Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G1044 Cannabis sativa HOM05D006707 ORTHO05D008243 1.0e-162 577.8 625 100.0
Prupe.5G232400 Prunus persica HOM05D006707 ORTHO05D008243 1.9e-76 291.2 386 74.6
Ca_07699_v3 Cicer arietinum L. HOM05D006707 ORTHO05D000099 5.2e-74 283.1 386 57.5
Duzib205G0649 Durio zibethinus HOM05D006707 ORTHO05D008243 9.7e-73 278.9 386 69.7
TWI81G0630 Tripterygium wilfordii HOM05D006707 ORTHO05D008243 1.3e-72 278.5 388 74.0
Psat3g124000 Pisum sativum HOM05D006707 ORTHO05D008243 2.4e-71 274.2 386 63.0
CiPaw.15G142400 Carya illinoinensis HOM05D006707 ORTHO05D008243 8.5e-69 265.8 385 74.3
COL.COLO4_35387 Corchorus olitorius HOM05D006707 ORTHO05D008243 1.5e-68 265.0 388 69.1
Peaxi162Scf00683g00048 Petunia axillaris HOM05D006707 ORTHO05D008243 5.5e-68 263.1 388 51.3
Lalb_Chr04g0260761 Lupinus albus HOM05D006707 ORTHO05D008243 4.0e-66 256.9 387 70.0
Solyc03g118790.3 Solanum lycopersicum HOM05D006707 ORTHO05D008243 1.2e-65 255.4 387 54.8
Nitab4.5_0003968g0010 Nicotiana tabacum HOM05D006707 ORTHO05D008243 2.0e-65 254.6 388 55.9
QL11p014448 Quercus lobata HOM05D006707 ORTHO05D008243 2.6e-65 254.2 387 67.4
Nitab4.5_0001456g0170 Nicotiana tabacum HOM05D006707 ORTHO05D008243 9.8e-65 252.3 388 70.9
CARHR093330 Cardamine hirsuta HOM05D006707 ORTHO05D008243 2.8e-64 250.8 386 52.6
Medtr7g070420 Medicago truncatula HOM05D006707 ORTHO05D008243 4.5e-62 243.4 386 59.1
HPP92_007817 Vanilla planifolia HOM05D006707 ORTHO05D008243 7.7e-62 242.7 386 39.4
Aqoxy3G00090 Aquilegia oxysepala HOM05D006707 ORTHO05D008243 1.7e-61 241.5 394 67.8
Cc04_g06350 Coffea canephora HOM05D006707 ORTHO05D008243 1.1e-60 238.8 388 71.1
Thecc.03G054200 Theobroma cacao HOM05D006707 ORTHO05D008243 1.5e-60 238.4 388 64.4
Sabra15G0069900 Salix brachista HOM05D006707 ORTHO05D008243 4.2e-60 236.9 388 67.8
QL11p013929 Quercus lobata HOM05D006707 ORTHO05D008243 1.0e-58 232.3 387 64.9
Cfa019000 Carpinus fangiana HOM05D006707 ORTHO05D008243 1.4e-58 231.9 228 75.0
CsaV3_1G004300 Cucumis sativus L. HOM05D006707 ORTHO05D008243 1.8e-58 231.5 386 69.4
Lsat_1_v5_gn_6_99620 Lactuca sativa HOM05D006707 ORTHO05D008243 2.3e-58 231.1 395 63.8
TAR622G1063 Trochodendron aralioides HOM05D006707 ORTHO05D008243 4.0e-58 230.3 384 56.8
PGSC0003DMG400005747 Solanum tuberosum HOM05D006707 ORTHO05D008243 8.9e-58 229.2 387 51.9
EL10Ac3g06722 Beta vulgaris HOM05D006707 ORTHO05D008243 2.2e-56 224.6 386 67.4
Dinv07298 Davidia involucrata HOM05D006707 ORTHO05D008243 2.2e-56 224.6 217 73.3
Dinv27614 Davidia involucrata HOM05D006707 ORTHO05D008243 2.2e-56 224.6 217 73.3
vmacro07812 Vaccinium macrocarpon HOM05D006707 ORTHO05D008243 2.2e-56 224.6 388 47.2
ClCG06G014360 Citrullus lanatus HOM05D006707 ORTHO05D008243 6.3e-56 223.0 386 67.9
GSVIVG01016661001 Vitis vinifera HOM05D006707 ORTHO05D008243 2.4e-55 221.1 219 71.2
AUR62035349 Chenopodium quinoa HOM05D006707 ORTHO05D008243 4.1e-55 220.3 396 66.2
Ah.04g153500 Amaranthus hybridus HOM05D006707 ORTHO05D008243 7.0e-55 219.5 386 67.6
Sed0000825 Sechium edule HOM05D006707 ORTHO05D008243 7.0e-55 219.5 460 63.5
FvH4_5g17250 Fragaria vesca HOM05D006707 ORTHO05D008243 2.7e-54 217.6 219 68.0
FAN18G2052 Fragaria x ananassa HOM05D006707 ORTHO05D008243 2.7e-54 217.6 219 68.0
Nn4g24204 Nelumbo nucifera HOM05D006707 ORTHO05D008243 5.9e-54 216.5 217 72.8
Lj5A157G52 Lonicera japonica HOM05D006707 ORTHO05D008243 7.8e-54 216.1 376 68.9
RhsimUnG0220600 Rhododendron simsii HOM05D006707 ORTHO05D008243 2.3e-53 214.5 225 68.0
RhsimUnG0239000 Rhododendron simsii HOM05D006707 ORTHO05D008243 2.3e-53 214.5 225 68.0
FAN08G3326 Fragaria x ananassa HOM05D006707 ORTHO05D008243 3.9e-53 213.8 217 68.2
Rhsim03G0042300 Rhododendron simsii HOM05D006707 ORTHO05D008243 1.5e-52 211.8 225 67.6
Sopen03g037740 Solanum pennellii HOM05D006707 ORTHO05D008243 1.5e-52 211.8 387 50.6
RcHm_v2.0_Chr7g0178541 Rosa chinensis HOM05D006707 ORTHO05D008243 1.9e-52 211.5 228 70.2
MD06G1231100 Malus domestica HOM05D006707 ORTHO05D008243 2.5e-52 211.1 388 44.3
Haze_21123 Corylus avellana HOM05D006707 ORTHO05D008243 9.5e-52 209.1 219 73.5
Potri.015G039300 Populus trichocarpa HOM05D006707 ORTHO05D008243 3.1e-50 204.1 217 66.8
Atru.BG.186.p Acer truncatum HOM05D006707 ORTHO05D008243 5.2e-50 203.4 216 71.8
CAN.G1129.54 Capsicum annuum HOM05D006707 ORTHO05D008243 5.2e-50 203.4 387 49.6
Manes.06G007500 Manihot esculenta HOM05D006707 ORTHO05D008243 2.0e-49 201.4 217 67.3
Actinidia25143 Actinidia chinensis HOM05D006707 ORTHO05D008243 2.6e-49 201.1 217 67.7
Lj5P156T67 Lonicera japonica HOM05D006707 ORTHO05D008243 2.6e-49 201.1 217 68.2
Cpa.g.sc3.405 Carica papaya HOM05D006707 ORTHO05D008243 3.4e-49 200.7 387 64.1
Sabra15G0038500 Salix brachista HOM05D006707 ORTHO05D008243 3.4e-49 200.7 215 67.0
HanXRQChr10g0279071 Helianthus annuus HOM05D006707 ORTHO05D008243 5.8e-49 199.9 378 63.0
Sabra15G0070700 Salix brachista HOM05D006707 ORTHO05D008243 9.8e-49 199.1 215 66.5
Sabra15G0057600 Salix brachista HOM05D006707 ORTHO05D008243 1.1e-47 195.7 215 65.6
Oeu010709.1 Olea europaea HOM05D006707 ORTHO05D008243 2.4e-47 194.5 219 65.3
SalBow6G7169 Salvia bowleyana HOM05D006707 ORTHO05D008243 2.4e-47 194.5 386 61.9
AUR62035893 Chenopodium quinoa HOM05D006707 ORTHO05D008243 4.1e-47 193.7 386 63.2
Glyma.18G207800 Glycine max HOM05D006707 ORTHO05D008243 1.2e-46 192.2 388 65.5
MSTRG.16972 Avicennia marina HOM05D006707 ORTHO05D008243 2.7e-46 191.0 219 64.8
TPR.G37093 Trifolium pratense HOM05D006707 ORTHO05D008243 2.3e-45 188.0 219 64.4
Lj1g0019371 Lotus japonicus HOM05D006707 ORTHO05D008243 6.6e-45 186.4 219 65.3
VMungo1383G0390 Vigna mungo HOM05D006707 ORTHO05D008243 6.6e-45 186.4 388 64.7
Sc10g0004790 Simmondsia chinensis HOM05D006707 ORTHO05D008243 1.5e-44 185.3 217 64.5
Phvul.010G093200 Phaseolus vulgaris HOM05D006707 ORTHO05D008243 2.5e-44 184.5 388 64.4
TPR.G35815 Trifolium pratense HOM05D006707 ORTHO05D008243 1.2e-43 182.2 230 62.2
Migut.I00309 Erythranthe guttata HOM05D006707 ORTHO05D008243 1.6e-43 181.8 219 62.6
Aa31LG8G4870 Aethionema arabicum HOM05D006707 ORTHO05D008243 2.8e-43 181.0 217 68.7
PGR044G0521 Punica granatum HOM05D006707 ORTHO05D008243 1.4e-42 178.7 218 65.6
Hund22248 Selenicereus undatus HOM05D006707 ORTHO05D008243 2.3e-42 177.9 395 50.6
THA.LOC104820351 Tarenaya hassleriana HOM05D006707 ORTHO05D008243 3.1e-42 177.6 217 68.7
Thhalv10020183m.g Eutrema salsugineum HOM05D006707 ORTHO05D008243 6.8e-42 176.4 386 55.2
PSO478G5041 Papaver somniferum HOM05D006707 ORTHO05D008243 2.0e-41 174.9 216 65.3
BcaC05g28725 Brassica carinata HOM05D006707 ORTHO05D008243 4.4e-41 173.7 217 67.3
BolC5t33562H Brassica oleracea HOM05D006707 ORTHO05D008243 4.4e-41 173.7 217 67.3
SGA_v2.0_scaffold192G40603 Striga asiatica HOM05D006707 ORTHO05D008243 5.8e-41 173.3 458 64.8
AT3G18020 Arabidopsis thaliana HOM05D006707 ORTHO05D008243 7.5e-41 172.9 217 65.9
AL3G31170 Arabidopsis lyrata HOM05D006707 ORTHO05D008243 9.8e-41 172.6 217 65.9
DCAR_014733 Daucus carota HOM05D006707 ORTHO05D008243 1.3e-40 172.2 226 60.2
Eucgr.K02270 Eucalyptus grandis HOM05D006707 ORTHO05D008243 1.7e-40 171.8 390 48.5
BraA05t22012Z Brassica rapa HOM05D006707 ORTHO05D008243 6.4e-40 169.9 217 66.8
Carub.0003s1773 Capsella rubella HOM05D006707 ORTHO05D008243 8.3e-40 169.5 217 65.0
A05p31810 Brassica napus HOM05D006707 ORTHO05D008243 1.1e-39 169.1 217 65.9
C05p48280 Brassica napus HOM05D006707 ORTHO05D008243 1.9e-39 168.3 217 65.9
Sp3g16130 Schrenkiella parvula HOM05D006707 ORTHO05D008243 9.2e-39 166.0 217 66.4
BcaB06g25867 Brassica carinata HOM05D006707 ORTHO05D008243 7.8e-38 162.9 217 64.5
arahy.Tifrunner.gnm1.ann1.72MQAV Arachis hypogaea HOM05D000449 ORTHO05D008243 6.6e-37 159.8 218 59.2
arahy.Tifrunner.gnm1.ann1.U18B68 Arachis hypogaea HOM05D000449 ORTHO05D008243 8.1e-35 152.9 213 59.2
arahy.Tifrunner.gnm1.ann1.09GK0V Arachis hypogaea HOM05D004415 ORTHO05D005198 2.3e-34 151.4 213 58.7
Rhsim03G0043000 Rhododendron simsii HOM05D006707 ORTHO05D008243 8.9e-34 149.4 230 71.3
ECA246G2801 Erigeron canadensis HOM05D006707 ORTHO05D008243 9.2e-31 139.4 228 53.5
ATR0564G450 Amborella trichopoda HOM05D006707 ORTHO05D008243 1.2e-30 139.0 222 57.2
Os07g0674300 Oryza sativa ssp. japonica HOM05D006707 ORTHO05D008243 2.3e-29 134.8 404 30.4
CDE07G1516 Ceratophyllum demersum HOM05D006707 ORTHO05D008243 1.6e-27 128.6 372 50.5
arahy.Tifrunner.gnm1.ann1.1F7K7B Arachis hypogaea HOM05D006707 ORTHO05D008243 2.8e-27 127.9 203 39.4
Zm00001eb111370 Zea mays HOM05D006707 ORTHO05D008243 8.1e-27 126.3 402 28.9
HanXRQChr10g0277831 Helianthus annuus HOM05D006707 ORTHO05D008243 1.8e-26 125.2 336 48.8
Lj5P156T63 Lonicera japonica HOM05D006707 ORTHO05D008243 1.5e-25 122.1 78 76.9
Haze_18837 Corylus avellana HOM05D006707 ORTHO05D008243 2.0e-25 121.7 90 65.6
PSO017G3187 Papaver somniferum HOM05D006707 ORTHO05D008243 4.9e-24 117.1 103 55.3
SEGI_24072 Sequoiadendron giganteum HOM05D006707 ORTHO05D008243 1.3e-19 102.4 202 56.9
FAN13G2143 Fragaria x ananassa HOM05D006707 ORTHO05D008243 2.8e-19 101.3 221 32.6
BraA05t22010Z Brassica rapa HOM05D006707 ORTHO05D008243 3.6e-19 100.9 78 65.4
RhsimUnG0220500 Rhododendron simsii HOM05D006707 ORTHO05D008243 3.2e-15 87.8 55 70.9
Ciclev10024364m.g Citrus clementina HOM05D006707 ORTHO05D008243 2.1e-14 85.1 61 65.6
CSS0017365 Camellia sinensis var. sinensis HOM05D006707 ORTHO05D008243 5.1e-13 80.5 60 60.0
CSS0026236 Camellia sinensis var. sinensis HOM05D006707 ORTHO05D008243 5.1e-13 80.5 60 60.0
arahy.Tifrunner.gnm1.ann1.55ENF0 Arachis hypogaea HOM05D006707 ORTHO05D008243 6.6e-13 80.1 140 32.9
PSO017G4261 Papaver somniferum HOM05D006707 ORTHO05D008243 9.6e-12 76.3 44 75.0
MELO3C017354.2 Cucumis melo HOM05D006707 ORTHO05D008243 1.8e-10 72.0 41 78.0
Manes.06G007451 Manihot esculenta HOM05D006707 ORTHO05D008243 5.8e-09 67.0 43 72.1
Phvul.008G091500 Phaseolus vulgaris HOM05D006707 ORTHO05D008243 5.8e-09 67.0 83 47.0
QL11p014441 Quercus lobata HOM05D006707 ORTHO05D008243 1.1e-07 62.8 44 65.9
QL10p028425 Quercus lobata HOM05D006707 ORTHO05D008243 3.5e-06 57.8 39 71.8


User provided reference genes

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