Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G1059 Cannabis sativa HOM05D001969 ORTHO05D009003 1.3e-54 216.5 140 100.0
CANSAT78G0375 Cannabis sativa HOM05D001969 ORTHO05D003463 1.3e-49 199.9 137 93.4
RcHm_v2.0_Chr2g0127151 Rosa chinensis HOM05D001969 ORTHO05D009003 8.7e-38 160.6 139 64.0
Lalb_Chr19g0135421 Lupinus albus HOM05D001969 ORTHO05D009003 7.3e-37 157.5 138 78.3
TAR627G0343 Trochodendron aralioides HOM05D001969 ORTHO05D009003 6.9e-35 151.0 138 76.8
TAR627G0582 Trochodendron aralioides HOM05D001969 ORTHO05D009003 6.9e-35 151.0 138 76.8
Sed0009336 Sechium edule HOM05D001969 ORTHO05D009003 9.0e-35 150.6 138 71.7
Atru.chr6.3054 Acer truncatum HOM05D001969 ORTHO05D009003 1.2e-34 150.2 127 78.7
MD09G1092600 Malus domestica HOM05D001969 ORTHO05D009003 1.2e-34 150.2 141 72.3
MD17G1082700 Malus domestica HOM05D001969 ORTHO05D009003 1.2e-34 150.2 140 75.7
Cfa003704 Carpinus fangiana HOM05D001969 ORTHO05D009003 3.4e-34 148.7 133 73.7
Nitab4.5_0006575g0040 Nicotiana tabacum HOM05D001969 ORTHO05D009003 4.5e-34 148.3 138 74.6
QL08p048209 Quercus lobata HOM05D001969 ORTHO05D009003 4.5e-34 148.3 132 72.0
Cc11_g01780 Coffea canephora HOM05D001969 ORTHO05D009003 5.8e-34 147.9 133 74.4
COL.COLO4_13690 Corchorus olitorius HOM05D001969 ORTHO05D009003 5.8e-34 147.9 127 78.7
Thecc.02G172900 Theobroma cacao HOM05D001969 ORTHO05D009003 9.9e-34 147.1 127 78.0
Glyma.09G257600 Glycine max HOM05D001969 ORTHO05D009003 1.7e-33 146.4 138 73.9
Phvul.011G177800 Phaseolus vulgaris HOM05D001969 ORTHO05D009003 1.7e-33 146.4 138 73.9
vmacro09267 Vaccinium macrocarpon HOM05D001969 ORTHO05D009003 1.7e-33 146.4 133 73.7
VMungo1127G0255 Vigna mungo HOM05D001969 ORTHO05D009003 1.7e-33 146.4 138 73.9
Cc11_g01770 Coffea canephora HOM05D001969 ORTHO05D009003 6.4e-33 144.4 133 73.7
MSTRG.23988 Avicennia marina HOM05D001969 ORTHO05D009003 1.1e-32 143.7 137 73.0
ECA233G3782 Erigeron canadensis HOM05D001969 ORTHO05D009003 1.1e-32 143.7 140 65.7
HanXRQChr09g0274351 Helianthus annuus HOM05D001969 ORTHO05D009003 1.1e-32 143.7 138 68.8
HanXRQChr11g0350221 Helianthus annuus HOM05D001969 ORTHO05D009003 1.1e-32 143.7 138 69.6
ECA236G1367 Erigeron canadensis HOM05D001969 ORTHO05D009003 1.4e-32 143.3 140 65.0
Potri.013G145800 Populus trichocarpa HOM05D001969 ORTHO05D009003 1.4e-32 143.3 127 76.4
Glyma.18G235000 Glycine max HOM05D001969 ORTHO05D009003 1.9e-32 142.9 138 72.5
TAR629G1647 Trochodendron aralioides HOM05D001969 ORTHO05D009003 1.9e-32 142.9 130 73.1
MBI04_g38761_MAGBIO Magnolia biondii HOM05D001969 ORTHO05D009003 2.4e-32 142.5 138 69.6
Nn1g06730 Nelumbo nucifera HOM05D001969 ORTHO05D009003 2.4e-32 142.5 138 65.2
CSS0025708 Camellia sinensis var. sinensis HOM05D001969 ORTHO05D009003 4.2e-32 141.7 135 69.6
Gohir.D02G182700 Gossypium hirsutum HOM05D001969 ORTHO05D009003 4.2e-32 141.7 127 76.4
Ciclev10017445m.g Citrus clementina HOM05D001969 ORTHO05D003463 5.4e-32 141.4 127 63.8
Gohir.A03G159600 Gossypium hirsutum HOM05D001969 ORTHO05D009003 5.4e-32 141.4 127 76.4
HanXRQChr06g0167021 Helianthus annuus HOM05D001969 ORTHO05D009003 5.4e-32 141.4 138 68.8
MBI06_g08467_MAGBIO Magnolia biondii HOM05D001969 ORTHO05D009003 5.4e-32 141.4 138 68.8
Nitab4.5_0003069g0040 Nicotiana tabacum HOM05D001969 ORTHO05D009003 5.4e-32 141.4 138 71.7
SGA_v2.0_scaffold3G01553 Striga asiatica HOM05D001969 ORTHO05D009003 9.3e-32 140.6 132 71.2
Actinidia39674 Actinidia chinensis HOM05D001969 ORTHO05D003463 2.7e-31 139.0 136 67.6
Lsat_1_v5_gn_3_137700 Lactuca sativa HOM05D001969 ORTHO05D009003 2.7e-31 139.0 138 58.0
Rhsim04G0021700 Rhododendron simsii HOM05D001969 ORTHO05D009003 3.5e-31 138.7 133 72.9
CiPaw.16G086600 Carya illinoinensis HOM05D001969 ORTHO05D009003 4.6e-31 138.3 138 71.0
SalBow7G2523 Salvia bowleyana HOM05D001969 ORTHO05D009003 4.6e-31 138.3 138 67.4
Sed0013701 Sechium edule HOM05D001969 ORTHO05D009003 4.6e-31 138.3 88 64.8
Solyc07g064840.3 Solanum lycopersicum HOM05D001969 ORTHO05D009003 4.6e-31 138.3 138 69.6
Duzib248G0251 Durio zibethinus HOM05D001969 ORTHO05D009003 6.0e-31 137.9 127 74.0
PGR142G0421 Punica granatum HOM05D001969 ORTHO05D003463 6.0e-31 137.9 123 77.2
SGA_v2.0_scaffold135G34841 Striga asiatica HOM05D001969 ORTHO05D009003 7.9e-31 137.5 129 73.6
Dinv23700 Davidia involucrata HOM05D001969 ORTHO05D009003 1.0e-30 137.1 134 67.9
FAN05G0495 Fragaria x ananassa HOM05D001969 ORTHO05D003463 1.0e-30 137.1 80 75.0
DCAR_011200 Daucus carota HOM05D001969 ORTHO05D009003 1.3e-30 136.7 137 48.2
Nn1g03931 Nelumbo nucifera HOM05D001969 ORTHO05D009003 1.3e-30 136.7 138 69.6
Sopen07g033040 Solanum pennellii HOM05D001969 ORTHO05D009003 1.3e-30 136.7 138 69.6
PGSC0003DMG400022306 Solanum tuberosum HOM05D001969 ORTHO05D009003 1.8e-30 136.3 138 68.8
Actinidia39300 Actinidia chinensis HOM05D001969 ORTHO05D009003 2.3e-30 136.0 138 68.8
SalBow1G0343 Salvia bowleyana HOM05D001969 ORTHO05D009003 3.0e-30 135.6 136 66.9
SalBow7G4035 Salvia bowleyana HOM05D001969 ORTHO05D009003 3.0e-30 135.6 136 66.9
TWI18G1087 Tripterygium wilfordii HOM05D001969 ORTHO05D009003 3.9e-30 135.2 127 62.2
ATR1001G005 Amborella trichopoda HOM05D001969 ORTHO05D009003 6.7e-30 134.4 138 64.5
Haze_15783 Corylus avellana HOM05D001969 ORTHO05D009003 8.7e-30 134.0 122 75.4
Nitab4.5_0002260g0270 Nicotiana tabacum HOM05D001969 ORTHO05D009003 8.7e-30 134.0 138 68.8
Nitab4.5_0003358g0010 Nicotiana tabacum HOM05D001969 ORTHO05D009003 8.7e-30 134.0 138 68.8
Peaxi162Scf00423g00066 Petunia axillaris HOM05D001969 ORTHO05D009003 3.3e-29 132.1 129 71.3
Ca_20693_v3 Cicer arietinum L. HOM05D001969 ORTHO05D009003 4.3e-29 131.7 131 71.0
Ca_30106_v3 Cicer arietinum L. HOM05D001969 ORTHO05D009003 4.3e-29 131.7 131 71.0
AUR62029451 Chenopodium quinoa HOM05D001969 ORTHO05D009003 7.4e-29 131.0 130 65.4
Aqoxy6G02660 Aquilegia oxysepala HOM05D001969 ORTHO05D009003 9.6e-29 130.6 131 68.7
Migut.H00150 Erythranthe guttata HOM05D001969 ORTHO05D009003 1.3e-28 130.2 129 65.9
Lju41E32T0 Lonicera japonica HOM05D001969 ORTHO05D009003 1.6e-28 129.8 88 68.2
Psat7g197120 Pisum sativum HOM05D001969 ORTHO05D009003 2.1e-28 129.4 131 70.2
TPR.G21647 Trifolium pratense HOM05D001969 ORTHO05D009003 2.8e-28 129.0 133 69.9
CDE04G1317 Ceratophyllum demersum HOM05D004539 ORTHO05D009003 3.6e-28 128.6 141 68.8
Oeu047331.1 Olea europaea HOM05D001969 ORTHO05D009003 4.8e-28 128.3 128 69.5
Medtr4g065010 Medicago truncatula HOM05D001969 ORTHO05D009003 6.2e-28 127.9 126 73.0
CAN.G1310.15 Capsicum annuum HOM05D001969 ORTHO05D009003 8.1e-28 127.5 138 65.9
EL10Ac3g05654 Beta vulgaris HOM05D001969 ORTHO05D003463 3.1e-27 125.6 131 65.6
Manes.13G150950 Manihot esculenta HOM05D001969 ORTHO05D009003 3.1e-27 125.6 77 71.4
Gorai.005G205100 Gossypium raimondii HOM05D001969 ORTHO05D003463 4.0e-27 125.2 129 72.1
CAN.G1720.5 Capsicum annuum HOM05D001969 ORTHO05D009003 5.3e-27 124.8 138 65.2
Lj3g0006045 Lotus japonicus HOM05D001969 ORTHO05D009003 6.9e-27 124.4 138 66.7
Eucgr.K00935 Eucalyptus grandis HOM05D001969 ORTHO05D009003 1.2e-26 123.6 126 65.9
Medtr4g046043 Medicago truncatula HOM05D001969 ORTHO05D009003 2.0e-26 122.9 133 64.7
CsaV3_6G012510 Cucumis sativus L. HOM05D001969 ORTHO05D003463 2.6e-26 122.5 115 76.5
Sc03g0002190 Simmondsia chinensis HOM05D001969 ORTHO05D009003 3.4e-26 122.1 138 58.7
GSVIVG01030575001 Vitis vinifera HOM05D001969 ORTHO05D009003 4.5e-26 121.7 115 71.3
unitig_748.g8143 Utricularia gibba HOM05D001969 ORTHO05D009003 5.8e-26 121.3 125 69.6
Lsat_1_v5_gn_2_3941 Lactuca sativa HOM05D001969 ORTHO05D009003 1.7e-25 119.8 123 44.7
Lj2g0006312 Lotus japonicus HOM05D001969 ORTHO05D009003 1.7e-25 119.8 138 66.7
SEGI_26592 Sequoiadendron giganteum HOM05D001969 ORTHO05D009003 8.4e-25 117.5 130 56.2
THA.LOC104811178 Tarenaya hassleriana HOM05D001969 ORTHO05D009003 9.3e-24 114.0 133 40.6
TPR.G31971 Trifolium pratense HOM05D001669 ORTHO05D006496 3.5e-23 112.1 82 61.0
Aa31LG9G15650 Aethionema arabicum HOM05D001969 ORTHO05D009003 1.8e-22 109.8 135 40.7
Mapoly0071s0092 Marchantia polymorpha HOM05D001969 ORTHO05D009003 5.6e-21 104.8 139 56.1
Zm00001eb225500 Zea mays HOM05D001969 ORTHO05D009003 7.4e-21 104.4 138 55.1
FAN02G3777 Fragaria x ananassa HOM05D001969 ORTHO05D009003 1.3e-20 103.6 95 72.6
Zm00001eb414500 Zea mays HOM05D001969 ORTHO05D009003 1.3e-20 103.6 138 54.3
Zm00001eb194600 Zea mays HOM05D001969 ORTHO05D009003 1.6e-20 103.2 131 56.5
Zm00001eb194610 Zea mays HOM05D001969 ORTHO05D009003 1.6e-20 103.2 138 54.3
Zm00001eb072880 Zea mays HOM05D001969 ORTHO05D009003 3.7e-20 102.1 126 57.9
HPP92_010084 Vanilla planifolia HOM05D001969 ORTHO05D009003 6.2e-20 101.3 128 59.4
HPP92_010093 Vanilla planifolia HOM05D001969 ORTHO05D009003 6.2e-20 101.3 128 59.4
PSO384G2148 Papaver somniferum HOM05D001969 ORTHO05D009003 1.8e-19 99.8 119 58.0
Zm00001eb350110 Zea mays HOM05D001969 ORTHO05D009003 1.8e-19 99.8 138 53.6
Manes.06G013500 Manihot esculenta HOM05D001969 ORTHO05D009003 2.4e-19 99.4 107 47.7
Os07g0530300 Oryza sativa ssp. japonica HOM05D001969 ORTHO05D009003 3.1e-19 99.0 130 55.4
PSO339G1404 Papaver somniferum HOM05D001969 ORTHO05D009003 4.0e-19 98.6 123 56.9
AL3G54010 Arabidopsis lyrata HOM05D001969 ORTHO05D009003 6.9e-19 97.8 136 41.9
Ah.07g207260 Amaranthus hybridus HOM05D001969 ORTHO05D003463 2.6e-18 95.9 117 57.3
Rhsim04G0065900 Rhododendron simsii HOM05D001969 ORTHO05D003463 3.4e-18 95.5 104 72.1
PSO017G7338 Papaver somniferum HOM05D001969 ORTHO05D009003 4.5e-18 95.1 130 58.5
Hma1.2p1_0832F.1_g225700 Hydrangea macrophylla HOM05D001969 ORTHO05D009003 7.6e-18 94.4 102 74.5
SMO351G0323 Selaginella moellendorffii HOM05D001969 ORTHO05D009003 1.0e-17 94.0 132 53.8
Cpa.g.sc17.168 Carica papaya HOM05D001969 ORTHO05D003463 2.2e-17 92.8 116 61.2
Pp3c6_17280 Physcomitrium patens HOM05D001969 ORTHO05D009003 1.4e-16 90.1 128 52.3
A09p58710 Brassica napus HOM05D001969 ORTHO05D003463 6.7e-14 81.3 121 34.7
BraA09t41257Z Brassica rapa HOM05D001969 ORTHO05D003463 6.7e-14 81.3 121 34.7
MCO02G305 Micromonas commoda HOM05D001969 ORTHO05D009003 4.3e-13 78.6 123 52.0
BcaC07g41194 Brassica carinata HOM05D001969 ORTHO05D003463 5.7e-13 78.2 121 33.1
C08p42010 Brassica napus HOM05D001969 ORTHO05D003463 5.7e-13 78.2 121 33.1
BolC8t51763H Brassica oleracea HOM05D001969 ORTHO05D003463 5.7e-13 78.2 121 33.1
BcaB08g34941 Brassica carinata HOM05D001969 ORTHO05D003463 1.6e-12 76.6 122 32.0
Zm00001eb414510 Zea mays HOM05D001969 ORTHO05D009003 2.1e-12 76.3 67 49.3
Eucgr.K00932 Eucalyptus grandis HOM05D001969 ORTHO05D009003 1.2e-10 70.5 57 52.6
PSO675G3991 Papaver somniferum HOM05D001969 ORTHO05D009003 1.5e-10 70.1 92 42.4
Thhalv10001991m.g Eutrema salsugineum HOM05D001969 ORTHO05D003463 2.0e-10 69.7 119 28.6
Aa31LG8G17650 Aethionema arabicum HOM05D001969 ORTHO05D003463 1.7e-09 66.6 102 30.4
Cre02.g075550 Chlamydomonas reinhardtii HOM05D001969 ORTHO05D009003 5.5e-08 61.6 132 43.9
SEGI_19463 Sequoiadendron giganteum HOM05D004231 ORTHO05D004814 9.3e-08 60.8 93 46.2
Hma1.2p1_0384F.1_g141150 Hydrangea macrophylla HOM05D001969 ORTHO05D009003 1.0e-06 57.4 73 41.1
FAN02G4205 Fragaria x ananassa HOM05D001969 ORTHO05D003463 5.1e-06 55.1 29 82.8


User provided reference genes

Program Settings