Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT21G0725 Cannabis sativa HOM05D004189 ORTHO05D004092 0.0e+00 1180.2 744 100.0
CANSAT21G0752 Cannabis sativa HOM05D004189 ORTHO05D004092 0.0e+00 1143.3 744 97.8
Gohir.A12G257800 Gossypium hirsutum HOM05D004189 ORTHO05D004092 2.0e-40 171.8 422 34.4
COL.COLO4_14310 Corchorus olitorius HOM05D004189 ORTHO05D004092 1.1e-38 166.0 393 35.1
QL09p014192 Quercus lobata HOM05D004189 ORTHO05D004092 1.4e-38 165.6 394 36.3
Gorai.008G277500 Gossypium raimondii HOM05D004189 ORTHO05D004092 7.1e-38 163.3 422 33.6
Gohir.D12G259100 Gossypium hirsutum HOM05D004189 ORTHO05D004092 2.1e-37 161.8 422 33.4
Duzib205G0656 Durio zibethinus HOM05D004189 ORTHO05D004092 2.7e-37 161.4 409 31.8
QL09p014207 Quercus lobata HOM05D004189 ORTHO05D004092 3.9e-36 157.5 399 35.1
TWI23G0464 Tripterygium wilfordii HOM05D004189 ORTHO05D004092 3.9e-36 157.5 416 33.9
Potri.012G141300 Populus trichocarpa HOM05D004189 ORTHO05D004092 5.1e-36 157.1 378 35.2
Ciclev10004574m.g Citrus clementina HOM05D004189 ORTHO05D004092 8.7e-36 156.4 461 33.8
MD01G1201000 Malus domestica HOM05D004189 ORTHO05D004092 2.1e-34 151.8 439 33.7
Thecc.03G176700 Theobroma cacao HOM05D004189 ORTHO05D004092 3.6e-34 151.0 425 33.2
PGR042G0303 Punica granatum HOM05D004189 ORTHO05D004092 6.2e-34 150.2 499 32.9
FAN03G0039 Fragaria x ananassa HOM05D013146 ORTHO05D004092 8.1e-34 149.8 765 27.1
FAN01G1221 Fragaria x ananassa HOM05D013146 ORTHO05D004092 1.2e-32 146.0 430 31.4
FAN03G0716 Fragaria x ananassa HOM05D013146 ORTHO05D004092 1.2e-32 146.0 765 26.8
Sabra15G0153700 Salix brachista HOM05D004189 ORTHO05D004092 1.2e-32 146.0 377 35.3
RcHm_v2.0_Chr1g0377331 Rosa chinensis HOM05D013146 ORTHO05D004092 1.3e-31 142.5 738 31.0
TAR374G0772 Trochodendron aralioides HOM05D004189 ORTHO05D004092 1.7e-31 142.1 416 31.2
Oeu024223.1 Olea europaea HOM05D004189 ORTHO05D004092 2.7e-29 134.8 441 29.9
Eucgr.A02790 Eucalyptus grandis HOM05D004189 ORTHO05D004092 1.3e-28 132.5 507 30.8
arahy.Tifrunner.gnm1.ann1.EQ3RBX Arachis hypogaea HOM05D004189 ORTHO05D004092 1.8e-28 132.1 530 28.7
arahy.Tifrunner.gnm1.ann1.E2ZRS1 Arachis hypogaea HOM05D004189 ORTHO05D004092 1.1e-27 129.4 514 29.6
Prupe.2G294400 Prunus persica HOM05D004189 ORTHO05D004092 2.5e-27 128.3 406 33.7
Cc03_g07610 Coffea canephora HOM05D004189 ORTHO05D004092 4.3e-27 127.5 411 32.4
Cpa.g.sc107.53 Carica papaya HOM05D004189 ORTHO05D004092 2.1e-26 125.2 464 30.2
RcHm_v2.0_Chr1g0377291 Rosa chinensis HOM05D013146 ORTHO05D004092 3.7e-26 124.4 775 28.8
Actinidia34113 Actinidia chinensis HOM05D004189 ORTHO05D004092 1.8e-25 122.1 433 29.8
AUR62015982 Chenopodium quinoa HOM05D004189 ORTHO05D004092 1.8e-25 122.1 390 32.1
FAN10G2986 Fragaria x ananassa HOM05D013146 ORTHO05D004092 2.9e-23 114.8 741 27.5
MD07G1268800 Malus domestica HOM05D004189 ORTHO05D004092 2.9e-23 114.8 455 31.4
vmacro06681 Vaccinium macrocarpon HOM05D004189 ORTHO05D004092 3.8e-23 114.4 439 31.0
Peaxi162Scf00444g00847 Petunia axillaris HOM05D004189 ORTHO05D004092 8.4e-23 113.2 389 28.5
Dinv28441 Davidia involucrata HOM05D004189 ORTHO05D004092 1.4e-22 112.5 393 30.3
AUR62021191 Chenopodium quinoa HOM05D004189 ORTHO05D004092 9.3e-22 109.8 390 31.8
PGSC0003DMG400014293 Solanum tuberosum HOM05D004189 ORTHO05D004092 1.2e-21 109.4 391 30.7
CAN.G490.32 Capsicum annuum HOM05D004189 ORTHO05D004092 2.1e-21 108.6 391 28.9
Nn6g33499 Nelumbo nucifera HOM05D004189 ORTHO05D004092 2.1e-21 108.6 414 30.9
Lalb_Chr19g0130831 Lupinus albus HOM05D004189 ORTHO05D004092 4.6e-21 107.5 334 30.2
EL10Ac3g05642 Beta vulgaris HOM05D004189 ORTHO05D004092 6.0e-21 107.1 392 31.6
Aqoxy7G00356 Aquilegia oxysepala HOM05D004189 ORTHO05D004092 7.9e-21 106.7 510 27.5
Manes.06G147200 Manihot esculenta HOM05D004189 ORTHO05D004092 7.9e-21 106.7 438 28.1
Sc19g0001510 Simmondsia chinensis HOM05D004189 ORTHO05D004092 1.0e-20 106.3 451 29.7
Solyc03g025810.4 Solanum lycopersicum HOM05D004189 ORTHO05D004092 3.9e-20 104.4 395 28.1
FAN06G1386 Fragaria x ananassa HOM05D013146 ORTHO05D004092 3.3e-19 101.3 375 29.9
Nitab4.5_0000716g0020 Nicotiana tabacum HOM05D004189 ORTHO05D004092 3.3e-19 101.3 408 26.7
ECA238G1803 Erigeron canadensis HOM05D004189 ORTHO05D004092 5.7e-19 100.5 419 27.9
Nitab4.5_0009681g0010 Nicotiana tabacum HOM05D004189 ORTHO05D004092 2.1e-18 98.6 403 26.8
Cfa008320 Carpinus fangiana HOM05D004189 ORTHO05D004092 2.8e-18 98.2 413 31.7
PSO478G0985 Papaver somniferum HOM05D004189 ORTHO05D004092 2.8e-18 98.2 454 29.5
FAN06G2021 Fragaria x ananassa HOM05D013146 ORTHO05D004092 4.8e-18 97.4 373 29.2
Rhsim03G0180900 Rhododendron simsii HOM05D004189 ORTHO05D004092 6.9e-17 93.6 501 27.9
CSS0007027 Camellia sinensis var. sinensis HOM05D004189 ORTHO05D004092 9.0e-17 93.2 379 29.0
CSS0002108 Camellia sinensis var. sinensis HOM05D004189 ORTHO05D004092 2.6e-16 91.7 405 29.1
Glyma.10G236000 Glycine max HOM05D004189 ORTHO05D004092 2.6e-16 91.7 414 29.0
Sopen03g004620 Solanum pennellii HOM05D004189 ORTHO05D004092 4.5e-16 90.9 409 25.7
FAN10G2376 Fragaria x ananassa HOM05D013146 ORTHO05D004092 1.0e-15 89.7 766 26.0
VMungo0720G0841 Vigna mungo HOM05D004189 ORTHO05D004092 2.2e-15 88.6 422 28.7
THA.LOC104811978 Tarenaya hassleriana HOM05D004189 ORTHO05D004092 2.9e-15 88.2 362 29.3
Lj8A24G36 Lonicera japonica HOM05D004189 ORTHO05D004092 1.1e-14 86.3 352 30.1
ATR0680G076 Amborella trichopoda HOM05D004189 ORTHO05D004092 2.5e-14 85.1 408 27.0
Migut.F01119 Erythranthe guttata HOM05D004189 ORTHO05D004092 7.2e-14 83.6 405 30.4
Glyma.20G158500 Glycine max HOM05D004189 ORTHO05D004092 7.2e-14 83.6 413 27.1
Migut.F00339 Erythranthe guttata HOM05D004189 ORTHO05D004092 2.1e-13 82.0 405 26.9
Medtr1g100627 Medicago truncatula HOM05D004189 ORTHO05D004092 2.1e-13 82.0 414 28.0
Ca_25745_v3 Cicer arietinum L. HOM05D004189 ORTHO05D004092 2.7e-13 81.6 366 28.7
Lsat_1_v5_gn_2_132020 Lactuca sativa HOM05D004189 ORTHO05D004092 3.6e-13 81.3 380 29.2
Hund11746 Selenicereus undatus HOM05D004189 ORTHO05D004092 3.6e-13 81.3 330 29.1
Thhalv10013021m.g Eutrema salsugineum HOM05D004189 ORTHO05D004092 4.6e-13 80.9 428 29.2
Lsat_1_v5_gn_8_8621 Lactuca sativa HOM05D004189 ORTHO05D004092 6.1e-13 80.5 324 29.3
Glyma.09G139600 Glycine max HOM05D004189 ORTHO05D004092 1.0e-12 79.7 233 33.0
arahy.Tifrunner.gnm1.ann1.4R9DEN Arachis hypogaea HOM05D001888 ORTHO05D001842 1.3e-12 79.3 404 27.2
Glyma.16G189900 Glycine max HOM05D004189 ORTHO05D004092 3.0e-12 78.2 108 44.4
PSO782G0005 Papaver somniferum HOM05D004189 ORTHO05D004092 3.0e-12 78.2 395 31.4
AL8G26690 Arabidopsis lyrata HOM05D004189 ORTHO05D004092 8.7e-12 76.6 448 26.1
AT5G52300 Arabidopsis thaliana HOM05D004189 ORTHO05D004092 1.1e-11 76.3 429 27.3
A02p11900 Brassica napus HOM05D004189 ORTHO05D004092 1.9e-11 75.5 417 27.1
Phvul.007G069800 Phaseolus vulgaris HOM05D004189 ORTHO05D004092 1.9e-11 75.5 408 27.9
Nitab4.5_0003242g0020 Nicotiana tabacum HOM05D004189 ORTHO05D004092 2.5e-11 75.1 183 33.9
C02p19900 Brassica napus HOM05D004189 ORTHO05D004092 4.3e-11 74.3 400 27.2
BolC2t08123H Brassica oleracea HOM05D004189 ORTHO05D004092 4.3e-11 74.3 400 27.2
FvH4_7g29491 Fragaria vesca HOM05D013146 ORTHO05D004092 4.3e-11 74.3 350 27.1
BcaC03g14545 Brassica carinata HOM05D004189 ORTHO05D004092 5.7e-11 73.9 400 26.8
DCAR_018199 Daucus carota HOM05D004189 ORTHO05D004092 7.4e-11 73.6 449 26.5
Lj2g0010006 Lotus japonicus HOM05D004189 ORTHO05D004092 7.4e-11 73.6 173 33.5
CiPaw.03G106300 Carya illinoinensis HOM05D004189 ORTHO05D004092 9.7e-11 73.2 823 24.1
Glyma.16G193200 Glycine max HOM05D004189 ORTHO05D004092 1.6e-10 72.4 393 27.2
Carub.0008s1240 Capsella rubella HOM05D004189 ORTHO05D004092 4.8e-10 70.9 444 26.4
Nitab4.5_0002721g0060 Nicotiana tabacum HOM05D004189 ORTHO05D004092 8.2e-10 70.1 180 33.9
GSVIVG01028976001 Vitis vinifera HOM05D004189 ORTHO05D004092 1.1e-09 69.7 134 38.8
Lj5g0019959 Lotus japonicus HOM05D004189 ORTHO05D004092 1.8e-09 68.9 794 22.8
arahy.Tifrunner.gnm1.ann1.06RI6S Arachis hypogaea HOM05D004189 ORTHO05D004092 3.1e-09 68.2 412 26.7
BcaB05g21946 Brassica carinata HOM05D004189 ORTHO05D004092 3.1e-09 68.2 426 23.5
CARHR233000 Cardamine hirsuta HOM05D004189 ORTHO05D004092 4.1e-09 67.8 420 26.7
arahy.Tifrunner.gnm1.ann1.UM41MD Arachis hypogaea HOM05D004189 ORTHO05D004092 9.1e-09 66.6 197 32.0
CARHR265280 Cardamine hirsuta HOM05D004189 ORTHO05D004092 9.1e-09 66.6 430 25.3
Phvul.004G117100 Phaseolus vulgaris HOM05D004189 ORTHO05D004092 1.2e-08 66.2 111 38.7
HanXRQChr07g0207021 Helianthus annuus HOM05D004189 ORTHO05D004092 1.5e-08 65.9 418 27.5
AT4G25580 Arabidopsis thaliana HOM05D004189 ORTHO05D004092 2.6e-08 65.1 448 27.9
ECA233G5127 Erigeron canadensis HOM05D004189 ORTHO05D004092 3.4e-08 64.7 356 27.5
Glyma.16G192000 Glycine max HOM05D004189 ORTHO05D004092 4.5e-08 64.3 148 34.5
Oeu056256.2 Olea europaea HOM05D004189 ORTHO05D004092 4.5e-08 64.3 205 31.2
CDE08G1026 Ceratophyllum demersum HOM05D004189 ORTHO05D004092 5.9e-08 63.9 426 27.5
Glyma.16G183700 Glycine max HOM05D004189 ORTHO05D004092 5.9e-08 63.9 155 34.2
Medtr1g100623 Medicago truncatula HOM05D004189 ORTHO05D004092 5.9e-08 63.9 96 38.5
Sed0019460 Sechium edule HOM05D004189 ORTHO05D004092 5.9e-08 63.9 131 38.2
Glyma.16G192732 Glycine max HOM05D004189 ORTHO05D004092 7.7e-08 63.5 155 34.2
Medtr6g045273 Medicago truncatula HOM05D004189 ORTHO05D004092 7.7e-08 63.5 121 39.7
THA.LOC104800253 Tarenaya hassleriana HOM05D004189 ORTHO05D004092 1.0e-07 63.2 367 25.6
Glyma.16G192200 Glycine max HOM05D004189 ORTHO05D004092 1.3e-07 62.8 148 34.5
TPR.G14322 Trifolium pratense HOM05D004189 ORTHO05D004092 1.3e-07 62.8 415 24.3
Carub.0007s1540 Capsella rubella HOM05D004189 ORTHO05D004092 1.7e-07 62.4 418 25.4
A03p56110 Brassica napus HOM05D004189 ORTHO05D004092 2.2e-07 62.0 419 24.8
Potri.015G143950 Populus trichocarpa HOM05D004189 ORTHO05D004092 8.5e-07 60.1 426 26.8
BraA03t14684Z Brassica rapa HOM05D004189 ORTHO05D004092 1.9e-06 58.9 438 25.1
CsaV3_3G049950 Cucumis sativus L. HOM05D004189 ORTHO05D004092 1.9e-06 58.9 232 26.7
Sp7g23610 Schrenkiella parvula HOM05D004189 ORTHO05D004092 1.9e-06 58.9 419 24.8
C07p54440 Brassica napus HOM05D004189 ORTHO05D004092 2.5e-06 58.5 415 24.6
Nn1g01463 Nelumbo nucifera HOM05D004189 ORTHO05D004092 4.2e-06 57.8 359 25.6
PSO782G3290 Papaver somniferum HOM05D057890 ORTHO05D004092 9.4e-06 56.6 337 28.2
Zm00001eb220700 Zea mays HOM05D036983 ORTHO05D037006 9.4e-06 56.6 67 43.3


User provided reference genes

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