Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G2101 Cannabis sativa HOM05D007177 ORTHO05D008984 4.7e-163 577.8 288 100.0
QL12p031282 Quercus lobata HOM05D007177 ORTHO05D008984 7.8e-118 427.6 299 74.9
CiPaw.08G015800 Carya illinoinensis HOM05D007177 ORTHO05D008984 1.6e-115 419.9 298 73.2
Potri.006G246500 Populus trichocarpa HOM05D007177 ORTHO05D008984 1.4e-114 416.8 291 72.5
Sabra06G0192800 Salix brachista HOM05D007177 ORTHO05D008984 2.4e-114 416.0 298 72.5
Manes.16G068300 Manihot esculenta HOM05D007177 ORTHO05D008984 5.2e-114 414.8 300 70.7
Atru.chr7.2324 Acer truncatum HOM05D007177 ORTHO05D008984 8.9e-114 414.1 247 81.4
CiPaw.07G217700 Carya illinoinensis HOM05D007177 ORTHO05D008984 1.2e-113 413.7 289 74.0
RcHm_v2.0_Chr6g0312741 Rosa chinensis HOM05D007177 ORTHO05D008984 3.4e-113 412.1 294 72.1
Dinv35881 Davidia involucrata HOM05D007177 ORTHO05D008984 7.6e-113 411.0 249 81.1
Gohir.D06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 3.8e-112 408.7 298 71.8
Gorai.010G053800 Gossypium raimondii HOM05D007177 ORTHO05D008984 3.8e-112 408.7 298 71.8
Gohir.A06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 4.9e-112 408.3 298 71.8
Thecc.09G144000 Theobroma cacao HOM05D007177 ORTHO05D008984 4.9e-112 408.3 295 72.5
MD08G1136300 Malus domestica HOM05D007177 ORTHO05D008984 1.1e-111 407.1 292 71.2
Duzib168G0166 Durio zibethinus HOM05D007177 ORTHO05D008984 2.4e-111 406.0 303 70.6
GSVIVG01035726001 Vitis vinifera HOM05D007177 ORTHO05D008984 3.2e-111 405.6 280 72.1
Sed0014124 Sechium edule HOM05D007177 ORTHO05D008984 9.3e-111 404.1 275 74.2
FAN27G1396 Fragaria x ananassa HOM05D007177 ORTHO05D008984 4.6e-110 401.7 294 71.1
TAR383G0793 Trochodendron aralioides HOM05D007177 ORTHO05D008984 4.6e-110 401.7 294 71.1
Lj7A712G53 Lonicera japonica HOM05D007177 ORTHO05D008984 6.0e-110 401.4 249 79.1
Eucgr.G02593 Eucalyptus grandis HOM05D007177 ORTHO05D008984 7.8e-110 401.0 250 78.0
FvH4_2g30170 Fragaria vesca HOM05D007177 ORTHO05D008984 1.3e-109 400.2 294 70.7
Ciclev10009098m.g Citrus clementina HOM05D007177 ORTHO05D008984 3.0e-109 399.1 297 69.7
Hma1.2p1_0175F.1_g077220 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 8.7e-109 397.5 287 71.4
CSS0040333 Camellia sinensis var. sinensis HOM05D007177 ORTHO05D008984 1.1e-108 397.1 300 69.3
Hund26404 Selenicereus undatus HOM05D007177 ORTHO05D008984 1.1e-108 397.1 275 72.4
TWI32G0279 Tripterygium wilfordii HOM05D007177 ORTHO05D008984 7.3e-108 394.4 293 69.6
MELO3C011212.2 Cucumis melo HOM05D007177 ORTHO05D008984 2.8e-107 392.5 292 71.2
CsaV3_2G031600 Cucumis sativus L. HOM05D007177 ORTHO05D008984 6.2e-107 391.3 292 70.5
DCAR_006262 Daucus carota HOM05D007177 ORTHO05D008984 1.4e-106 390.2 290 68.6
Lsat_1_v5_gn_6_10880 Lactuca sativa HOM05D003107 ORTHO05D008984 1.4e-106 390.2 246 77.6
Nitab4.5_0009600g0010 Nicotiana tabacum HOM05D007177 ORTHO05D008984 1.8e-106 389.8 272 72.1
HanXRQChr02g0048101 Helianthus annuus HOM05D007177 ORTHO05D008984 3.1e-106 389.0 306 66.7
CAN.G21.13 Capsicum annuum HOM05D007177 ORTHO05D008984 9.0e-106 387.5 246 76.8
MD15G1115400 Malus domestica HOM05D007177 ORTHO05D008984 9.0e-106 387.5 261 72.4
Nitab4.5_0000125g0190 Nicotiana tabacum HOM05D007177 ORTHO05D008984 9.0e-106 387.5 274 71.2
Ah.10g025430 Amaranthus hybridus HOM05D007177 ORTHO05D008984 3.4e-105 385.6 286 69.2
ECA233G2849 Erigeron canadensis HOM05D003107 ORTHO05D008984 9.9e-105 384.0 295 67.5
Nn8g39274 Nelumbo nucifera HOM05D007177 ORTHO05D008984 1.3e-104 383.6 283 70.3
Solyc08g067840.3 Solanum lycopersicum HOM05D007177 ORTHO05D008984 1.3e-104 383.6 295 68.8
Migut.A00273 Erythranthe guttata HOM05D007177 ORTHO05D008984 1.7e-104 383.3 290 66.9
Sopen08g021780 Solanum pennellii HOM05D007177 ORTHO05D008984 1.7e-104 383.3 247 77.3
THA.LOC104815045 Tarenaya hassleriana HOM05D007177 ORTHO05D008984 4.9e-104 381.7 293 65.5
Lalb_Chr23g0269021 Lupinus albus HOM05D007177 ORTHO05D008984 1.1e-103 380.6 295 67.8
Cpa.g.sc91.5 Carica papaya HOM05D007177 ORTHO05D008984 1.9e-103 379.8 218 82.6
A10p26300 Brassica napus HOM05D007177 ORTHO05D008984 3.2e-103 379.0 308 64.9
BraA10t44687Z Brassica rapa HOM05D007177 ORTHO05D008984 3.2e-103 379.0 308 64.9
Cc08_g08290 Coffea canephora HOM05D007177 ORTHO05D008984 3.2e-103 379.0 250 75.6
MSTRG.11740 Avicennia marina HOM05D007177 ORTHO05D008984 9.3e-103 377.5 288 68.1
Aa31LG3G15740 Aethionema arabicum HOM05D007177 ORTHO05D008984 1.6e-102 376.7 295 67.5
vmacro11111 Vaccinium macrocarpon HOM05D007177 ORTHO05D008984 2.1e-102 376.3 291 66.7
Thhalv10014231m.g Eutrema salsugineum HOM05D007177 ORTHO05D008984 6.0e-102 374.8 297 64.3
AUR62032383 Chenopodium quinoa HOM05D007177 ORTHO05D008984 7.9e-102 374.4 283 67.5
arahy.Tifrunner.gnm1.ann1.JYH77Y Arachis hypogaea HOM05D007177 ORTHO05D008984 1.7e-101 373.2 249 74.3
BcaB08g37058 Brassica carinata HOM05D007177 ORTHO05D008984 5.1e-101 371.7 308 62.7
BcaC04g19225 Brassica carinata HOM05D007177 ORTHO05D008984 1.5e-100 370.2 297 65.0
C09p65410 Brassica napus HOM05D007177 ORTHO05D008984 1.5e-100 370.2 297 65.0
BolC9t59366H Brassica oleracea HOM05D007177 ORTHO05D008984 1.5e-100 370.2 297 65.0
Rhsim02G0187100 Rhododendron simsii HOM05D007177 ORTHO05D008984 1.5e-100 370.2 295 65.1
unitig_748.g7498 Utricularia gibba HOM05D007177 ORTHO05D008984 1.5e-100 370.2 248 73.8
SalBow4G1425 Salvia bowleyana HOM05D007177 ORTHO05D008984 2.5e-100 369.4 290 64.8
Peaxi162Scf00105g01429 Petunia axillaris HOM05D007177 ORTHO05D008984 3.3e-100 369.0 237 76.8
CARHR201780 Cardamine hirsuta HOM05D007177 ORTHO05D008984 3.6e-99 365.5 302 64.2
Sp6g32150 Schrenkiella parvula HOM05D007177 ORTHO05D008984 1.1e-98 364.0 266 67.3
AL6G22110 Arabidopsis lyrata HOM05D007177 ORTHO05D008984 1.2e-97 360.5 288 64.6
Lj1g0018262 Lotus japonicus HOM05D007177 ORTHO05D008984 1.2e-97 360.5 301 64.5
AT5G11450 Arabidopsis thaliana HOM05D007177 ORTHO05D008984 2.6e-97 359.4 299 62.9
Phvul.009G098000 Phaseolus vulgaris HOM05D007177 ORTHO05D008984 2.6e-97 359.4 278 65.1
Carub.0006s0990 Capsella rubella HOM05D007177 ORTHO05D008984 3.4e-97 359.0 300 63.7
Glyma.06G073600 Glycine max HOM05D007177 ORTHO05D008984 7.6e-97 357.8 278 64.4
VMungo1309G2383 Vigna mungo HOM05D007177 ORTHO05D008984 8.4e-96 354.4 282 62.8
AUR62024834 Chenopodium quinoa HOM05D007177 ORTHO05D008984 2.4e-95 352.8 300 61.3
TPR.G34677 Trifolium pratense HOM05D007177 ORTHO05D008984 7.1e-95 351.3 238 72.3
Zm00001eb159760 Zea mays HOM05D007177 ORTHO05D008984 9.3e-95 350.9 241 72.2
CDE01G0003 Ceratophyllum demersum HOM05D007177 ORTHO05D008984 5.1e-93 345.1 239 70.7
Medtr3g108040 Medicago truncatula HOM05D007177 ORTHO05D008984 6.7e-93 344.7 234 73.1
Zm00001eb358300 Zea mays HOM05D007177 ORTHO05D008984 1.1e-92 344.0 241 71.4
Actinidia13290 Actinidia chinensis HOM05D007177 ORTHO05D008984 1.5e-92 343.6 231 74.0
Os01g0617900 Oryza sativa ssp. japonica HOM05D007177 ORTHO05D008984 1.5e-92 343.6 241 71.4
HPP92_021881 Vanilla planifolia HOM05D007177 ORTHO05D008984 1.5e-92 343.6 257 67.3
ClCG08G012880 Citrullus lanatus HOM05D007177 ORTHO05D008984 2.5e-92 342.8 360 56.1
PSO782G2748 Papaver somniferum HOM05D007177 ORTHO05D008984 3.7e-91 339.0 261 66.3
PSO063G2030 Papaver somniferum HOM05D007177 ORTHO05D008984 8.1e-91 337.8 261 65.9
FAN24G2430 Fragaria x ananassa HOM05D007177 ORTHO05D008984 1.8e-90 336.7 263 69.6
Psat5g027720 Pisum sativum HOM05D007177 ORTHO05D008984 9.0e-90 334.3 211 73.9
arahy.Tifrunner.gnm1.ann1.22L7FB Arachis hypogaea HOM05D007177 ORTHO05D008984 1.5e-89 333.6 249 67.9
COL.COLO4_24067 Corchorus olitorius HOM05D007177 ORTHO05D008984 2.5e-87 326.2 246 69.5
Prupe.1G466600 Prunus persica HOM05D007177 ORTHO05D008984 3.5e-86 322.4 244 70.1
Glyma.04G072300 Glycine max HOM05D007177 ORTHO05D008984 8.2e-83 311.2 255 62.7
PGR102G2243 Punica granatum HOM05D007177 ORTHO05D008984 2.0e-81 306.6 242 65.3
FAN20G1087 Fragaria x ananassa HOM05D007177 ORTHO05D008984 1.0e-80 304.3 261 65.1
FAN15G3007 Fragaria x ananassa HOM05D007177 ORTHO05D008984 3.8e-80 302.4 262 64.9
Aqoxy7G01836 Aquilegia oxysepala HOM05D007177 ORTHO05D008984 5.5e-79 298.5 213 70.0
Haze_21624 Corylus avellana HOM05D007177 ORTHO05D008984 4.6e-78 295.4 232 66.4
EL10Ac2g02536 Beta vulgaris HOM05D007177 ORTHO05D008984 9.7e-76 287.7 300 52.7
SGA_v2.0_scaffold27G11496 Striga asiatica HOM05D007177 ORTHO05D008984 4.1e-74 282.3 265 60.8
ATR0037G062 Amborella trichopoda HOM05D007177 ORTHO05D008984 5.3e-74 282.0 183 72.7
Cfa013211 Carpinus fangiana HOM05D007177 ORTHO05D008984 7.7e-73 278.1 158 86.7
Ca_15697_v3 Cicer arietinum L. HOM05D007177 ORTHO05D008984 1.7e-72 276.9 203 68.0
Pp3c27_2770 Physcomitrium patens HOM05D007177 ORTHO05D008984 1.2e-70 270.8 239 57.7
Mapoly0103s0019 Marchantia polymorpha HOM05D007177 ORTHO05D008984 1.6e-70 270.4 261 54.4
AUR62011224 Chenopodium quinoa HOM05D007177 ORTHO05D008984 1.3e-67 260.8 279 53.0
Sc23g0007000 Simmondsia chinensis HOM05D007177 ORTHO05D008984 1.3e-56 224.2 176 64.8
Gohir.D06G048101 Gossypium hirsutum HOM05D007177 ORTHO05D008984 1.3e-43 181.0 101 80.2
SEGI_07055 Sequoiadendron giganteum HOM05D007177 ORTHO05D008984 6.3e-43 178.7 130 66.2
Cre07.g328200 Chlamydomonas reinhardtii HOM05D007177 ORTHO05D008984 1.6e-38 164.1 297 34.3
Hma1.2p1_0175F.1_g077230 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 2.2e-35 153.7 107 70.1
MCO07G393 Micromonas commoda HOM05D007177 ORTHO05D008984 1.8e-26 124.0 195 36.9
Actinidia13424 Actinidia chinensis HOM05D007177 ORTHO05D008984 3.4e-12 76.6 49 81.6
AagrBONN_evm.TU.Sc2ySwM_117.3794 Anthoceros agrestis HOM05D007177 ORTHO05D008984 6.4e-11 72.4 101 40.6
Lj1g0025916 Lotus japonicus HOM05D002933 ORTHO05D007742 2.3e-08 63.9 237 23.2
Glyma.18G286500 Glycine max HOM05D002933 ORTHO05D007742 1.1e-07 61.6 236 22.9
PGR142G2901 Punica granatum HOM05D002933 ORTHO05D007742 1.5e-07 61.2 232 24.1


User provided reference genes

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