ORTHO05D006016 2.5e-53 212.6 123 87.8
Sed0020410 Sechium edule HOM05D005002 ORTHO05D006016 2.5e-53 212.6 137 76.6
THA.LOC104819944 Tarenaya hassleriana HOM05D005002 ORTHO05D006016 2.5e-53 212.6 137 78.8
TPR.G12644 Trifolium pratense HOM05D005002 ORTHO05D006016 3.2e-53 212.2 142 77.5
HanXRQChr14g0453401 Helianthus annuus HOM05D005002 ORTHO05D006016 5.5e-53 211.5 137 75.2
Psat0s2083g0280 Pisum sativum HOM05D005002 ORTHO05D006016 5.5e-53 211.5 140 75.0
TPR.G15628 Trifolium pratense HOM05D005002 ORTHO05D006016 9.4e-53 210.7 144 75.7
A08p18490 Brassica napus HOM05D005002 ORTHO05D006016 1.6e-52 209.9 137 78.1
arahy.Tifrunner.gnm1.ann1.JDP7FN Arachis hypogaea HOM05D005002 ORTHO05D006016 2.1e-52 209.5 144 77.1
THA.LOC104803866 Tarenaya hassleriana HOM05D005002 ORTHO05D006016 3.6e-52 208.8 137 78.8
Lsat_1_v5_gn_6_32161 Lactuca sativa HOM05D005002 ORTHO05D006016 4.7e-52 208.4 144 70.8
HanXRQChr07g0195931 Helianthus annuus HOM05D005002 ORTHO05D006016 8.0e-52 207.6 137 73.7
BcaB03g12714 Brassica carinata HOM05D005002 ORTHO05D006016 1.4e-51 206.8 137 78.1
DCAR_020711 Daucus carota HOM05D004285 ORTHO05D006016 3.0e-51 205.7 129 78.3
RcHm_v2.0_Chr2g0161651 Rosa chinensis HOM05D005002 ORTHO05D006016 4.0e-51 205.3 128 82.0
ECA238G2697 Erigeron canadensis HOM05D005002 ORTHO05D006016 5.2e-51 204.9 135 73.3
DCAR_020712 Daucus carota HOM05D005002 ORTHO05D006016 6.8e-51 204.5 128 78.9
MD15G1045700 Malus domestica HOM05D005002 ORTHO05D006016 1.5e-50 203.4 137 77.4
PSO478G2205 Papaver somniferum HOM05D005002 ORTHO05D006016 2.6e-50 202.6 140 75.7
PSO782G1729 Papaver somniferum HOM05D005002 ORTHO05D006016 2.6e-50 202.6 140 75.7
Sc23g0006270 Simmondsia chinensis HOM05D005002 ORTHO05D006016 2.6e-50 202.6 137 75.2
unitig_92.g28144 Utricularia gibba HOM05D003482 ORTHO05D004194 4.4e-50 201.8 133 73.7
Cfa017847 Carpinus fangiana HOM05D005002 ORTHO05D006016 5.7e-50 201.4 137 77.4
Aqoxy7G00066 Aquilegia oxysepala HOM05D005002 ORTHO05D006016 1.7e-49 199.9 123 79.7
HPP92_000490 Vanilla planifolia HOM05D005002 ORTHO05D006016 4.8e-49 198.4 131 75.6
ATR0691G047 Amborella trichopoda HOM05D005002 ORTHO05D006016 1.2e-47 193.7 131 71.8
BcaC01g01070 Brassica carinata HOM05D005002 ORTHO05D006016 1.2e-47 193.7 125 80.0
C03p87650 Brassica napus HOM05D005002 ORTHO05D006016 1.2e-47 193.7 125 80.0
CDE04G1191 Ceratophyllum demersum HOM05D005002 ORTHO05D006016 1.2e-47 193.7 131 71.8
CSS0031521 Camellia sinensis var. sinensis HOM05D005002 ORTHO05D006016 2.3e-46 189.5 110 87.3
Os09g0431500 Oryza sativa ssp. japonica HOM05D005002 ORTHO05D006016 2.3e-46 189.5 128 70.3
Haze_18362 Corylus avellana HOM05D005002 ORTHO05D006016 1.2e-44 183.7 110 85.5
FAN15G1411 Fragaria x ananassa HOM05D000348 ORTHO05D000244 1.2e-44 183.7 106 88.7
Zm00001eb313590 Zea mays HOM05D005002 ORTHO05D006016 2.8e-44 182.6 124 70.2
Actinidia14152 Actinidia chinensis HOM05D005002 ORTHO05D006016 6.1e-44 181.4 110 81.8
AUR62020301 Chenopodium quinoa HOM05D005002 ORTHO05D006016 6.1e-44 181.4 109 83.5
Hma1.2p1_0192F.1_g083460 Hydrangea macrophylla HOM05D005002 ORTHO05D006016 6.1e-44 181.4 110 83.6
MELO3C011321.2 Cucumis melo HOM05D005002 ORTHO05D006016 8.0e-44 181.0 124 77.4
AUR62037698 Chenopodium quinoa HOM05D005002 ORTHO05D006016 2.3e-43 179.5 109 82.6
SalBow4G2991 Salvia bowleyana HOM05D005002 ORTHO05D006016 3.4e-42 175.6 106 86.8
BcaC09g51955 Brassica carinata HOM05D005002 ORTHO05D006016 1.7e-41 173.3 127 72.4
Ah.09g224730 Amaranthus hybridus HOM05D005002 ORTHO05D006016 2.2e-41 172.9 145 65.5
Ca_06528_v3 Cicer arietinum L. HOM05D005002 ORTHO05D006016 4.5e-39 165.2 113 77.0
BolC3t21083H Brassica oleracea HOM05D000888 ORTHO05D000740 7.8e-39 164.5 110 79.1
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 9.5e-37 157.5 106 72.6
BcaC09g51957 Brassica carinata HOM05D005002 ORTHO05D006016 1.0e-35 154.1 140 65.7
Mapoly0011s0105 Marchantia polymorpha HOM05D005002 ORTHO05D006016 9.8e-34 147.5 118 64.4
Pp3c6_16040 Physcomitrium patens HOM05D005002 ORTHO05D006016 9.8e-34 147.5 115 62.6
unitig_93.g30701 Utricularia gibba HOM05D005002 ORTHO05D006016 4.9e-33 145.2 133 57.9
Lju41A41T35 Lonicera japonica HOM05D005002 ORTHO05D006016 4.1e-32 142.1 182 47.8
Duzib168G1591 Durio zibethinus HOM05D005002 ORTHO05D006016 7.0e-32 141.4 84 86.9
COL.COLO4_19003 Corchorus olitorius HOM05D005002 ORTHO05D006016 9.2e-32 141.0 87 83.9
COL.COLO4_21113 Corchorus olitorius HOM05D005002 ORTHO05D006016 1.6e-31 140.2 101 69.3
RcHm_v2.0_Chr2g0161711 Rosa chinensis HOM05D005002 ORTHO05D006016 3.9e-30 135.6 84 84.5
MSTRG.9875 Avicennia marina HOM05D005002 ORTHO05D006016 1.5e-29 133.7 84 81.0
CARHR239610 Cardamine hirsuta HOM05D005002 ORTHO05D006016 1.4e-27 127.1 84 82.1
Duzib187G1493 Durio zibethinus HOM05D005002 ORTHO05D006016 1.4e-27 127.1 86 77.9
Duzib150G1286 Durio zibethinus HOM05D005002 ORTHO05D006016 3.4e-26 122.5 73 80.8
MBI15_g18374_MAGBIO Magnolia biondii HOM05D005002 ORTHO05D006016 9.8e-26 120.9 132 54.5
Aqoxy7G00833 Aquilegia oxysepala HOM05D005002 ORTHO05D006016 2.9e-25 119.4 70 80.0
CBR_g30254 Chara braunii HOM05D005002 ORTHO05D006016 1.9e-24 116.7 104 52.9
SGA_v2.0_scaffold193G40677 Striga asiatica HOM05D005002 ORTHO05D006016 2.1e-23 113.2 93 64.5
SMO141G0065 Selaginella moellendorffii HOM05D005002 ORTHO05D006016 7.8e-23 111.3 120 55.0
SMO356G0735 Selaginella moellendorffii HOM05D005002 ORTHO05D006016 2.5e-21 106.3 114 48.2
Nitab4.5_0000668g0030 Nicotiana tabacum HOM05D005002 ORTHO05D006016 7.3e-21 104.8 64 78.1
Lalb_Chr08g0233981 Lupinus albus HOM05D005002 ORTHO05D006016 9.5e-21 104.4 65 78.5
Lalb_Chr08g0233961 Lupinus albus HOM05D005002 ORTHO05D006016 3.4e-18 95.9 53 81.1
CiPaw.15G092700 Carya illinoinensis HOM05D005002 ORTHO05D006016 5.8e-18 95.1 53 81.1
FAN27G2219 Fragaria x ananassa HOM05D005002 ORTHO05D006016 6.4e-17 91.7 50 88.0
PRCOL_00006189 Prasinoderma coloniale HOM05D005002 ORTHO05D006016 6.4e-17 91.7 121 38.8
QL12p013723 Quercus lobata HOM05D005002 ORTHO05D006016 9.2e-16 87.8 56 82.1
COL.COLO4_27723 Corchorus olitorius HOM05D005002 ORTHO05D006016 1.6e-15 87.0 52 73.1
FAN20G1660 Fragaria x ananassa HOM05D005002 ORTHO05D006016 2.7e-15 86.3 61 73.8
SEGI_02469 Sequoiadendron giganteum HOM05D005002 ORTHO05D006016 6.0e-15 85.1 64 68.8
EL10Ac5g10893 Beta vulgaris HOM05D005002 ORTHO05D006016 1.1e-13 80.9 45 80.0
Phvul.009G222000 Phaseolus vulgaris HOM05D005002 ORTHO05D006016 1.1e-13 80.9 77 54.5
MCO01G145 Micromonas commoda HOM05D005002 ORTHO05D006016 3.3e-13 79.3 121 38.8
Actinidia25736 Actinidia chinensis HOM05D005002 ORTHO05D006016 7.6e-10 68.2 88 47.7
HanXRQChr14g0435251 Helianthus annuus HOM05D005002 ORTHO05D006016 1.2e-07 60.8 40 72.5
SEGI_34318 Sequoiadendron giganteum HOM05D005002 ORTHO05D006016 6.6e-06 55.1 67 46.3


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