Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT16G0047 Cannabis sativa HOM05D007194 ORTHO05D009182 1.7e-137 492.7 251 100.0
RcHm_v2.0_MTg0498961 Rosa chinensis HOM05D007194 ORTHO05D009182 1.5e-133 479.6 251 97.2
Cfa021340 Carpinus fangiana HOM05D007194 ORTHO05D009182 3.5e-130 468.4 251 96.0
DCAR_032453 Daucus carota HOM05D007194 ORTHO05D009182 1.2e-127 459.9 251 94.4
Gorai.001G165900 Gossypium raimondii HOM05D007194 ORTHO05D009182 6.1e-127 457.6 251 93.2
CAN.G1690.2 Capsicum annuum HOM05D007194 ORTHO05D009182 3.1e-126 455.3 251 92.8
AT2G07771 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 4.9e-124 448.0 243 94.2
ATMG00900 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 4.9e-124 448.0 243 94.2
A04p09540 Brassica napus HOM05D007194 ORTHO05D009182 4.9e-124 448.0 251 92.4
BolSC28t60320H Brassica oleracea HOM05D007194 ORTHO05D009182 4.9e-124 448.0 251 92.4
BraSC48t46300Z Brassica rapa HOM05D007194 ORTHO05D009182 4.9e-124 448.0 251 92.4
CARHR283160 Cardamine hirsuta HOM05D007194 ORTHO05D009182 3.2e-123 445.3 243 93.4
HanXRQChr16g0504451 Helianthus annuus HOM05D007194 ORTHO05D009182 3.2e-123 445.3 251 91.6
HanXRQMTg0579111 Helianthus annuus HOM05D007194 ORTHO05D009182 3.2e-123 445.3 251 91.6
Sp3g25540 Schrenkiella parvula HOM05D007194 ORTHO05D009182 4.1e-123 444.9 251 92.0
Lalb_Chr00c24g0406951 Lupinus albus HOM05D007194 ORTHO05D009182 2.3e-121 439.1 245 91.8
Lsat_1_v5_gn_7_100841 Lactuca sativa HOM05D007194 ORTHO05D009182 1.5e-120 436.4 250 90.0
Lsat_1_v5_gn_7_99901 Lactuca sativa HOM05D007194 ORTHO05D009182 1.5e-120 436.4 250 90.0
LjContig00315g0023372 Lotus japonicus HOM05D007194 ORTHO05D009182 2.5e-120 435.6 240 93.8
Sed0021793 Sechium edule HOM05D007194 ORTHO05D009182 2.5e-120 435.6 232 95.7
Lalb_Chr17g0337381 Lupinus albus HOM05D007194 ORTHO05D009182 3.3e-120 435.3 245 90.6
arahy.Tifrunner.gnm1.ann1.14Z8E4 Arachis hypogaea HOM05D007194 ORTHO05D009182 1.2e-119 433.3 240 93.3
arahy.Tifrunner.gnm1.ann1.F9VS0T Arachis hypogaea HOM05D007194 ORTHO05D009182 1.2e-119 433.3 240 93.3
arahy.Tifrunner.gnm1.ann1.SBV1ZL Arachis hypogaea HOM05D007194 ORTHO05D009182 1.2e-119 433.3 240 93.3
Aa31csc239G110 Aethionema arabicum HOM05D007194 ORTHO05D009182 3.6e-119 431.8 243 91.4
CAN.G85.20 Capsicum annuum HOM05D007194 ORTHO05D009182 4.7e-119 431.4 251 89.2
Solyc00g500242.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 1.8e-118 429.5 251 88.4
Solyc00g500277.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 1.8e-118 429.5 251 88.4
Aqoxy3G01137 Aquilegia oxysepala HOM05D007194 ORTHO05D009182 2.3e-118 429.1 233 94.4
AL3G44600 Arabidopsis lyrata HOM05D007194 ORTHO05D009182 3.1e-118 428.7 232 94.0
SGA_v2.0_scaffold400G50840 Striga asiatica HOM05D007194 ORTHO05D009182 1.7e-116 422.9 239 91.2
RhsimMtG0003100 Rhododendron simsii HOM05D007194 ORTHO05D009182 2.2e-116 422.5 222 95.5
RhsimMtG0007900 Rhododendron simsii HOM05D007194 ORTHO05D009182 2.2e-116 422.5 222 95.5
SHI36846 Sapria himalayana HOM05D007194 ORTHO05D009182 4.1e-115 418.3 244 88.5
Lj2P1233T109 Lonicera japonica HOM05D007194 ORTHO05D009182 2.1e-114 416.0 219 96.3
Psat0s922g0240 Pisum sativum HOM05D007194 ORTHO05D009182 4.6e-114 414.8 228 93.4
Nitab4.5_0000031g0190 Nicotiana tabacum HOM05D007194 ORTHO05D009182 1.3e-113 413.3 233 89.7
Dinv06723 Davidia involucrata HOM05D007194 ORTHO05D009182 2.3e-113 412.5 220 95.5
Nn1g09980 Nelumbo nucifera HOM05D007194 ORTHO05D009182 4.0e-110 401.7 213 95.3
EL10Ac7g17455 Beta vulgaris HOM05D007194 ORTHO05D009182 5.2e-110 401.4 235 88.1
SHI36965 Sapria himalayana HOM05D007194 ORTHO05D009182 5.4e-107 391.3 221 89.6
arahy.Tifrunner.gnm1.ann1.GM5VKV Arachis hypogaea HOM05D007194 ORTHO05D009182 8.6e-105 384.0 229 88.2
Lsat_1_v5_gn_1_67041 Lactuca sativa HOM05D007194 ORTHO05D009182 8.6e-105 384.0 214 90.2
BolSC28t60390H Brassica oleracea HOM05D007194 ORTHO05D009182 2.4e-102 375.9 203 94.1
AT2G07681 Arabidopsis thaliana HOM05D007194 ORTHO05D009182 6.8e-102 374.4 228 86.4
TPR.G39619 Trifolium pratense HOM05D007194 ORTHO05D009182 4.4e-101 371.7 203 93.1
BraSC48t46335Z Brassica rapa HOM05D007194 ORTHO05D009182 3.5e-98 362.1 192 94.8
Prupe.1G175300 Prunus persica HOM05D007194 ORTHO05D009182 6.0e-98 361.3 220 85.9
Lsat_1_v5_gn_6_37840 Lactuca sativa HOM05D007194 ORTHO05D009182 1.3e-97 360.1 206 87.9
Lj5P380T4 Lonicera japonica HOM05D007194 ORTHO05D009182 1.1e-94 350.5 230 80.4
Lsat_1_v5_gn_4_20401 Lactuca sativa HOM05D007194 ORTHO05D009182 2.4e-94 349.4 201 87.1
BolSC28t60422H Brassica oleracea HOM05D007194 ORTHO05D009182 2.2e-92 342.8 192 92.2
Eucgr.I01863 Eucalyptus grandis HOM05D007194 ORTHO05D009182 2.2e-92 342.8 251 74.5
Ah.10g028440 Amaranthus hybridus HOM05D007194 ORTHO05D009182 3.2e-91 339.0 198 88.4
Nitab4.5_0001152g0940 Nicotiana tabacum HOM05D007194 ORTHO05D009182 3.0e-89 332.4 203 83.3
SalBow1G0339 Salvia bowleyana HOM05D007194 ORTHO05D009182 5.6e-88 328.2 173 96.0
Sed0000988 Sechium edule HOM05D007194 ORTHO05D009182 5.6e-88 328.2 170 95.9
Sopen00g002730 Solanum pennellii HOM05D007194 ORTHO05D009182 1.3e-87 327.0 178 90.4
TWI15G0311 Tripterygium wilfordii HOM05D007194 ORTHO05D009182 8.1e-87 324.3 171 94.2
Nitab4.5_0002418g0160 Nicotiana tabacum HOM05D007194 ORTHO05D009182 1.4e-86 323.6 209 80.4
Lj2P1235T102 Lonicera japonica HOM05D007194 ORTHO05D009182 1.5e-85 320.1 171 94.2
Lsat_1_v5_gn_5_17681 Lactuca sativa HOM05D007194 ORTHO05D009182 8.7e-81 304.3 189 85.2
Nitab4.5_0012158g0050 Nicotiana tabacum HOM05D007194 ORTHO05D009182 8.7e-81 304.3 210 78.6
Nitab4.5_0006806g0100 Nicotiana tabacum HOM05D007194 ORTHO05D009182 2.8e-79 299.3 209 77.0
ECA039G0021 Erigeron canadensis HOM05D007194 ORTHO05D009182 2.9e-76 289.3 156 92.3
arahy.Tifrunner.gnm1.ann1.UX1VFS Arachis hypogaea HOM05D007194 ORTHO05D009182 2.1e-66 256.5 212 67.5
Ca_07440_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 4.6e-66 255.4 133 94.7
HanXRQChr05g0135281 Helianthus annuus HOM05D007194 ORTHO05D009182 3.8e-60 235.7 129 93.0
EL10Ac8g19071 Beta vulgaris HOM05D007194 ORTHO05D009182 9.4e-59 231.1 139 84.9
Nitab4.5_0001646g0030 Nicotiana tabacum HOM05D007194 ORTHO05D009182 1.6e-58 230.3 130 89.2
TAR625G1253 Trochodendron aralioides HOM05D007194 ORTHO05D009182 1.5e-56 223.8 124 91.9
QL93p0053_0961 Quercus lobata HOM05D007194 ORTHO05D009182 5.7e-56 221.9 112 95.5
arahy.Tifrunner.gnm1.ann1.6A3TYM Arachis hypogaea HOM05D007194 ORTHO05D009182 9.7e-48 194.5 144 73.6
CAN.G1542.2 Capsicum annuum HOM05D007194 ORTHO05D009182 2.2e-47 193.4 118 81.4
Nitab4.5_0003083g0040 Nicotiana tabacum HOM05D007194 ORTHO05D008899 3.7e-47 192.6 109 89.0
unitig_87.g27964 Utricularia gibba HOM05D007194 ORTHO05D009182 3.1e-46 189.5 105 93.3
Lj1P486T6 Lonicera japonica HOM05D007194 ORTHO05D009182 7.7e-45 184.9 108 86.1
CAN.G889.9 Capsicum annuum HOM05D007194 ORTHO05D009182 2.9e-44 183.0 107 87.9
ATR0693G113 Amborella trichopoda HOM05D007194 ORTHO05D009182 2.7e-42 176.4 98 88.8
Ca_14744_v3 Cicer arietinum L. HOM05D007194 ORTHO05D009182 1.0e-41 174.5 88 95.5
Gohir.A08G085962 Gossypium hirsutum HOM05D007194 ORTHO05D009182 2.2e-39 166.8 174 59.2
BraSC48t46286Z Brassica rapa HOM05D007194 ORTHO05D009182 4.8e-39 165.6 99 88.9
SHI26663 Sapria himalayana HOM05D007194 ORTHO05D009182 5.3e-38 162.2 101 84.2
CAN.G1134.4 Capsicum annuum HOM05D007194 ORTHO05D009182 4.5e-37 159.1 110 75.5
ClCG10G007880 Citrullus lanatus HOM05D007194 ORTHO05D009182 1.9e-35 153.7 96 85.4
Glyma.19G075000 Glycine max HOM05D007194 ORTHO05D009182 2.7e-34 149.8 73 97.3
CAN.G1001.43 Capsicum annuum HOM05D000927 ORTHO05D000850 6.1e-34 148.7 77 90.9
CAN.G122.10 Capsicum annuum HOM05D007194 ORTHO05D009182 2.3e-33 146.7 75 93.3
Haze_27474 Corylus avellana HOM05D007194 ORTHO05D009182 2.2e-31 140.2 186 41.4
Gohir.A02G088502 Gossypium hirsutum HOM05D007194 ORTHO05D009182 1.1e-30 137.9 69 92.8
Sopen01g007230 Solanum pennellii HOM05D007194 ORTHO05D009182 1.8e-30 137.1 72 88.9
CAN.G78.2 Capsicum annuum HOM05D007194 ORTHO05D009182 5.4e-30 135.6 68 94.1
EL10Ac5g12442 Beta vulgaris HOM05D004537 ORTHO05D005492 2.7e-26 123.2 79 78.5
Manes.06G014501 Manihot esculenta HOM05D007194 ORTHO05D009182 3.0e-25 119.8 65 87.7
Peaxi162Scf00174g01622 Petunia axillaris HOM05D000219 ORTHO05D000226 4.0e-25 119.4 60 95.0
Nitab4.5_0000859g0090 Nicotiana tabacum HOM05D007194 ORTHO05D009182 7.5e-24 115.2 90 72.2
Solyc12g035840.1 Solanum lycopersicum HOM05D007194 ORTHO05D009182 9.8e-24 114.8 69 82.6
BraSC54t46378Z Brassica rapa HOM05D007194 ORTHO05D009182 1.9e-19 100.5 59 88.1
SHI24634 Sapria himalayana HOM05D007194 ORTHO05D009182 4.4e-16 89.4 132 45.5
Nitab4.5_0000859g0080 Nicotiana tabacum HOM05D000540 ORTHO05D008899 1.3e-15 87.8 54 81.5
SHI21961 Sapria himalayana HOM05D007194 ORTHO05D009182 8.3e-15 85.1 54 83.3
CAN.G380.6 Capsicum annuum HOM05D007194 ORTHO05D009182 2.4e-14 83.6 55 76.4
SHI49604 Sapria himalayana HOM05D007194 ORTHO05D009182 1.9e-11 73.9 37 97.3
Aqoxy4G01620 Aquilegia oxysepala HOM05D007194 ORTHO05D009182 4.7e-10 69.3 36 94.4
Dinv00475 Davidia involucrata HOM05D007194 ORTHO05D009182 6.2e-10 68.9 35 94.3
Phvul.007G104600 Phaseolus vulgaris HOM05D007194 ORTHO05D009182 1.5e-08 64.3 46 73.9
PGSC0003DMG400042571 Solanum tuberosum HOM05D007194 ORTHO05D009182 3.4e-08 63.2 44 75.0


User provided reference genes

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