Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G1304 Cannabis sativa HOM05D007638 ORTHO05D009805 2.4e-259 898.3 446 100.0
Thecc.03G253300 Theobroma cacao HOM05D007638 ORTHO05D009805 5.7e-160 568.2 450 61.8
Atru.chr9.1327 Acer truncatum HOM05D007638 ORTHO05D009805 1.3e-159 567.0 449 60.8
QL12p012553 Quercus lobata HOM05D007638 ORTHO05D009805 1.7e-159 566.6 445 64.0
Cfa012740 Carpinus fangiana HOM05D007638 ORTHO05D009805 2.7e-157 559.3 454 62.6
Prupe.5G071400 Prunus persica HOM05D007638 ORTHO05D009805 4.5e-157 558.5 453 61.6
Potri.003G110600 Populus trichocarpa HOM05D007638 ORTHO05D009805 2.3e-156 556.2 454 61.2
Manes.02G038700 Manihot esculenta HOM05D007638 ORTHO05D009805 1.5e-155 553.5 446 60.3
Gohir.D09G190600 Gossypium hirsutum HOM05D007638 ORTHO05D009805 1.9e-155 553.1 450 61.1
GSVIVG01001312001 Vitis vinifera HOM05D007638 ORTHO05D009805 1.2e-154 550.4 460 60.2
Gorai.006G213300 Gossypium raimondii HOM05D007638 ORTHO05D009805 1.6e-154 550.1 450 61.1
TWI15G0131 Tripterygium wilfordii HOM05D007638 ORTHO05D009805 5.2e-153 545.0 446 59.2
Dinv39130 Davidia involucrata HOM05D007638 ORTHO05D009805 1.2e-152 543.9 473 59.2
MD06G1060400 Malus domestica HOM05D007638 ORTHO05D009805 1.2e-152 543.9 458 60.5
Gohir.A09G196000 Gossypium hirsutum HOM05D007638 ORTHO05D009805 3.4e-152 542.3 450 60.2
FvH4_5g18700 Fragaria vesca HOM05D007638 ORTHO05D009805 9.8e-152 540.8 451 60.1
RcHm_v2.0_Chr7g0202991 Rosa chinensis HOM05D007638 ORTHO05D009805 1.2e-149 533.9 455 59.8
CiPaw.12G109000 Carya illinoinensis HOM05D007638 ORTHO05D009805 2.0e-149 533.1 450 60.4
Lj4g0022413 Lotus japonicus HOM05D007638 ORTHO05D009805 2.0e-149 533.1 450 59.3
Sabra03G0076700 Salix brachista HOM05D007638 ORTHO05D009805 6.0e-149 531.6 462 58.4
TAR636G1390 Trochodendron aralioides HOM05D007638 ORTHO05D009805 2.3e-148 529.6 461 59.2
Sed0016401 Sechium edule HOM05D007638 ORTHO05D009805 5.0e-148 528.5 448 59.8
Sc07g0009320 Simmondsia chinensis HOM05D007638 ORTHO05D009805 1.1e-147 527.3 454 58.4
Hma1.2p1_2238F.1_g317800 Hydrangea macrophylla HOM05D007638 ORTHO05D009805 3.3e-147 525.8 454 60.1
Ca_21958_v3 Cicer arietinum L. HOM05D007638 ORTHO05D009805 1.2e-146 523.9 456 59.9
Nn1g01039 Nelumbo nucifera HOM05D007638 ORTHO05D009805 6.8e-145 518.1 467 57.0
Ciclev10020230m.g Citrus clementina HOM05D007638 ORTHO05D009805 2.4e-142 509.6 460 56.7
Lalb_Chr16g0389341 Lupinus albus HOM05D007638 ORTHO05D009805 2.1e-141 506.5 452 57.1
CsaV3_5G004170 Cucumis sativus L. HOM05D007638 ORTHO05D009805 2.7e-141 506.1 448 57.4
HanXRQChr17g0549771 Helianthus annuus HOM05D007638 ORTHO05D009805 1.3e-140 503.8 461 56.4
Cc08_g12610 Coffea canephora HOM05D007638 ORTHO05D009805 1.6e-138 496.9 478 55.6
Glyma.05G058500 Glycine max HOM05D007638 ORTHO05D009805 6.2e-138 495.0 462 55.6
Oeu017018.1 Olea europaea HOM05D007638 ORTHO05D009805 1.1e-137 494.2 467 54.4
Rhsim09G0039100 Rhododendron simsii HOM05D007638 ORTHO05D009805 5.2e-137 491.9 551 49.7
TPR.G37700 Trifolium pratense HOM05D007638 ORTHO05D009805 4.4e-136 488.8 451 58.8
Solyc08g078750.4 Solanum lycopersicum HOM05D007638 ORTHO05D009805 5.8e-136 488.4 467 54.4
Sopen08g027220 Solanum pennellii HOM05D007638 ORTHO05D009805 9.9e-136 487.6 466 53.6
arahy.Tifrunner.gnm1.ann1.UY0NCU Arachis hypogaea HOM05D007638 ORTHO05D009805 1.7e-135 486.9 455 56.5
Hund14529 Selenicereus undatus HOM05D007638 ORTHO05D009805 1.7e-135 486.9 461 55.5
CAN.G1218.20 Capsicum annuum HOM05D007638 ORTHO05D009805 3.2e-134 482.6 466 53.4
Migut.A00967 Erythranthe guttata HOM05D007638 ORTHO05D009805 4.1e-134 482.3 475 54.1
THA.LOC104812781 Tarenaya hassleriana HOM05D007638 ORTHO05D009805 7.1e-134 481.5 474 52.1
Ah.02g116770 Amaranthus hybridus HOM05D007638 ORTHO05D009805 3.9e-132 475.7 465 52.9
FAN13G2113 Fragaria x ananassa HOM05D007638 ORTHO05D009805 5.1e-132 475.3 419 58.0
EL10Ac5g13054 Beta vulgaris HOM05D007638 ORTHO05D009805 1.5e-131 473.8 465 53.3
Lsat_1_v5_gn_3_541 Lactuca sativa HOM05D007638 ORTHO05D009805 1.7e-127 460.3 461 53.6
AUR62007504 Chenopodium quinoa HOM05D007638 ORTHO05D009805 5.1e-124 448.7 463 52.9
Psat4g071600 Pisum sativum HOM05D007638 ORTHO05D009805 1.9e-123 446.8 401 59.6
MSTRG.25529 Avicennia marina HOM05D007638 ORTHO05D009805 2.4e-121 439.9 380 56.1
arahy.Tifrunner.gnm1.ann1.E4IRCP Arachis hypogaea HOM05D007638 ORTHO05D009805 3.1e-121 439.5 420 55.0
PSO781G0038 Papaver somniferum HOM05D007638 ORTHO05D009805 5.3e-121 438.7 460 50.9
Hma1.2p1_3173F.1_g333580 Hydrangea macrophylla HOM05D007638 ORTHO05D009805 5.8e-120 435.3 469 51.4
Eucgr.D02067 Eucalyptus grandis HOM05D007638 ORTHO05D009805 5.4e-118 428.7 369 57.7
PGR031G3001 Punica granatum HOM05D007638 ORTHO05D009805 2.7e-117 426.4 457 52.5
FAN08G1927 Fragaria x ananassa HOM05D007638 ORTHO05D009805 3.0e-116 422.9 451 51.0
Peaxi162Scf00002g00171 Petunia axillaris HOM05D007638 ORTHO05D009805 3.0e-116 422.9 458 49.6
SGA_v2.0_scaffold120G32873 Striga asiatica HOM05D007638 ORTHO05D009805 8.7e-116 421.4 535 45.8
Aa31LG2G12650 Aethionema arabicum HOM05D007638 ORTHO05D009805 5.6e-115 418.7 448 49.6
ATR1153G083 Amborella trichopoda HOM05D007638 ORTHO05D009805 1.6e-114 417.2 449 49.0
PSO541G0423 Papaver somniferum HOM05D007638 ORTHO05D009805 6.4e-111 405.2 442 49.1
FAN18G0664 Fragaria x ananassa HOM05D007638 ORTHO05D009805 4.6e-109 399.1 299 64.2
Nitab4.5_0008481g0020 Nicotiana tabacum HOM05D007638 ORTHO05D009805 1.1e-105 387.9 460 48.5
Sp7g15100 Schrenkiella parvula HOM05D007638 ORTHO05D009805 1.2e-104 384.4 421 48.2
AUR62039957 Chenopodium quinoa HOM05D007638 ORTHO05D009805 4.5e-104 382.5 461 45.8
CDE11G1220 Ceratophyllum demersum HOM05D007638 ORTHO05D009805 1.1e-102 377.9 462 47.0
ClCG01G003990 Citrullus lanatus HOM05D007638 ORTHO05D009805 2.5e-102 376.7 471 46.3
Aqoxy7G00749 Aquilegia oxysepala HOM05D007638 ORTHO05D009805 2.5e-99 366.7 413 47.9
vmacro00554 Vaccinium macrocarpon HOM05D007638 ORTHO05D009805 5.3e-97 359.0 535 43.4
DCAR_008488 Daucus carota HOM05D007638 ORTHO05D009805 2.9e-95 353.2 312 55.4
SEGI_06661 Sequoiadendron giganteum HOM05D007638 ORTHO05D009805 5.1e-92 342.4 496 40.5
Duzib084G1003 Durio zibethinus HOM05D007638 ORTHO05D009805 1.3e-87 327.8 335 51.9
Nitab4.5_0000312g0180 Nicotiana tabacum HOM05D007638 ORTHO05D009805 3.8e-87 326.2 332 52.7
Pp3c9_14850 Physcomitrium patens HOM05D007638 ORTHO05D009805 6.1e-85 318.9 492 37.4
PGSC0003DMG400004754 Solanum tuberosum HOM05D007638 ORTHO05D009805 3.2e-78 296.6 346 47.4
Cpa.g.sc29.142 Carica papaya HOM05D007638 ORTHO05D009805 4.4e-75 286.2 295 53.9
CBR_g20284 Chara braunii HOM05D007638 ORTHO05D009805 6.1e-69 265.8 376 37.2
AagrBONN_evm.TU.Sc2ySwM_228.4592 Anthoceros agrestis HOM05D007638 ORTHO05D009805 7.0e-65 252.3 473 35.9
DCAR_008487 Daucus carota HOM05D007638 ORTHO05D009805 6.5e-63 245.7 341 44.3
Eucgr.D02064 Eucalyptus grandis HOM05D007638 ORTHO05D009805 4.0e-60 236.5 326 43.6
Actinidia02124 Actinidia chinensis HOM05D007638 ORTHO05D009805 8.3e-58 228.8 369 43.6
MELO3C033998.2 Cucumis melo HOM05D007638 ORTHO05D009805 1.1e-57 228.4 329 44.4
FAN04G2384 Fragaria x ananassa HOM05D007638 ORTHO05D009805 2.7e-53 213.8 202 53.0
CSS0011551 Camellia sinensis var. sinensis HOM05D007638 ORTHO05D009805 3.2e-41 173.7 95 76.8
Haze_07891 Corylus avellana HOM05D007638 ORTHO05D009805 1.0e-39 168.7 248 44.4
CSS0041058 Camellia sinensis var. sinensis HOM05D007638 ORTHO05D009805 3.7e-18 97.1 126 47.6
Eucgr.L01520 Eucalyptus grandis HOM05D007638 ORTHO05D009805 5.1e-15 86.7 126 43.7
TWI32G0219 Tripterygium wilfordii HOM05D000032 ORTHO05D009383 6.2e-13 79.7 48 75.0
FvH4_6g35850 Fragaria vesca HOM05D000032 ORTHO05D009383 8.1e-13 79.3 80 51.2
FAN14G3162 Fragaria x ananassa HOM05D000032 ORTHO05D009383 8.1e-13 79.3 80 51.2
FAN14G3671 Fragaria x ananassa HOM05D000032 ORTHO05D009383 8.1e-13 79.3 80 51.2
Haze_07890 Corylus avellana HOM05D007638 ORTHO05D009805 1.1e-12 79.0 37 89.2
FAN02G2103 Fragaria x ananassa HOM05D000032 ORTHO05D009383 1.4e-12 78.6 70 52.9
FAN05G0348 Fragaria x ananassa HOM05D000032 ORTHO05D009383 1.4e-12 78.6 70 52.9
RcHm_v2.0_Chr2g0147891 Rosa chinensis HOM05D000032 ORTHO05D009383 2.4e-12 77.8 48 70.8
CARHR074860 Cardamine hirsuta HOM05D000032 ORTHO05D009383 8.9e-12 75.9 49 67.3
DCAR_008449 Daucus carota HOM05D000032 ORTHO05D009383 8.9e-12 75.9 56 64.3
FAN09G2555 Fragaria x ananassa HOM05D000032 ORTHO05D009383 1.5e-11 75.1 80 50.0
Glyma.02G068300 Glycine max HOM05D000032 ORTHO05D009383 1.5e-11 75.1 48 68.8
Nn3g18407 Nelumbo nucifera HOM05D000032 ORTHO05D009383 2.0e-11 74.7 81 49.4
Atru.chr12.440 Acer truncatum HOM05D000032 ORTHO05D009383 2.6e-11 74.3 48 68.8
Nitab4.5_0003436g0100 Nicotiana tabacum HOM05D000032 ORTHO05D009383 2.6e-11 74.3 57 59.6
arahy.Tifrunner.gnm1.ann1.8UB6M3 Arachis hypogaea HOM05D000032 ORTHO05D009383 5.8e-11 73.2 72 52.8
AUR62016519 Chenopodium quinoa HOM05D000032 ORTHO05D009383 5.8e-11 73.2 57 59.6
Lj1A470G20 Lonicera japonica HOM05D000032 ORTHO05D009383 5.8e-11 73.2 80 48.8
Lj1A478G35 Lonicera japonica HOM05D000032 ORTHO05D009383 5.8e-11 73.2 80 48.8
unitig_0.g181 Utricularia gibba HOM05D000032 ORTHO05D009383 5.8e-11 73.2 95 43.2
GSVIVG01032945001 Vitis vinifera HOM05D007638 ORTHO05D009383 5.8e-11 73.2 57 59.6
AT3G02065 Arabidopsis thaliana HOM05D000032 ORTHO05D009383 7.6e-11 72.8 48 66.7
Cpa.g.sc17.215 Carica papaya HOM05D000032 ORTHO05D009383 7.6e-11 72.8 51 60.8
PSO339G1569 Papaver somniferum HOM05D000032 ORTHO05D009383 7.6e-11 72.8 48 66.7
Prupe.3G315400 Prunus persica HOM05D001005 ORTHO05D000836 7.6e-11 72.8 67 52.2
THA.LOC104823368 Tarenaya hassleriana HOM05D000032 ORTHO05D009383 7.6e-11 72.8 48 62.5
CiPaw.14G093500 Carya illinoinensis HOM05D000032 ORTHO05D009383 9.9e-11 72.4 77 45.5
AUR62001157 Chenopodium quinoa HOM05D000032 ORTHO05D009383 9.9e-11 72.4 67 53.7
Eucgr.K02338 Eucalyptus grandis HOM05D000032 ORTHO05D009383 9.9e-11 72.4 69 50.7
Aa31LG5G11250 Aethionema arabicum HOM05D000032 ORTHO05D009383 1.3e-10 72.0 61 54.1
AL3G10020 Arabidopsis lyrata HOM05D000032 ORTHO05D009383 1.3e-10 72.0 48 66.7
MSTRG.18394 Avicennia marina HOM05D000032 ORTHO05D009383 1.3e-10 72.0 48 66.7
Glyma.16G149800 Glycine max HOM05D000032 ORTHO05D009383 1.3e-10 72.0 71 53.5
MD17G1003800 Malus domestica HOM05D000032 ORTHO05D009383 1.3e-10 72.0 48 64.6
Ah.15g094020 Amaranthus hybridus HOM05D000032 ORTHO05D009383 1.7e-10 71.6 53 60.4
Lsat_1_v5_gn_2_101321 Lactuca sativa HOM05D000032 ORTHO05D009383 1.7e-10 71.6 60 53.3
SGA_v2.0_scaffold8G04635 Striga asiatica HOM05D000032 ORTHO05D009383 1.7e-10 71.6 48 62.5
TPR.G6050 Trifolium pratense HOM05D000032 ORTHO05D009383 1.7e-10 71.6 59 55.9
VMungo0464G1688 Vigna mungo HOM05D000032 ORTHO05D009383 1.7e-10 71.6 74 48.6
CDE07G0397 Ceratophyllum demersum HOM05D000032 ORTHO05D009383 2.2e-10 71.2 48 66.7
Eucgr.L03255 Eucalyptus grandis HOM05D000032 ORTHO05D009383 2.2e-10 71.2 69 49.3
Thhalv10020567m.g Eutrema salsugineum HOM05D000032 ORTHO05D009383 2.2e-10 71.2 48 58.3
Thecc.04G052100 Theobroma cacao HOM05D000032 ORTHO05D009383 2.2e-10 71.2 90 45.6
HanXRQChr14g0453351 Helianthus annuus HOM05D000032 ORTHO05D009383 2.9e-10 70.9 40 67.5
Lalb_Chr03g0043781 Lupinus albus HOM05D000032 ORTHO05D009383 2.9e-10 70.9 50 58.0
Manes.04G096700 Manihot esculenta HOM05D000032 ORTHO05D009383 2.9e-10 70.9 53 56.6
PGR044G2709 Punica granatum HOM05D000032 ORTHO05D009383 2.9e-10 70.9 70 50.0
Sopen01g002340 Solanum pennellii HOM05D000032 ORTHO05D009383 2.9e-10 70.9 57 56.1
Aqoxy7G03583 Aquilegia oxysepala HOM05D000032 ORTHO05D009383 3.8e-10 70.5 46 69.6
ClCG05G012450 Citrullus lanatus HOM05D000032 ORTHO05D009383 3.8e-10 70.5 41 65.9
Gohir.D10G081800 Gossypium hirsutum HOM05D000032 ORTHO05D009383 3.8e-10 70.5 53 60.4
Sabra14G0105500 Salix brachista HOM05D000032 ORTHO05D009383 3.8e-10 70.5 47 57.4
Sp3g00020 Schrenkiella parvula HOM05D000032 ORTHO05D009383 3.8e-10 70.5 48 62.5
Solyc01g006340.3 Solanum lycopersicum HOM05D000032 ORTHO05D009383 3.8e-10 70.5 57 54.4
PGSC0003DMG400032150 Solanum tuberosum HOM05D000032 ORTHO05D009383 3.8e-10 70.5 57 57.9
Zm00001eb235630 Zea mays HOM05D000032 ORTHO05D009383 3.8e-10 70.5 89 43.8
ATR0824G065 Amborella trichopoda HOM05D000032 ORTHO05D009383 4.9e-10 70.1 52 61.5
arahy.Tifrunner.gnm1.ann1.U3NDHF Arachis hypogaea HOM05D000032 ORTHO05D009383 4.9e-10 70.1 51 62.7
EL10Ac7g17945 Beta vulgaris HOM05D000032 ORTHO05D009383 4.9e-10 70.1 61 54.1
CSS0028588 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D009383 4.9e-10 70.1 46 65.2
Carub.0003s0002 Capsella rubella HOM05D000032 ORTHO05D009383 4.9e-10 70.1 48 64.6
CBR_g3873 Chara braunii HOM05D000032 ORTHO05D009383 4.9e-10 70.1 40 70.0
Ca_04506_v3 Cicer arietinum L. HOM05D000032 ORTHO05D009383 4.9e-10 70.1 43 62.8
COL.COLO4_13406 Corchorus olitorius HOM05D000032 ORTHO05D009383 4.9e-10 70.1 43 67.4
CsaV3_3G020080 Cucumis sativus L. HOM05D000032 ORTHO05D009383 4.9e-10 70.1 40 70.0
Duzib187G1127 Durio zibethinus HOM05D000032 ORTHO05D009383 4.9e-10 70.1 59 52.5
PSO384G0785 Papaver somniferum HOM05D000032 ORTHO05D009383 4.9e-10 70.1 48 64.6
Potri.014G140100 Populus trichocarpa HOM05D000032 ORTHO05D009383 4.9e-10 70.1 47 57.4
Rhsim13G0227500 Rhododendron simsii HOM05D006358 ORTHO05D009383 4.9e-10 70.1 46 67.4
CSS0019503 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D009383 6.4e-10 69.7 40 67.5
Migut.D00539 Erythranthe guttata HOM05D000032 ORTHO05D009383 6.4e-10 69.7 40 67.5
Medtr6g033070 Medicago truncatula HOM05D000032 ORTHO05D009383 6.4e-10 69.7 70 47.1
Cc01_g03330 Coffea canephora HOM05D000032 ORTHO05D009383 8.4e-10 69.3 47 66.0
MBI11_g17278_MAGBIO Magnolia biondii HOM05D000032 ORTHO05D009383 8.4e-10 69.3 144 32.6
TAR633G1362 Trochodendron aralioides HOM05D000032 ORTHO05D009383 8.4e-10 69.3 71 50.7
Pp3c8_12050 Physcomitrium patens HOM05D000032 ORTHO05D009383 1.1e-09 68.9 54 57.4
arahy.Tifrunner.gnm1.ann1.BLPY9G Arachis hypogaea HOM05D007638 ORTHO05D009383 1.4e-09 68.6 73 52.1
Cfa010055 Carpinus fangiana HOM05D001005 ORTHO05D000836 1.4e-09 68.6 74 47.3
Ciclev10017882m.g Citrus clementina HOM05D000032 ORTHO05D009383 1.4e-09 68.6 54 59.3
Lj3g0015614 Lotus japonicus HOM05D000032 ORTHO05D009383 1.4e-09 68.6 43 65.1
QL02p068178 Quercus lobata HOM05D000032 ORTHO05D009383 1.4e-09 68.6 71 47.9
Sc14g0008440 Simmondsia chinensis HOM05D000032 ORTHO05D009383 1.4e-09 68.6 71 49.3
AagrBONN_evm.TU.Sc2ySwM_369.192 Anthoceros agrestis HOM05D000032 ORTHO05D009383 2.4e-09 67.8 48 62.5
MELO3C014755.2 Cucumis melo HOM05D000032 ORTHO05D009383 2.4e-09 67.8 70 45.7
Hma1.2p1_0098F.1_g048240 Hydrangea macrophylla HOM05D000032 ORTHO05D009383 2.4e-09 67.8 46 63.0
Peaxi162Scf00192g00012 Petunia axillaris HOM05D000032 ORTHO05D009383 2.4e-09 67.8 57 56.1
Psat1g014560 Pisum sativum HOM05D000032 ORTHO05D009383 2.4e-09 67.8 43 60.5
Gohir.A10G069700 Gossypium hirsutum HOM05D000032 ORTHO05D009383 5.4e-09 66.6 77 45.5
Gorai.011G088700 Gossypium raimondii HOM05D000032 ORTHO05D009383 5.4e-09 66.6 72 43.1
vmacro21760 Vaccinium macrocarpon HOM05D000032 ORTHO05D009383 7.1e-09 66.2 90 43.3
ECA238G2389 Erigeron canadensis HOM05D000032 ORTHO05D009383 1.2e-08 65.5 60 55.0
CAN.G140.9 Capsicum annuum HOM05D000032 ORTHO05D009383 1.6e-08 65.1 55 56.4
SHI50144 Sapria himalayana HOM05D000032 ORTHO05D009383 1.6e-08 65.1 44 59.1
Mapoly0135s0036 Marchantia polymorpha HOM05D000032 ORTHO05D009383 2.7e-08 64.3 94 38.3
SMO201G0222 Selaginella moellendorffii HOM05D000032 ORTHO05D009383 7.8e-08 62.8 52 53.8
Migut.A00966 Erythranthe guttata HOM05D007638 ORTHO05D009805 1.0e-07 62.4 40 72.5
Haze_14989 Corylus avellana HOM05D000032 ORTHO05D009383 1.9e-06 58.2 49 57.1
EL10Ac9g22788 Beta vulgaris HOM05D000032 ORTHO05D009383 7.3e-06 56.2 36 61.1


User provided reference genes

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