Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G2432 Cannabis sativa HOM05D006328 ORTHO05D007721 1.8e-145 519.2 268 100.0
FAN25G2838 Fragaria x ananassa HOM05D006328 ORTHO05D007721 7.3e-94 347.8 276 69.2
FAN16G1952 Fragaria x ananassa HOM05D006328 ORTHO05D007721 4.7e-93 345.1 276 69.9
FvH4_3g44830 Fragaria vesca HOM05D006328 ORTHO05D007721 8.1e-93 344.4 276 69.2
FAN11G1794 Fragaria x ananassa HOM05D006328 ORTHO05D007721 2.4e-92 342.8 276 69.6
Prupe.1G537200 Prunus persica HOM05D006328 ORTHO05D007721 4.0e-92 342.0 277 68.2
CiPaw.13G173100 Carya illinoinensis HOM05D006328 ORTHO05D007721 7.6e-91 337.8 275 67.6
RcHm_v2.0_Chr5g0081531 Rosa chinensis HOM05D006328 ORTHO05D007721 2.9e-90 335.9 276 68.1
ClCG08G005770 Citrullus lanatus HOM05D006328 ORTHO05D007721 1.9e-89 333.2 256 67.6
ClCG03G013990 Citrullus lanatus HOM05D006328 ORTHO05D007721 3.2e-89 332.4 257 68.1
MELO3C015648.2 Cucumis melo HOM05D006328 ORTHO05D007721 5.4e-89 331.6 275 64.0
Thecc.09G213100 Theobroma cacao HOM05D006328 ORTHO05D007721 2.1e-88 329.7 273 66.7
Ciclev10016391m.g Citrus clementina HOM05D006328 ORTHO05D007721 2.7e-88 329.3 246 69.5
QL01p007982 Quercus lobata HOM05D006328 ORTHO05D007721 3.5e-88 328.9 275 65.5
FAN21G0799 Fragaria x ananassa HOM05D006328 ORTHO05D007721 6.0e-88 328.2 284 66.2
CsaV3_1G042230 Cucumis sativus L. HOM05D006328 ORTHO05D007721 1.0e-87 327.4 258 65.9
Sed0015335 Sechium edule HOM05D006328 ORTHO05D007721 1.7e-87 326.6 275 65.1
Cpa.g.sc119.81 Carica papaya HOM05D006328 ORTHO05D007721 3.0e-87 325.9 244 70.5
Gohir.D13G217500 Gossypium hirsutum HOM05D006328 ORTHO05D007721 6.6e-87 324.7 268 67.2
Gorai.013G248000 Gossypium raimondii HOM05D006328 ORTHO05D007721 8.7e-87 324.3 268 67.2
MD08G1205200 Malus domestica HOM05D006328 ORTHO05D007721 1.1e-86 323.9 269 66.2
COL.COLO4_34990 Corchorus olitorius HOM05D001240 ORTHO05D002450 1.9e-86 323.2 201 79.1
BraA09t36060Z Brassica rapa HOM05D006328 ORTHO05D007721 2.5e-86 322.8 268 66.0
Glyma.08G315600 Glycine max HOM05D006328 ORTHO05D007721 3.3e-86 322.4 262 66.8
Sp2g18300 Schrenkiella parvula HOM05D006328 ORTHO05D007721 3.3e-86 322.4 272 66.2
EL10Ac4g10350 Beta vulgaris HOM05D006328 ORTHO05D007721 4.3e-86 322.0 274 63.1
Gohir.A13G213700 Gossypium hirsutum HOM05D006328 ORTHO05D007721 4.3e-86 322.0 268 66.8
PGR102G1639 Punica granatum HOM05D006328 ORTHO05D007721 7.3e-86 321.2 277 64.3
TWI60G0846 Tripterygium wilfordii HOM05D006328 ORTHO05D007721 1.3e-85 320.5 233 71.2
Eucgr.B03625 Eucalyptus grandis HOM05D006328 ORTHO05D007721 1.6e-85 320.1 271 64.2
THA.LOC104811061 Tarenaya hassleriana HOM05D006328 ORTHO05D007721 2.1e-85 319.7 280 65.4
GSVIVG01025405001 Vitis vinifera HOM05D006328 ORTHO05D007721 2.8e-85 319.3 190 82.1
Potri.003G216700 Populus trichocarpa HOM05D006328 ORTHO05D007721 6.2e-85 318.2 270 65.2
AL5G20530 Arabidopsis lyrata HOM05D006328 ORTHO05D007721 1.4e-84 317.0 264 65.5
A06p39560 Brassica napus HOM05D006328 ORTHO05D007721 1.8e-84 316.6 273 64.8
BraA06t26871Z Brassica rapa HOM05D006328 ORTHO05D007721 1.8e-84 316.6 273 64.8
Atru.chr3.2259 Acer truncatum HOM05D006328 ORTHO05D007721 2.4e-84 316.2 258 64.3
Atru.chr3.2265 Acer truncatum HOM05D006328 ORTHO05D007721 2.4e-84 316.2 258 64.3
BcaC04g23807 Brassica carinata HOM05D006328 ORTHO05D007721 2.4e-84 316.2 269 66.2
C07p38710 Brassica napus HOM05D006328 ORTHO05D007721 2.4e-84 316.2 271 64.2
C09p04470 Brassica napus HOM05D006328 ORTHO05D007721 2.4e-84 316.2 269 66.2
BolC9t53377H Brassica oleracea HOM05D006328 ORTHO05D007721 2.4e-84 316.2 269 66.2
A09p04230 Brassica napus HOM05D006328 ORTHO05D007721 3.1e-84 315.8 268 65.3
BcaB04g19533 Brassica carinata HOM05D006328 ORTHO05D007721 4.0e-84 315.5 273 64.8
Thhalv10004835m.g Eutrema salsugineum HOM05D006328 ORTHO05D007721 5.3e-84 315.1 270 64.8
arahy.Tifrunner.gnm1.ann1.6HD85A Arachis hypogaea HOM05D006328 ORTHO05D007721 9.0e-84 314.3 253 65.6
Manes.03G088400 Manihot esculenta HOM05D006328 ORTHO05D007721 1.2e-83 313.9 268 64.2
Haze_22985 Corylus avellana HOM05D006328 ORTHO05D007721 1.5e-83 313.5 323 59.4
Nn7g35935 Nelumbo nucifera HOM05D006328 ORTHO05D007721 1.5e-83 313.5 276 63.0
Nitab4.5_0000775g0140 Nicotiana tabacum HOM05D006328 ORTHO05D007721 2.0e-83 313.2 264 64.0
Lj6g0000665 Lotus japonicus HOM05D006328 ORTHO05D007721 2.6e-83 312.8 272 64.7
Phvul.006G042800 Phaseolus vulgaris HOM05D006328 ORTHO05D007721 2.6e-83 312.8 260 65.8
Glyma.18G097300 Glycine max HOM05D006328 ORTHO05D007721 3.4e-83 312.4 245 68.6
Dinv13426 Davidia involucrata HOM05D006328 ORTHO05D007721 4.5e-83 312.0 246 69.5
Sabra03G0161800 Salix brachista HOM05D006328 ORTHO05D007721 5.8e-83 311.6 296 59.8
Lalb_Chr10g0091951 Lupinus albus HOM05D006328 ORTHO05D007721 1.3e-82 310.5 241 69.7
CARHR153570 Cardamine hirsuta HOM05D006328 ORTHO05D007721 2.2e-82 309.7 276 63.4
Nitab4.5_0011368g0030 Nicotiana tabacum HOM05D006328 ORTHO05D007721 2.2e-82 309.7 264 64.0
Hma1.2p1_0062F.1_g034170 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 6.4e-82 308.1 192 77.1
MBI13_g29633_MAGBIO Magnolia biondii HOM05D006328 ORTHO05D007721 6.4e-82 308.1 233 68.2
TPR.G19330 Trifolium pratense HOM05D006328 ORTHO05D007721 8.4e-82 307.8 237 67.1
TAR633G0950 Trochodendron aralioides HOM05D006328 ORTHO05D007721 8.4e-82 307.8 277 61.7
TAR633G1956 Trochodendron aralioides HOM05D006328 ORTHO05D007721 8.4e-82 307.8 277 61.7
Lsat_1_v5_gn_2_101560 Lactuca sativa HOM05D006328 ORTHO05D007721 1.4e-81 307.0 239 65.3
Carub.0003s3500 Capsella rubella HOM05D006328 ORTHO05D007721 2.4e-81 306.2 275 63.3
Oeu029372.1 Olea europaea HOM05D006328 ORTHO05D007721 2.4e-81 306.2 250 64.8
Peaxi162Scf00100g00716 Petunia axillaris HOM05D006328 ORTHO05D007721 3.2e-81 305.8 263 65.0
AT3G32930 Arabidopsis thaliana HOM05D006328 ORTHO05D007721 4.2e-81 305.4 274 63.5
AUR62019196 Chenopodium quinoa HOM05D006328 ORTHO05D007721 4.2e-81 305.4 274 63.5
Medtr3g083310 Medicago truncatula HOM05D006328 ORTHO05D007721 4.2e-81 305.4 263 62.7
PGSC0003DMG400032183 Solanum tuberosum HOM05D006328 ORTHO05D007721 5.4e-81 305.1 264 64.0
HanXRQChr07g0196761 Helianthus annuus HOM05D006328 ORTHO05D007721 9.3e-81 304.3 239 67.4
Actinidia16265 Actinidia chinensis HOM05D006328 ORTHO05D007721 1.2e-80 303.9 268 62.3
Cc01_g01550 Coffea canephora HOM05D006328 ORTHO05D007721 1.6e-80 303.5 273 62.3
ECA238G4721 Erigeron canadensis HOM05D006328 ORTHO05D007721 2.1e-80 303.1 255 63.5
Solyc01g006020.4 Solanum lycopersicum HOM05D006328 ORTHO05D007721 2.1e-80 303.1 268 62.7
Sopen01g002030 Solanum pennellii HOM05D006328 ORTHO05D007721 2.7e-80 302.8 268 62.7
CAN.G158.4 Capsicum annuum HOM05D006328 ORTHO05D007721 7.9e-80 301.2 266 62.4
Aa31LG4G12590 Aethionema arabicum HOM05D006328 ORTHO05D007721 2.3e-79 299.7 271 62.4
Lj1A460T3 Lonicera japonica HOM05D006328 ORTHO05D007721 3.9e-79 298.9 264 62.9
Hund07572 Selenicereus undatus HOM05D006328 ORTHO05D007721 6.7e-79 298.1 270 63.7
CSS0031266 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 2.8e-77 292.7 271 60.1
MSTRG.18860 Avicennia marina HOM05D006328 ORTHO05D007721 1.8e-76 290.0 239 66.1
SGA_v2.0_scaffold6G03437 Striga asiatica HOM05D006328 ORTHO05D007721 1.8e-76 290.0 207 71.0
Migut.D02532 Erythranthe guttata HOM05D006328 ORTHO05D007721 9.0e-76 287.7 273 60.8
DCAR_001992 Daucus carota HOM05D006328 ORTHO05D007721 1.2e-75 287.3 238 63.4
HPP92_009650 Vanilla planifolia HOM05D006328 ORTHO05D007721 3.4e-75 285.8 208 68.8
Duzib150G1371 Durio zibethinus HOM05D006328 ORTHO05D007721 1.3e-74 283.9 268 59.7
Manes.15G105600 Manihot esculenta HOM05D006328 ORTHO05D007721 1.7e-74 283.5 268 60.8
ATR0598G038 Amborella trichopoda HOM05D006328 ORTHO05D007721 2.2e-74 283.1 245 62.4
unitig_746.g26630 Utricularia gibba HOM05D006328 ORTHO05D007721 8.4e-74 281.2 193 73.6
AUR62000025 Chenopodium quinoa HOM05D006328 ORTHO05D007721 1.4e-73 280.4 199 70.9
Ah.06g193050 Amaranthus hybridus HOM05D001193 ORTHO05D007721 3.2e-73 279.3 259 56.8
PSO339G5084 Papaver somniferum HOM05D006328 ORTHO05D007721 3.2e-73 279.3 253 59.7
SalBow6G6014 Salvia bowleyana HOM05D006328 ORTHO05D007721 5.5e-73 278.5 266 58.6
Actinidia06854 Actinidia chinensis HOM05D001240 ORTHO05D002450 3.5e-72 275.8 199 71.9
CDE06G2606 Ceratophyllum demersum HOM05D006328 ORTHO05D007721 7.9e-72 274.6 234 62.0
PSO384G1580 Papaver somniferum HOM05D006328 ORTHO05D007721 7.9e-72 274.6 253 58.9
Aqoxy1G00065 Aquilegia oxysepala HOM05D006328 ORTHO05D007721 1.0e-71 274.2 270 56.7
Rhsim13G0229700 Rhododendron simsii HOM05D006328 ORTHO05D007721 1.5e-67 260.4 307 52.4
Hma1.2p1_0062F.1_g034180 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 6.0e-64 248.4 137 84.7
Zm00001eb108920 Zea mays HOM05D006328 ORTHO05D007721 5.1e-63 245.4 203 64.0
Os07g0608100 Oryza sativa ssp. japonica HOM05D006328 ORTHO05D007721 1.5e-62 243.8 249 55.4
vmacro04215 Vaccinium macrocarpon HOM05D006328 ORTHO05D007721 4.8e-61 238.8 191 66.0
Psat5g101200 Pisum sativum HOM05D006328 ORTHO05D007721 4.2e-57 225.7 195 62.6
VMungo0540G0449 Vigna mungo HOM05D006328 ORTHO05D007721 2.7e-56 223.0 122 86.1
AagrBONN_evm.TU.Sc2ySwM_344.1649 Anthoceros agrestis HOM05D006328 ORTHO05D007721 1.0e-50 204.5 237 46.0
Sc06g0004300 Simmondsia chinensis HOM05D006328 ORTHO05D007721 5.7e-46 188.7 231 52.4
Mapoly0048s0070 Marchantia polymorpha HOM05D006328 ORTHO05D007721 1.3e-45 187.6 196 49.0
Pp3c11_23310 Physcomitrium patens HOM05D006328 ORTHO05D007721 1.8e-44 183.7 194 50.0
vmacro22566 Vaccinium macrocarpon HOM05D006328 ORTHO05D007721 2.6e-43 179.9 105 82.9
CBR_g50072 Chara braunii HOM05D006328 ORTHO05D007721 1.7e-37 160.6 122 59.8
CDE07G1106 Ceratophyllum demersum HOM05D006328 ORTHO05D007721 2.0e-35 153.7 186 45.7
Duzib168G1709 Durio zibethinus HOM05D006328 ORTHO05D007721 2.1e-32 143.7 181 46.4
CSS0049555 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 8.0e-32 141.7 104 71.2
CSS0028438 Camellia sinensis var. sinensis HOM05D006328 ORTHO05D007721 8.8e-31 138.3 103 70.9
Nn2g15765 Nelumbo nucifera HOM05D006328 ORTHO05D007721 9.7e-30 134.8 72 84.7
HanXRQChr04g0113321 Helianthus annuus HOM05D006328 ORTHO05D007721 2.1e-24 117.1 61 85.2
Nn2g15764 Nelumbo nucifera HOM05D006328 ORTHO05D007721 4.5e-19 99.4 90 60.0
HanXRQChr17g0560491 Helianthus annuus HOM05D006328 ORTHO05D007721 1.9e-17 94.0 53 83.0
VMungo0540G1370 Vigna mungo HOM05D006328 ORTHO05D007721 4.2e-17 92.8 141 47.5
unitig_899.g15354 Utricularia gibba HOM05D006328 ORTHO05D007721 7.2e-17 92.0 50 82.0
arahy.Tifrunner.gnm1.ann1.VB18ZC Arachis hypogaea HOM05D006328 ORTHO05D007721 2.1e-16 90.5 130 45.4
Dinv15017 Davidia involucrata HOM05D006328 ORTHO05D007721 6.8e-15 85.5 154 41.6
arahy.Tifrunner.gnm1.ann1.C5G03I Arachis hypogaea HOM05D006328 ORTHO05D007721 2.0e-14 84.0 68 60.3
Sabra06G0010000 Salix brachista HOM05D006328 ORTHO05D007721 3.2e-12 76.6 118 47.5
Hma1.2p1_0062F.1_g034160 Hydrangea macrophylla HOM05D006328 ORTHO05D007721 2.0e-11 73.9 119 44.5
Zm00001eb327220 Zea mays HOM05D006328 ORTHO05D007721 5.6e-09 65.9 68 54.4
arahy.Tifrunner.gnm1.ann1.RQ0K0U Arachis hypogaea HOM05D002734 ORTHO05D003035 2.0e-06 57.4 39 66.7
Dinv08842 Davidia involucrata HOM05D006328 ORTHO05D007721 3.4e-06 56.6 56 55.4


User provided reference genes

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