Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G0888 Cannabis sativa HOM05D000395 ORTHO05D000088 1.7e-66 255.8 121 100.0
CANSAT21G2613 Cannabis sativa HOM05D000395 ORTHO05D000088 3.7e-21 105.1 95 57.9
QL09p026053 Quercus lobata HOM05D000395 ORTHO05D000088 2.3e-10 69.3 103 39.8
CANSAT64G0920 Cannabis sativa HOM05D000395 ORTHO05D000088 3.0e-10 68.9 90 36.7
Rhsim02G0221100 Rhododendron simsii HOM05D000395 ORTHO05D000088 3.0e-10 68.9 111 37.8
Actinidia27928 Actinidia chinensis HOM05D000395 ORTHO05D000088 4.3e-09 65.1 87 40.2
Duzib132G0290 Durio zibethinus HOM05D000395 ORTHO05D000088 9.5e-09 63.9 86 40.7
CSS0015634 Camellia sinensis var. sinensis HOM05D000395 ORTHO05D000088 1.2e-08 63.5 86 41.9
FAN10G2931 Fragaria x ananassa HOM05D000395 ORTHO05D000088 1.2e-08 63.5 88 43.2
Solyc07g054630.4 Solanum lycopersicum HOM05D000395 ORTHO05D000088 1.2e-08 63.5 106 36.8
PGSC0003DMG400018369 Solanum tuberosum HOM05D000395 ORTHO05D000088 1.2e-08 63.5 106 35.8
vmacro02164 Vaccinium macrocarpon HOM05D000395 ORTHO05D000088 1.2e-08 63.5 103 35.0
FvH4_7g07610 Fragaria vesca HOM05D000395 ORTHO05D000088 2.1e-08 62.8 88 44.3
FAN06G2119 Fragaria x ananassa HOM05D000395 ORTHO05D000088 2.1e-08 62.8 88 44.3
RcHm_v2.0_Chr1g0343041 Rosa chinensis HOM05D000395 ORTHO05D000088 2.1e-08 62.8 88 43.2
Sopen07g028530 Solanum pennellii HOM05D000395 ORTHO05D000088 2.1e-08 62.8 106 35.8
RhsimUnG0089900 Rhododendron simsii HOM05D008110 ORTHO05D000088 2.8e-08 62.4 107 35.5
CiPaw.06G020300 Carya illinoinensis HOM05D000395 ORTHO05D000088 4.7e-08 61.6 92 34.8
Potri.010G191500 Populus trichocarpa HOM05D000395 ORTHO05D000088 4.7e-08 61.6 85 40.0
Solyc08g068540.4 Solanum lycopersicum HOM05D000395 ORTHO05D000088 4.7e-08 61.6 111 34.2
Thecc.02G092500 Theobroma cacao HOM05D000395 ORTHO05D000088 4.7e-08 61.6 86 40.7
Thecc.02G092700 Theobroma cacao HOM05D000395 ORTHO05D000088 8.1e-08 60.8 86 39.5
Potri.004G147200 Populus trichocarpa HOM05D000395 ORTHO05D000088 1.1e-07 60.5 87 40.2
Manes.15G145100 Manihot esculenta HOM05D000395 ORTHO05D000088 1.4e-07 60.1 88 36.4
Gohir.D04G163100 Gossypium hirsutum HOM05D000395 ORTHO05D000088 2.3e-07 59.3 87 36.8
Gorai.012G151000 Gossypium raimondii HOM05D000395 ORTHO05D000088 2.3e-07 59.3 87 36.8
Gohir.A04G121800 Gossypium hirsutum HOM05D000395 ORTHO05D000088 3.1e-07 58.9 87 36.8
MD02G1160400 Malus domestica HOM05D000395 ORTHO05D000088 3.1e-07 58.9 89 33.7
Atru.chr5.2850 Acer truncatum HOM05D000395 ORTHO05D000088 4.0e-07 58.5 86 37.2
CSS0021571 Camellia sinensis var. sinensis HOM05D000395 ORTHO05D000088 4.0e-07 58.5 111 36.0
TPR.G10227 Trifolium pratense HOM05D000395 ORTHO05D000088 4.0e-07 58.5 86 37.2
COL.COLO4_11742 Corchorus olitorius HOM05D000395 ORTHO05D000088 5.2e-07 58.2 86 41.9
Eucgr.H02901 Eucalyptus grandis HOM05D000395 ORTHO05D000088 5.2e-07 58.2 86 37.2
Rhsim05G0079100 Rhododendron simsii HOM05D000395 ORTHO05D000088 5.2e-07 58.2 86 37.2
GSVIVG01031852001 Vitis vinifera HOM05D000395 ORTHO05D000088 5.2e-07 58.2 86 37.2
QL09p026080 Quercus lobata HOM05D000395 ORTHO05D000088 8.9e-07 57.4 86 36.0
QL09p026224 Quercus lobata HOM05D000395 ORTHO05D000088 8.9e-07 57.4 101 35.6
RcHm_v2.0_Chr2g0134821 Rosa chinensis HOM05D000395 ORTHO05D000088 1.2e-06 57.0 107 32.7
Glyma.09G117200 Glycine max HOM05D000395 ORTHO05D000088 1.5e-06 56.6 87 34.5
VMungo1127G0073 Vigna mungo HOM05D000395 ORTHO05D000088 1.5e-06 56.6 86 37.2
Aqoxy2G00970 Aquilegia oxysepala HOM05D000395 ORTHO05D000088 2.0e-06 56.2 88 35.2
Cfa015899 Carpinus fangiana HOM05D000395 ORTHO05D000088 2.0e-06 56.2 85 40.0
Glyma.12G048600 Glycine max HOM05D000395 ORTHO05D000088 2.0e-06 56.2 86 36.0
Gohir.A13G036700 Gossypium hirsutum HOM05D000395 ORTHO05D000088 2.0e-06 56.2 86 37.2
Gohir.D13G035000 Gossypium hirsutum HOM05D000395 ORTHO05D000088 2.0e-06 56.2 86 37.2
Gorai.013G039700 Gossypium raimondii HOM05D000395 ORTHO05D000088 2.0e-06 56.2 86 37.2
Phvul.011G050600 Phaseolus vulgaris HOM05D000395 ORTHO05D000088 2.0e-06 56.2 86 37.2
QL09p026218 Quercus lobata HOM05D000395 ORTHO05D000088 2.0e-06 56.2 86 36.0
Lj2g0006674 Lotus japonicus HOM05D000395 ORTHO05D000088 2.6e-06 55.8 90 38.9
arahy.Tifrunner.gnm1.ann1.6WA88G Arachis hypogaea HOM05D000395 ORTHO05D000088 4.4e-06 55.1 86 36.0
arahy.Tifrunner.gnm1.ann1.ARIM3Z Arachis hypogaea HOM05D000395 ORTHO05D000088 4.4e-06 55.1 86 36.0
CAN.G322.81 Capsicum annuum HOM05D000395 ORTHO05D002065 5.8e-06 54.7 103 35.9
ClCG09G017680 Citrullus lanatus HOM05D000395 ORTHO05D000088 5.8e-06 54.7 86 36.0
PSO339G2136 Papaver somniferum HOM05D000395 ORTHO05D000088 5.8e-06 54.7 87 36.8
Phvul.007G019500 Phaseolus vulgaris HOM05D000395 ORTHO05D000088 5.8e-06 54.7 108 34.3
Cpa.g.sc62.78 Carica papaya HOM05D000395 ORTHO05D000088 7.6e-06 54.3 86 39.5
DCAR_003837 Daucus carota HOM05D000395 ORTHO05D000088 7.6e-06 54.3 86 34.9
Glyma.11G124100 Glycine max HOM05D000395 ORTHO05D000088 7.6e-06 54.3 85 36.5
Psat6g098040 Pisum sativum HOM05D000395 ORTHO05D004595 7.6e-06 54.3 86 34.9
QL09p026061 Quercus lobata HOM05D000395 ORTHO05D000088 7.6e-06 54.3 102 32.4
Rhsim02G0084600 Rhododendron simsii HOM05D000395 ORTHO05D000088 7.6e-06 54.3 85 31.8
Ca_20814_v3 Cicer arietinum L. HOM05D000395 ORTHO05D000088 9.9e-06 53.9 86 34.9
MELO3C021930.2 Cucumis melo HOM05D000395 ORTHO05D000088 9.9e-06 53.9 86 36.0
Potri.004G147000 Populus trichocarpa HOM05D000395 ORTHO05D000088 9.9e-06 53.9 86 36.0
Sed0004402 Sechium edule HOM05D000395 ORTHO05D000088 9.9e-06 53.9 85 29.4
Sed0026120 Sechium edule HOM05D000395 ORTHO05D000088 9.9e-06 53.9 86 37.2
vmacro02165 Vaccinium macrocarpon HOM05D000395 ORTHO05D000088 9.9e-06 53.9 86 34.9


User provided reference genes

Program Settings