Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G1201 Cannabis sativa HOM05D036108 ORTHO05D033950 4.7e-87 325.1 167 100.0
CANSAT78G1122 Cannabis sativa HOM05D000162 ORTHO05D000090 1.7e-31 140.6 127 62.2
MD04G1014300 Malus domestica HOM05D000162 ORTHO05D000090 1.7e-12 77.4 116 32.8
COL.COLO4_21653 Corchorus olitorius HOM05D000162 ORTHO05D000090 3.8e-12 76.3 115 36.5
Nn1g02624 Nelumbo nucifera HOM05D000162 ORTHO05D000090 2.1e-10 70.5 77 40.3
Aqoxy5G03349 Aquilegia oxysepala HOM05D000162 ORTHO05D000090 5.2e-09 65.9 65 41.5
Ca_31091_v3 Cicer arietinum L. HOM05D008100 ORTHO05D009715 6.7e-09 65.5 114 31.6
ECA232G4999 Erigeron canadensis HOM05D000162 ORTHO05D000090 1.2e-08 64.7 70 40.0
HanXRQChr14g0435471 Helianthus annuus HOM05D000162 ORTHO05D000090 1.2e-08 64.7 98 33.7
HanXRQChr07g0204971 Helianthus annuus HOM05D000162 ORTHO05D000090 1.5e-08 64.3 75 41.3
HanXRQChr07g0204091 Helianthus annuus HOM05D000162 ORTHO05D000090 3.3e-08 63.2 75 40.0
HanXRQChr14g0435461 Helianthus annuus HOM05D000162 ORTHO05D000090 3.3e-08 63.2 75 40.0
COL.COLO4_34076 Corchorus olitorius HOM05D000162 ORTHO05D000090 4.4e-08 62.8 71 40.8
Ciclev10030383m.g Citrus clementina HOM05D000855 ORTHO05D000003 5.7e-08 62.4 139 26.6
Cc07_g18990 Coffea canephora HOM05D000162 ORTHO05D000090 5.7e-08 62.4 119 32.8
HanXRQChr10g0284831 Helianthus annuus HOM05D000162 ORTHO05D000090 5.7e-08 62.4 75 41.3
Rhsim04G0181600 Rhododendron simsii HOM05D000162 ORTHO05D000090 5.7e-08 62.4 76 38.2
Rhsim04G0181900 Rhododendron simsii HOM05D000162 ORTHO05D000090 5.7e-08 62.4 76 38.2
HanXRQChr07g0203521 Helianthus annuus HOM05D000162 ORTHO05D000090 9.7e-08 61.6 76 36.8
HanXRQChr07g0204941 Helianthus annuus HOM05D000162 ORTHO05D000090 9.7e-08 61.6 76 36.8
Hma1.2p1_1276F.1_g272060 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 9.7e-08 61.6 76 39.5
Actinidia04470 Actinidia chinensis HOM05D000162 ORTHO05D000090 1.3e-07 61.2 76 38.2
CSS0002817 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 1.3e-07 61.2 76 39.5
HanXRQChr07g0203991 Helianthus annuus HOM05D000162 ORTHO05D000090 1.7e-07 60.8 75 38.7
HanXRQChr14g0435491 Helianthus annuus HOM05D000162 ORTHO05D000090 1.7e-07 60.8 76 38.2
Hma1.2p1_0310F.1_g120960 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 1.7e-07 60.8 76 39.5
HanXRQChr07g0204981 Helianthus annuus HOM05D000162 ORTHO05D000090 2.2e-07 60.5 78 34.6
Cc06_g18850 Coffea canephora HOM05D000162 ORTHO05D000090 2.8e-07 60.1 118 39.8
COL.COLO4_20322 Corchorus olitorius HOM05D000162 ORTHO05D000090 2.8e-07 60.1 75 38.7
HanXRQChr07g0204921 Helianthus annuus HOM05D000162 ORTHO05D000090 2.8e-07 60.1 76 38.2
AUR62015977 Chenopodium quinoa HOM05D006287 ORTHO05D008192 3.7e-07 59.7 76 34.2
Peaxi162Scf00342g00103 Petunia axillaris HOM05D000162 ORTHO05D000090 3.7e-07 59.7 66 37.9
Migut.M00051 Erythranthe guttata HOM05D000162 ORTHO05D000090 4.8e-07 59.3 81 37.0
HanXRQChr11g0341941 Helianthus annuus HOM05D000162 ORTHO05D000090 4.8e-07 59.3 76 35.5
Hma1.2p1_1276F.1_g272100 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 4.8e-07 59.3 83 38.6
Medtr5g008255 Medicago truncatula HOM05D010072 ORTHO05D011797 4.8e-07 59.3 76 36.8
vmacro13803 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 4.8e-07 59.3 68 42.6
ECA232G1819 Erigeron canadensis HOM05D000162 ORTHO05D000090 6.3e-07 58.9 59 44.1
Hma1.2p1_1076F.1_g254520 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 6.3e-07 58.9 76 39.5
GSVIVG01018126001 Vitis vinifera HOM05D000162 ORTHO05D000090 6.3e-07 58.9 115 40.9
Ciclev10007125m.g Citrus clementina HOM05D024618 ORTHO05D000090 8.2e-07 58.5 60 41.7
vmacro13797 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 8.2e-07 58.5 68 39.7
ECA232G1497 Erigeron canadensis HOM05D000162 ORTHO05D000090 1.1e-06 58.2 59 40.7
Rhsim12G0060500 Rhododendron simsii HOM05D138555 ORTHO05D010307 1.1e-06 58.2 66 34.8
vmacro13800 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 1.1e-06 58.2 68 39.7
Actinidia08438 Actinidia chinensis HOM05D000162 ORTHO05D000090 1.4e-06 57.8 68 36.8
arahy.Tifrunner.gnm1.ann1.QV0CY4 Arachis hypogaea HOM05D000162 ORTHO05D000090 1.4e-06 57.8 126 31.0
Hma1.2p1_0310F.1_g120980 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 2.4e-06 57.0 66 39.4
MD04G1015700 Malus domestica HOM05D000162 ORTHO05D000090 2.4e-06 57.0 115 26.1
vmacro08432 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 2.4e-06 57.0 68 39.7
vmacro08434 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 2.4e-06 57.0 76 35.5
vmacro13717 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 2.4e-06 57.0 145 30.3
vmacro15413 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 2.4e-06 57.0 68 38.2
Cc02_g15460 Coffea canephora HOM05D000162 ORTHO05D000090 3.1e-06 56.6 124 35.5
Hma1.2p1_1798F.1_g302860 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 3.1e-06 56.6 75 37.3
Hma1.2p1_1798F.1_g302890 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 3.1e-06 56.6 83 36.1
vmacro05074 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 3.1e-06 56.6 66 37.9
vmacro13730 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 3.1e-06 56.6 68 38.2
CANSAT78G1348 Cannabis sativa HOM05D000162 ORTHO05D000090 4.1e-06 56.2 53 50.9
Hma1.2p1_1276F.1_g272140 Hydrangea macrophylla HOM05D000162 ORTHO05D000090 4.1e-06 56.2 76 36.8
Peaxi162Scf00538g00042 Petunia axillaris HOM05D000162 ORTHO05D000090 4.1e-06 56.2 83 34.9
vmacro13802 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 4.1e-06 56.2 68 38.2
ECA238G2994 Erigeron canadensis HOM05D004933 ORTHO05D005465 5.3e-06 55.8 67 44.8
Migut.F00916 Erythranthe guttata HOM05D000162 ORTHO05D000090 5.3e-06 55.8 66 42.4
Medtr1g039290 Medicago truncatula HOM05D010072 ORTHO05D011797 5.3e-06 55.8 127 27.6
vmacro13394 Vaccinium macrocarpon HOM05D006858 ORTHO05D008767 5.3e-06 55.8 59 42.4
arahy.Tifrunner.gnm1.ann1.BX8F04 Arachis hypogaea HOM05D000162 ORTHO05D000090 7.0e-06 55.5 79 35.4
CSS0041306 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 9.1e-06 55.1 66 37.9
COL.COLO4_13954 Corchorus olitorius HOM05D036108 ORTHO05D033950 9.1e-06 55.1 63 41.3
Dinv41259 Davidia involucrata HOM05D000162 ORTHO05D000090 9.1e-06 55.1 77 35.1
FAN11G0418 Fragaria x ananassa HOM05D003757 ORTHO05D000090 9.1e-06 55.1 133 25.6


User provided reference genes

Program Settings