Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G2575 Cannabis sativa HOM05D006924 ORTHO05D008218 1.2e-165 586.6 337 100.0
Cfa013171 Carpinus fangiana HOM05D006924 ORTHO05D008218 6.4e-71 271.9 327 56.9
QL02p022351 Quercus lobata HOM05D006924 ORTHO05D008218 6.4e-71 271.9 353 54.7
FAN24G1985 Fragaria x ananassa HOM05D006924 ORTHO05D008218 1.6e-69 267.3 359 52.6
GSVIVG01035827001 Vitis vinifera HOM05D006924 ORTHO05D008218 6.0e-69 265.4 357 53.2
FvH4_2g29450 Fragaria vesca HOM05D006924 ORTHO05D008218 7.9e-69 265.0 361 54.8
MD08G1147000 Malus domestica HOM05D006924 ORTHO05D008218 1.3e-68 264.2 362 51.7
FAN27G0236 Fragaria x ananassa HOM05D006924 ORTHO05D008218 2.5e-67 260.0 360 53.9
CSS0024674 Camellia sinensis var. sinensis HOM05D006924 ORTHO05D008218 3.3e-67 259.6 313 52.4
FAN20G0173 Fragaria x ananassa HOM05D006924 ORTHO05D008218 2.8e-66 256.5 362 53.9
TWI63G1089 Tripterygium wilfordii HOM05D006924 ORTHO05D008218 4.0e-65 252.7 328 54.0
MELO3C003685.2 Cucumis melo HOM05D006924 ORTHO05D008218 1.5e-64 250.8 315 56.5
TWI34G0486 Tripterygium wilfordii HOM05D006924 ORTHO05D008218 2.6e-64 250.0 265 57.7
Potri.006G251700 Populus trichocarpa HOM05D006924 ORTHO05D008218 4.5e-64 249.2 345 50.4
Sabra06G0196700 Salix brachista HOM05D006924 ORTHO05D008218 4.5e-64 249.2 342 50.0
RcHm_v2.0_Chr6g0298241 Rosa chinensis HOM05D006924 ORTHO05D008218 5.8e-64 248.8 366 51.9
ClCG05G017060 Citrullus lanatus HOM05D006924 ORTHO05D008218 2.2e-63 246.9 315 56.5
CsaV3_3G046540 Cucumis sativus L. HOM05D006924 ORTHO05D008218 1.9e-62 243.8 317 56.2
THA.LOC104815037 Tarenaya hassleriana HOM05D006924 ORTHO05D008218 9.3e-62 241.5 306 52.6
Gorai.004G274200 Gossypium raimondii HOM05D006924 ORTHO05D008218 2.1e-61 240.4 272 57.0
Thecc.09G150000 Theobroma cacao HOM05D006924 ORTHO05D008218 2.1e-61 240.4 305 51.5
COL.COLO4_00196 Corchorus olitorius HOM05D006924 ORTHO05D008218 6.0e-61 238.8 272 62.1
Gohir.D08G257200 Gossypium hirsutum HOM05D006924 ORTHO05D008218 6.0e-61 238.8 272 57.7
Duzib187G1593 Durio zibethinus HOM05D006924 ORTHO05D008218 7.9e-61 238.4 303 53.5
CDE04G2397 Ceratophyllum demersum HOM05D006924 ORTHO05D008218 3.9e-60 236.1 294 50.0
Migut.E01789 Erythranthe guttata HOM05D006924 ORTHO05D008218 6.7e-60 235.3 317 53.9
Aqoxy7G02106 Aquilegia oxysepala HOM05D006924 ORTHO05D008218 8.7e-60 235.0 315 55.9
Glyma.04G068000 Glycine max HOM05D006924 ORTHO05D008218 8.7e-60 235.0 302 49.0
CARHR201990 Cardamine hirsuta HOM05D006924 ORTHO05D008218 3.3e-59 233.0 302 54.6
Hund25749 Selenicereus undatus HOM05D006924 ORTHO05D008218 4.3e-59 232.6 363 49.6
PSO455G0271 Papaver somniferum HOM05D006924 ORTHO05D008218 1.3e-58 231.1 340 52.4
Actinidia13248 Actinidia chinensis HOM05D006924 ORTHO05D008218 2.8e-58 229.9 281 54.8
Sed0001141 Sechium edule HOM05D006924 ORTHO05D008218 3.7e-58 229.6 336 52.4
Gohir.A08G236600 Gossypium hirsutum HOM05D006924 ORTHO05D008218 4.8e-58 229.2 267 59.6
SGA_v2.0_scaffold163G37992 Striga asiatica HOM05D004464 ORTHO05D005135 8.1e-58 228.4 269 58.7
Ah.12g064050 Amaranthus hybridus HOM05D006924 ORTHO05D008218 2.4e-57 226.9 326 50.6
Cc08_g00950 Coffea canephora HOM05D006924 ORTHO05D008218 2.4e-57 226.9 273 52.7
Aa31LG3G15920 Aethionema arabicum HOM05D006924 ORTHO05D008218 4.0e-57 226.1 303 53.1
MSTRG.1715 Avicennia marina HOM05D006924 ORTHO05D008218 4.0e-57 226.1 305 54.1
Lsat_1_v5_gn_5_30481 Lactuca sativa HOM05D006924 ORTHO05D008218 5.3e-57 225.7 360 48.9
vmacro11153 Vaccinium macrocarpon HOM05D006924 ORTHO05D008218 6.9e-57 225.3 314 54.1
VMungo1309G0550 Vigna mungo HOM05D006924 ORTHO05D008218 9.0e-57 224.9 268 54.1
Dinv15967 Davidia involucrata HOM05D006924 ORTHO05D008218 3.4e-56 223.0 344 51.5
Dinv18229 Davidia involucrata HOM05D006924 ORTHO05D008218 3.4e-56 223.0 344 51.5
Nn8g39393 Nelumbo nucifera HOM05D006924 ORTHO05D008218 3.4e-56 223.0 264 60.6
Eucgr.C02804 Eucalyptus grandis HOM05D006924 ORTHO05D008218 4.5e-56 222.6 330 45.8
Lalb_Chr23g0268731 Lupinus albus HOM05D006924 ORTHO05D008218 5.8e-56 222.2 314 47.1
PSO455G0276 Papaver somniferum HOM05D006924 ORTHO05D008218 5.8e-56 222.2 302 55.0
PSO170G6279 Papaver somniferum HOM05D006924 ORTHO05D008218 7.6e-56 221.9 306 53.9
FAN15G1620 Fragaria x ananassa HOM05D006924 ORTHO05D008218 2.9e-55 219.9 256 58.6
Psat5g028520 Pisum sativum HOM05D006924 ORTHO05D008218 1.4e-54 217.6 321 46.4
Manes.03G016800 Manihot esculenta HOM05D006924 ORTHO05D008218 1.9e-54 217.2 269 56.5
DCAR_001517 Daucus carota HOM05D006924 ORTHO05D008218 2.5e-54 216.9 303 52.1
ECA246G2052 Erigeron canadensis HOM05D000004 ORTHO05D000048 2.5e-54 216.9 372 47.0
Glyma.06G069700 Glycine max HOM05D006924 ORTHO05D008218 2.5e-54 216.9 277 50.9
Ciclev10010768m.g Citrus clementina HOM05D006924 ORTHO05D008218 4.2e-54 216.1 268 57.5
AL6G21900 Arabidopsis lyrata HOM05D006924 ORTHO05D008218 7.1e-54 215.3 355 49.9
Phvul.009G094300 Phaseolus vulgaris HOM05D006924 ORTHO05D008218 9.3e-54 214.9 272 54.4
Prupe.1G478200 Prunus persica HOM05D006924 ORTHO05D008218 1.2e-53 214.5 378 46.8
BraA10t44702Z Brassica rapa HOM05D006924 ORTHO05D008218 1.6e-53 214.2 261 57.9
Lj1g0004722 Lotus japonicus HOM05D006924 ORTHO05D008218 1.6e-53 214.2 268 49.3
Cpa.g.sc115.10 Carica papaya HOM05D006924 ORTHO05D008218 2.1e-53 213.8 257 49.0
MBI04_g07630_MAGBIO Magnolia biondii HOM05D006924 ORTHO05D008218 2.7e-53 213.4 264 53.4
unitig_26.g9317 Utricularia gibba HOM05D006924 ORTHO05D008218 7.9e-53 211.8 270 50.0
A10p26450 Brassica napus HOM05D006924 ORTHO05D008218 1.3e-52 211.1 254 58.3
Carub.0006s0974 Capsella rubella HOM05D006924 ORTHO05D008218 3.0e-52 209.9 308 51.6
BcaB08g37076 Brassica carinata HOM05D006924 ORTHO05D008218 1.1e-51 208.0 358 47.5
Ca_15720_v3 Cicer arietinum L. HOM05D006924 ORTHO05D008218 1.1e-51 208.0 302 45.4
Sp6g32290 Schrenkiella parvula HOM05D006924 ORTHO05D008218 1.1e-51 208.0 337 48.1
Nitab4.5_0009676g0020 Nicotiana tabacum HOM05D006924 ORTHO05D008218 1.9e-51 207.2 256 49.6
Rhsim02G0195700 Rhododendron simsii HOM05D006924 ORTHO05D008218 2.5e-51 206.8 312 48.1
AT5G11270 Arabidopsis thaliana HOM05D006924 ORTHO05D008218 3.3e-51 206.5 356 48.0
CAN.G6.23 Capsicum annuum HOM05D006924 ORTHO05D008218 3.3e-51 206.5 262 50.4
Nitab4.5_0002007g0080 Nicotiana tabacum HOM05D006924 ORTHO05D008218 3.3e-51 206.5 266 52.6
ATR0564G047 Amborella trichopoda HOM05D006924 ORTHO05D008218 2.1e-50 203.8 293 46.8
HanXRQChr08g0234821 Helianthus annuus HOM05D006924 ORTHO05D008218 2.8e-50 203.4 312 48.7
Sc09g0008380 Simmondsia chinensis HOM05D006924 ORTHO05D008218 4.8e-50 202.6 283 50.2
EL10Ac2g02609 Beta vulgaris HOM05D006924 ORTHO05D008218 6.3e-50 202.2 290 45.5
Rhsim02G0198800 Rhododendron simsii HOM05D006924 ORTHO05D008218 1.8e-49 200.7 316 46.8
BcaC04g19245 Brassica carinata HOM05D006924 ORTHO05D008218 3.1e-49 199.9 358 45.3
Peaxi162Scf00073g01120 Petunia axillaris HOM05D006924 ORTHO05D008218 4.1e-49 199.5 261 53.3
Thhalv10013990m.g Eutrema salsugineum HOM05D006924 ORTHO05D008218 5.3e-49 199.1 250 54.0
BolC9t59383H Brassica oleracea HOM05D006924 ORTHO05D008218 6.9e-49 198.7 352 46.3
arahy.Tifrunner.gnm1.ann1.SMV5T8 Arachis hypogaea HOM05D006924 ORTHO05D008218 1.5e-48 197.6 307 50.2
AUR62024897 Chenopodium quinoa HOM05D006924 ORTHO05D008218 1.5e-48 197.6 273 47.3
Medtr3g107530 Medicago truncatula HOM05D006924 ORTHO05D008218 2.0e-48 197.2 255 47.8
Solyc08g061140.3 Solanum lycopersicum HOM05D006924 ORTHO05D008218 2.6e-48 196.8 277 47.7
Sopen08g016210 Solanum pennellii HOM05D006924 ORTHO05D008218 2.6e-48 196.8 275 47.6
arahy.Tifrunner.gnm1.ann1.748QI4 Arachis hypogaea HOM05D006924 ORTHO05D008218 2.9e-47 193.4 344 45.1
PGSC0003DMG400020785 Solanum tuberosum HOM05D006924 ORTHO05D008218 3.8e-47 193.0 258 54.7
Zm00001eb385620 Zea mays HOM05D006924 ORTHO05D008218 7.2e-46 188.7 244 46.3
TPR.G31774 Trifolium pratense HOM05D006924 ORTHO05D008218 1.3e-44 184.5 229 49.8
CiPaw.08G012700 Carya illinoinensis HOM05D006924 ORTHO05D008218 3.9e-44 183.0 301 44.5
Os06g0601000 Oryza sativa ssp. japonica HOM05D006924 ORTHO05D008218 1.9e-43 180.6 299 42.5
Haze_21546 Corylus avellana HOM05D006924 ORTHO05D008218 4.3e-43 179.5 299 50.5
Atru.chr7.2389 Acer truncatum HOM05D006924 ORTHO05D008218 1.4e-41 174.5 326 40.8
HPP92_003651 Vanilla planifolia HOM05D000347 ORTHO05D001997 3.1e-41 173.3 161 62.1
SalBow1G5089 Salvia bowleyana HOM05D006924 ORTHO05D008218 7.7e-40 168.7 153 62.1
TAR626G1567 Trochodendron aralioides HOM05D006924 ORTHO05D008218 4.2e-38 162.9 148 60.8
PGR044G1352 Punica granatum HOM05D006924 ORTHO05D008218 1.2e-37 161.4 278 47.5
Lj7C719T2 Lonicera japonica HOM05D006924 ORTHO05D008218 1.4e-33 147.9 233 51.5
CSS0004992 Camellia sinensis var. sinensis HOM05D006924 ORTHO05D008218 1.1e-27 128.3 123 56.9
Mapoly0029s0145 Marchantia polymorpha HOM05D006924 ORTHO05D008218 2.4e-25 120.6 266 38.3
Pp3c19_15790 Physcomitrium patens HOM05D006924 ORTHO05D008218 9.1e-25 118.6 278 39.6
AUR62030642 Chenopodium quinoa HOM05D006924 ORTHO05D008218 1.2e-24 118.2 271 34.7
Atru.chr7.2280 Acer truncatum HOM05D006924 ORTHO05D008218 6.3e-18 95.9 113 46.9
SEGI_32810 Sequoiadendron giganteum HOM05D006924 ORTHO05D008218 2.0e-16 90.9 245 33.9
Haze_21544 Corylus avellana HOM05D006924 ORTHO05D008218 1.1e-14 85.1 55 70.9
Atru.chr10.503 Acer truncatum HOM05D006924 ORTHO05D008218 2.5e-14 84.0 307 31.6
TPR.G28713 Trifolium pratense HOM05D006924 ORTHO05D008218 6.1e-13 79.3 45 75.6
Nn2g11969 Nelumbo nucifera HOM05D006924 ORTHO05D008218 2.4e-09 67.4 172 35.5
AagrBONN_evm.TU.Sc2ySwM_368.1808 Anthoceros agrestis HOM05D006924 ORTHO05D008218 1.3e-07 61.6 138 34.8
SMO367G1066 Selaginella moellendorffii HOM05D024584 ORTHO05D008218 2.9e-07 60.5 51 49.0
Hma1.2p1_0000F.1_g000370 Hydrangea macrophylla HOM05D006924 ORTHO05D008218 2.5e-06 57.4 138 39.9
Atru.chr1.1063 Acer truncatum HOM05D006924 ORTHO05D008218 7.2e-06 55.8 84 42.9


User provided reference genes

Program Settings