Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G0952 Cannabis sativa HOM05D000030 ORTHO05D000009 1.1e-68 263.1 127 100.0
CANSAT21G2532 Cannabis sativa HOM05D000030 ORTHO05D000009 3.4e-65 251.5 123 97.6
CANSAT35G1459 Cannabis sativa HOM05D000030 ORTHO05D000009 2.2e-16 89.4 103 45.6
CiPaw.03G002200 Carya illinoinensis HOM05D000030 ORTHO05D000009 1.4e-13 80.1 129 39.5
CSS0020418 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000009 1.8e-13 79.7 79 53.2
QL01p050278 Quercus lobata HOM05D000030 ORTHO05D000009 2.3e-13 79.3 103 41.7
QL01p050285 Quercus lobata HOM05D000030 ORTHO05D000009 2.3e-13 79.3 103 41.7
Atru.chr11.822 Acer truncatum HOM05D000030 ORTHO05D000031 3.0e-13 79.0 82 51.2
Atru.chr1.2878 Acer truncatum HOM05D000030 ORTHO05D000009 2.5e-12 75.9 109 42.2
Prupe.3G104400 Prunus persica HOM05D013694 ORTHO05D013595 1.7e-11 73.2 91 46.2
QL04p060590 Quercus lobata HOM05D000030 ORTHO05D000009 6.3e-11 71.2 76 47.4
QL06p035328 Quercus lobata HOM05D000030 ORTHO05D000009 6.3e-11 71.2 76 47.4
QL10p045275 Quercus lobata HOM05D000030 ORTHO05D000009 6.3e-11 71.2 76 47.4
QL12p026216 Quercus lobata HOM05D000030 ORTHO05D000009 6.3e-11 71.2 76 47.4
CiPaw.01G071900 Carya illinoinensis HOM05D000030 ORTHO05D000009 8.2e-11 70.9 84 41.7
Atru.chr13.1604 Acer truncatum HOM05D000030 ORTHO05D000009 1.4e-10 70.1 87 44.8
QL09p025940 Quercus lobata HOM05D000030 ORTHO05D000009 1.8e-10 69.7 57 57.9
QL09p048176 Quercus lobata HOM05D000030 ORTHO05D000009 1.8e-10 69.7 57 57.9
COL.COLO4_33287 Corchorus olitorius HOM05D000030 ORTHO05D000009 3.1e-10 68.9 79 41.8
Hma1.2p1_0180F.1_g079730 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 4.1e-10 68.6 97 37.1
QL11p045157 Quercus lobata HOM05D000030 ORTHO05D000009 4.1e-10 68.6 77 45.5
Oeu017856.1 Olea europaea HOM05D000030 ORTHO05D000031 6.9e-10 67.8 78 46.2
EL10Ac6g14133 Beta vulgaris HOM05D000030 ORTHO05D000009 9.1e-10 67.4 115 36.5
Sed0000667 Sechium edule HOM05D000030 ORTHO05D000009 9.1e-10 67.4 89 41.6
Hma1.2p1_0572F.1_g181290 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 1.2e-09 67.0 98 35.7
Oeu040213.1 Olea europaea HOM05D000030 ORTHO05D000009 1.5e-09 66.6 93 48.4
Atru.chr4.1208 Acer truncatum HOM05D000030 ORTHO05D000009 2.0e-09 66.2 78 41.0
Hma1.2p1_0357F.1_g134210 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.0e-09 66.2 81 43.2
PSO063G7235 Papaver somniferum HOM05D013439 ORTHO05D017102 2.0e-09 66.2 90 41.1
PSO170G6499 Papaver somniferum HOM05D013439 ORTHO05D017102 2.0e-09 66.2 90 41.1
PSO675G6644 Papaver somniferum HOM05D013439 ORTHO05D000009 2.0e-09 66.2 90 41.1
Atru.chr5.1722 Acer truncatum HOM05D000030 ORTHO05D000009 4.5e-09 65.1 78 41.0
COL.COLO4_33713 Corchorus olitorius HOM05D000030 ORTHO05D012669 4.5e-09 65.1 81 39.5
PSO210G3418 Papaver somniferum HOM05D013439 ORTHO05D000009 4.5e-09 65.1 90 40.0
Potri.011G125951 Populus trichocarpa HOM05D000030 ORTHO05D000009 4.5e-09 65.1 83 43.4
QL06p050254 Quercus lobata HOM05D000030 ORTHO05D000009 4.5e-09 65.1 54 53.7
EL10Ac6g13791 Beta vulgaris HOM05D000030 ORTHO05D000009 5.9e-09 64.7 115 35.7
PSO210G7641 Papaver somniferum HOM05D013439 ORTHO05D017102 7.7e-09 64.3 90 40.0
COL.COLO4_26855 Corchorus olitorius HOM05D000030 ORTHO05D000009 1.3e-08 63.5 79 39.2
Oeu045963.1 Olea europaea HOM05D000030 ORTHO05D000009 1.3e-08 63.5 94 39.4
SHI24752 Sapria himalayana HOM05D000030 ORTHO05D000009 1.3e-08 63.5 108 38.0
Hma1.2p1_1597F.1_g292850 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 1.7e-08 63.2 85 41.2
QL02p032160 Quercus lobata HOM05D000030 ORTHO05D000009 1.7e-08 63.2 87 41.4
QL04p008657 Quercus lobata HOM05D000030 ORTHO05D000009 1.7e-08 63.2 87 41.4
QL08p057179 Quercus lobata HOM05D000030 ORTHO05D000009 1.7e-08 63.2 87 41.4
QL11p054270 Quercus lobata HOM05D000030 ORTHO05D000009 1.7e-08 63.2 87 41.4
Hma1.2p1_0336F.1_g129040 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.2e-08 62.8 97 35.1
Hma1.2p1_0348F.1_g131940 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.2e-08 62.8 97 36.1
PSO541G3475 Papaver somniferum HOM05D000030 ORTHO05D000009 2.2e-08 62.8 84 36.9
Rhsim01G0167900 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.2e-08 62.8 129 35.7
TPR.G35969 Trifolium pratense HOM05D000030 ORTHO05D000009 2.9e-08 62.4 82 37.8
COL.COLO4_14010 Corchorus olitorius HOM05D015606 ORTHO05D012669 3.8e-08 62.0 81 37.0
Dinv10810 Davidia involucrata HOM05D000030 ORTHO05D000009 3.8e-08 62.0 93 40.9
Hma1.2p1_0875F.1_g231530 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 3.8e-08 62.0 85 40.0
PSO210G6084 Papaver somniferum HOM05D000030 ORTHO05D000009 5.0e-08 61.6 82 39.0
QL11p010017 Quercus lobata HOM05D000030 ORTHO05D000009 5.0e-08 61.6 87 40.2
QL11p010287 Quercus lobata HOM05D000030 ORTHO05D000009 5.0e-08 61.6 87 40.2
SHI13005 Sapria himalayana HOM05D000030 ORTHO05D000009 5.0e-08 61.6 132 34.8
Ah.12g059630 Amaranthus hybridus HOM05D000030 ORTHO05D000009 6.5e-08 61.2 88 37.5
EL10Ac5g11867 Beta vulgaris HOM05D000030 ORTHO05D000009 6.5e-08 61.2 90 37.8
QL09p001102 Quercus lobata HOM05D000030 ORTHO05D003511 6.5e-08 61.2 83 42.2
CiPaw.16G102600 Carya illinoinensis HOM05D000030 ORTHO05D024911 8.5e-08 60.8 63 41.3
Hma1.2p1_0705F.1_g206900 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 8.5e-08 60.8 83 39.8
Rhsim12G0090800 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.1e-07 60.5 123 36.6
ClCG04G002230 Citrullus lanatus HOM05D013694 ORTHO05D016142 1.4e-07 60.1 82 36.6
Oeu018575.1 Olea europaea HOM05D000030 ORTHO05D000009 1.4e-07 60.1 88 37.5
QL02p078120 Quercus lobata HOM05D000030 ORTHO05D000009 1.4e-07 60.1 75 42.7
QL05p039535 Quercus lobata HOM05D000030 ORTHO05D000009 1.4e-07 60.1 75 42.7
QL08p020585 Quercus lobata HOM05D000030 ORTHO05D000009 1.4e-07 60.1 75 42.7
QL08p047975 Quercus lobata HOM05D000030 ORTHO05D000009 1.4e-07 60.1 75 42.7
Manes.16G104301 Manihot esculenta HOM05D000030 ORTHO05D000009 1.9e-07 59.7 68 38.2
RcHm_v2.0_Chr1g0367431 Rosa chinensis HOM05D000030 ORTHO05D000009 1.9e-07 59.7 90 38.9
RcHm_v2.0_Chr6g0268731 Rosa chinensis HOM05D000030 ORTHO05D000009 1.9e-07 59.7 90 38.9
Ah.16g101830 Amaranthus hybridus HOM05D000001 ORTHO05D001705 2.5e-07 59.3 87 36.8
RcHm_v2.0_Chr7g0205391 Rosa chinensis HOM05D000030 ORTHO05D000009 2.5e-07 59.3 90 38.9
Haze_23615 Corylus avellana HOM05D037576 ORTHO05D024911 3.2e-07 58.9 73 41.1
CsaV3_3G048760 Cucumis sativus L. HOM05D000030 ORTHO05D000009 3.2e-07 58.9 96 36.5
Hma1.2p1_1137F.1_g260640 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 3.2e-07 58.9 78 42.3
Hma1.2p1_1553F.1_g290280 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 3.2e-07 58.9 115 32.2
Manes.02G223133 Manihot esculenta HOM05D000030 ORTHO05D000009 4.2e-07 58.5 67 38.8
PSO384G0868 Papaver somniferum HOM05D013439 ORTHO05D017102 4.2e-07 58.5 84 41.7
PSO724G0526 Papaver somniferum HOM05D000030 ORTHO05D017102 4.2e-07 58.5 91 39.6
Ah.02g118510 Amaranthus hybridus HOM05D000030 ORTHO05D000009 5.5e-07 58.2 110 30.9
AUR62026612 Chenopodium quinoa HOM05D000030 ORTHO05D000009 5.5e-07 58.2 105 36.2
Prupe.8G075500 Prunus persica HOM05D000030 ORTHO05D000031 5.5e-07 58.2 88 37.5
Rhsim09G0041400 Rhododendron simsii HOM05D000030 ORTHO05D000009 5.5e-07 58.2 78 41.0
Atru.chr5.2284 Acer truncatum HOM05D000030 ORTHO05D000009 7.2e-07 57.8 88 42.0
Ah.09g224960 Amaranthus hybridus HOM05D000030 ORTHO05D000009 7.2e-07 57.8 110 32.7
AUR62042148 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.2e-07 57.8 105 36.2
AUR62043532 Chenopodium quinoa HOM05D000030 ORTHO05D000009 7.2e-07 57.8 102 32.4
Rhsim02G0143700 Rhododendron simsii HOM05D000030 ORTHO05D000009 7.2e-07 57.8 134 35.1
QL04p026250 Quercus lobata HOM05D000030 ORTHO05D000009 9.4e-07 57.4 87 39.1
Rhsim11G0012000 Rhododendron simsii HOM05D000030 ORTHO05D000009 9.4e-07 57.4 140 34.3
AUR62000342 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-06 57.0 105 36.2
AUR62002170 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-06 57.0 105 36.2
AUR62002667 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-06 57.0 105 36.2
AUR62005031 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-06 57.0 105 36.2
AUR62005730 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-06 57.0 105 36.2
AUR62009853 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-06 57.0 105 36.2
AUR62010088 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-06 57.0 105 36.2
AUR62015065 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-06 57.0 105 36.2
AUR62015407 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-06 57.0 105 36.2
AUR62016676 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-06 57.0 105 36.2
AUR62017173 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-06 57.0 105 36.2
AUR62018138 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-06 57.0 105 36.2
AUR62020310 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-06 57.0 105 36.2
AUR62022944 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-06 57.0 105 36.2
AUR62022996 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-06 57.0 105 36.2
AUR62023960 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-06 57.0 105 36.2
AUR62025024 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-06 57.0 105 36.2
AUR62025491 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-06 57.0 105 36.2
AUR62028140 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-06 57.0 105 36.2
AUR62028487 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-06 57.0 105 36.2
AUR62029206 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-06 57.0 105 36.2
AUR62029825 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-06 57.0 105 36.2
AUR62032482 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-06 57.0 105 36.2
AUR62034112 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-06 57.0 105 36.2
AUR62037624 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-06 57.0 105 36.2
AUR62038281 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-06 57.0 105 36.2
AUR62038973 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-06 57.0 105 36.2
AUR62040597 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-06 57.0 105 36.2
AUR62043566 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-06 57.0 105 36.2
AUR62044260 Chenopodium quinoa HOM05D000030 ORTHO05D000009 1.2e-06 57.0 105 36.2
COL.COLO4_23658 Corchorus olitorius HOM05D000030 ORTHO05D012669 1.2e-06 57.0 76 38.2
Manes.11G097150 Manihot esculenta HOM05D000030 ORTHO05D000031 1.6e-06 56.6 67 37.3
Manes.14G165250 Manihot esculenta HOM05D000030 ORTHO05D000009 1.6e-06 56.6 79 36.7
PSO063G0598 Papaver somniferum HOM05D000030 ORTHO05D000009 1.6e-06 56.6 75 41.3
Atru.chr6.238 Acer truncatum HOM05D000030 ORTHO05D000009 2.1e-06 56.2 79 45.6
Atru.chr6.241 Acer truncatum HOM05D000030 ORTHO05D000009 2.1e-06 56.2 79 45.6
COL.COLO4_13802 Corchorus olitorius HOM05D000030 ORTHO05D000009 2.1e-06 56.2 62 41.9
FAN21G3133 Fragaria x ananassa HOM05D012862 ORTHO05D014226 2.1e-06 56.2 98 33.7
Hma1.2p1_0055F.1_g031250 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.1e-06 56.2 88 35.2
Hma1.2p1_0663F.1_g198780 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.1e-06 56.2 79 44.3
Hma1.2p1_1689F.1_g297600 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.1e-06 56.2 104 35.6
Rhsim11G0015000 Rhododendron simsii HOM05D000030 ORTHO05D000009 2.1e-06 56.2 130 33.1
SHI14269 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-06 56.2 100 30.0
Hund23602 Selenicereus undatus HOM05D000030 ORTHO05D000009 2.1e-06 56.2 85 37.6
CiPaw.15G133400 Carya illinoinensis HOM05D000030 ORTHO05D000009 2.7e-06 55.8 90 34.4
Hma1.2p1_2681F.1_g326860 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.7e-06 55.8 82 39.0
Hma1.2p1_3025F.1_g331800 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 2.7e-06 55.8 79 44.3
TPR.G20900 Trifolium pratense HOM05D000030 ORTHO05D000009 2.7e-06 55.8 56 41.1
AUR62031365 Chenopodium quinoa HOM05D000030 ORTHO05D000009 3.6e-06 55.5 105 35.2
Haze_23660 Corylus avellana HOM05D037576 ORTHO05D024911 3.6e-06 55.5 61 41.0
FAN28G0403 Fragaria x ananassa HOM05D012862 ORTHO05D014226 3.6e-06 55.5 71 36.6
Manes.03G090703 Manihot esculenta HOM05D000030 ORTHO05D000009 3.6e-06 55.5 83 34.9
Rhsim12G0123300 Rhododendron simsii HOM05D000030 ORTHO05D000009 3.6e-06 55.5 123 35.0
Hma1.2p1_0073F.1_g038490 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 4.7e-06 55.1 108 37.0
Hma1.2p1_0284F.1_g113810 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 4.7e-06 55.1 104 34.6
PSO782G4994 Papaver somniferum HOM05D013439 ORTHO05D000009 4.7e-06 55.1 99 38.4
AUR62021122 Chenopodium quinoa HOM05D000030 ORTHO05D000009 6.1e-06 54.7 103 37.9
AUR62027918 Chenopodium quinoa HOM05D000030 ORTHO05D000009 6.1e-06 54.7 104 35.6
Hma1.2p1_0081F.1_g042310 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 6.1e-06 54.7 76 40.8
Hma1.2p1_0247F.1_g101920 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 6.1e-06 54.7 97 32.0
Hma1.2p1_0851F.1_g228210 Hydrangea macrophylla HOM05D000030 ORTHO05D000009 6.1e-06 54.7 73 38.4
Lj1g0017047 Lotus japonicus HOM05D000030 ORTHO05D000009 6.1e-06 54.7 105 37.1
SHI10101 Sapria himalayana HOM05D000030 ORTHO05D000009 6.1e-06 54.7 84 38.1
Solyc09g063157.2 Solanum lycopersicum HOM05D000030 ORTHO05D000009 6.1e-06 54.7 87 31.0
CSS0049125 Camellia sinensis var. sinensis HOM05D000030 ORTHO05D000031 7.9e-06 54.3 121 32.2
Gorai.002G232100 Gossypium raimondii HOM05D000030 ORTHO05D000009 7.9e-06 54.3 81 34.6
Manes.13G073701 Manihot esculenta HOM05D000030 ORTHO05D000009 7.9e-06 54.3 95 29.5
Oeu019199.1 Olea europaea HOM05D000030 ORTHO05D000009 7.9e-06 54.3 91 35.2
TWI39G1020 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 7.9e-06 54.3 117 35.9
TWI79G1556 Tripterygium wilfordii HOM05D000030 ORTHO05D000009 7.9e-06 54.3 117 35.9


User provided reference genes

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