Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G0916 Cannabis sativa HOM05D005168 ORTHO05D006358 7.2e-62 240.4 117 100.0
Psat5g045240 Pisum sativum HOM05D005168 ORTHO05D006358 8.8e-44 180.3 117 69.2
Ca_00384_v3 Cicer arietinum L. HOM05D005168 ORTHO05D006358 5.7e-43 177.6 117 68.4
CsaV3_2G024260 Cucumis sativus L. HOM05D005168 ORTHO05D006358 5.7e-43 177.6 117 70.1
CiPaw.07G147200 Carya illinoinensis HOM05D005168 ORTHO05D006358 9.8e-43 176.8 117 70.1
Lj1g0018211 Lotus japonicus HOM05D005168 ORTHO05D006358 2.8e-42 175.3 117 69.2
Lalb_Chr11g0067001 Lupinus albus HOM05D005168 ORTHO05D006358 6.3e-42 174.1 115 70.4
Medtr3g102420 Medicago truncatula HOM05D005168 ORTHO05D006358 1.4e-41 172.9 115 69.6
QL01p031168 Quercus lobata HOM05D005168 ORTHO05D006358 1.4e-41 172.9 116 65.5
MELO3C011355.2 Cucumis melo HOM05D005168 ORTHO05D006358 1.8e-41 172.6 117 68.4
Haze_22662 Corylus avellana HOM05D005168 ORTHO05D006358 3.1e-41 171.8 117 66.7
Haze_17776 Corylus avellana HOM05D005168 ORTHO05D006358 7.0e-41 170.6 117 66.7
Sed0007604 Sechium edule HOM05D005168 ORTHO05D006358 1.2e-40 169.9 117 65.8
Cfa012889 Carpinus fangiana HOM05D005168 ORTHO05D006358 2.0e-40 169.1 117 65.8
arahy.Tifrunner.gnm1.ann1.GU7A1M Arachis hypogaea HOM05D005168 ORTHO05D006358 3.8e-39 164.9 119 65.5
Prupe.6G147400 Prunus persica HOM05D005168 ORTHO05D006358 5.0e-39 164.5 118 66.9
MD08G1010500 Malus domestica HOM05D005168 ORTHO05D006358 8.6e-39 163.7 118 65.3
arahy.Tifrunner.gnm1.ann1.TKX6L5 Arachis hypogaea HOM05D005168 ORTHO05D006358 1.5e-38 162.9 119 64.7
VMungo1080G1160 Vigna mungo HOM05D005168 ORTHO05D006358 7.2e-38 160.6 117 64.1
TWI56G1449 Tripterygium wilfordii HOM05D005168 ORTHO05D006358 1.2e-37 159.8 117 63.2
Phvul.001G175600 Phaseolus vulgaris HOM05D005168 ORTHO05D006358 2.1e-37 159.1 117 65.8
PGR031G0142 Punica granatum HOM05D005168 ORTHO05D006358 4.7e-37 157.9 117 62.4
Eucgr.C01258 Eucalyptus grandis HOM05D005168 ORTHO05D006358 1.5e-35 152.9 117 60.7
Eucgr.H00960 Eucalyptus grandis HOM05D005168 ORTHO05D006358 2.0e-35 152.5 117 59.8
Glyma.03G178900 Glycine max HOM05D005168 ORTHO05D006358 3.4e-35 151.8 118 64.4
AT3G25940 Arabidopsis thaliana HOM05D005168 ORTHO05D006358 2.2e-34 149.1 120 60.8
Aa31LG4G6030 Aethionema arabicum HOM05D005168 ORTHO05D006358 3.7e-34 148.3 121 61.2
Thhalv10019327m.g Eutrema salsugineum HOM05D005168 ORTHO05D006358 8.3e-34 147.1 120 61.7
THA.LOC104811420 Tarenaya hassleriana HOM05D005168 ORTHO05D006358 1.1e-33 146.7 121 60.3
AL5G14600 Arabidopsis lyrata HOM05D005168 ORTHO05D006358 1.8e-33 146.0 120 60.0
Thhalv10009132m.g Eutrema salsugineum HOM05D005168 ORTHO05D006358 3.1e-33 145.2 120 60.8
Manes.14G063600 Manihot esculenta HOM05D005168 ORTHO05D006358 3.1e-33 145.2 118 57.6
THA.LOC104825468 Tarenaya hassleriana HOM05D005168 ORTHO05D006358 3.1e-33 145.2 121 59.5
GSVIVG01009945001 Vitis vinifera HOM05D005168 ORTHO05D006358 3.1e-33 145.2 125 58.4
FAN23G3095 Fragaria x ananassa HOM05D005168 ORTHO05D006358 7.0e-33 144.1 118 60.2
THA.LOC104825467 Tarenaya hassleriana HOM05D005168 ORTHO05D006358 9.2e-33 143.7 121 57.9
Cpa.g.sc58.102 Carica papaya HOM05D005168 ORTHO05D006358 1.6e-32 142.9 121 58.7
Sp1g17830 Schrenkiella parvula HOM05D005168 ORTHO05D006358 1.6e-32 142.9 120 59.2
CARHR146930 Cardamine hirsuta HOM05D005168 ORTHO05D006358 2.0e-32 142.5 120 59.2
FvH4_1g24780 Fragaria vesca HOM05D005168 ORTHO05D006358 2.0e-32 142.5 115 61.7
Thecc.08G047200 Theobroma cacao HOM05D005168 ORTHO05D006358 2.0e-32 142.5 120 58.3
Atru.chr1.3654 Acer truncatum HOM05D005168 ORTHO05D006358 2.7e-32 142.1 121 58.7
Nn3g19859 Nelumbo nucifera HOM05D005168 ORTHO05D006358 2.7e-32 142.1 124 52.4
BcaB03g14336 Brassica carinata HOM05D005168 ORTHO05D006358 3.5e-32 141.7 120 58.3
BcaB03g14344 Brassica carinata HOM05D005168 ORTHO05D006358 3.5e-32 141.7 120 58.3
C07p23400 Brassica napus HOM05D005168 ORTHO05D006358 3.5e-32 141.7 120 58.3
BolC7t42872H Brassica oleracea HOM05D005168 ORTHO05D006358 3.5e-32 141.7 120 58.3
BcaB07g32021 Brassica carinata HOM05D005168 ORTHO05D006358 5.9e-32 141.0 120 57.5
CARHR020540 Cardamine hirsuta HOM05D005168 ORTHO05D006358 5.9e-32 141.0 120 58.3
Duzib093G1099 Durio zibethinus HOM05D005168 ORTHO05D006358 1.0e-31 140.2 121 59.5
BcaC05g25900 Brassica carinata HOM05D005168 ORTHO05D006358 1.3e-31 139.8 120 57.5
A07p16030 Brassica napus HOM05D005168 ORTHO05D006358 1.3e-31 139.8 120 58.3
C05p18550 Brassica napus HOM05D005168 ORTHO05D006358 1.3e-31 139.8 120 57.5
BolC5t30566H Brassica oleracea HOM05D005168 ORTHO05D006358 1.3e-31 139.8 120 57.5
BraA07t29331Z Brassica rapa HOM05D005168 ORTHO05D006358 1.3e-31 139.8 120 58.3
Potri.013G015000 Populus trichocarpa HOM05D005168 ORTHO05D006358 1.3e-31 139.8 119 56.3
BraA06t24725Z Brassica rapa HOM05D005168 ORTHO05D006358 1.7e-31 139.4 120 57.5
Carub.0005s0380 Capsella rubella HOM05D005168 ORTHO05D006358 3.8e-31 138.3 112 59.8
Os03g0711700 Oryza sativa ssp. japonica HOM05D005168 ORTHO05D006358 8.6e-31 137.1 125 53.6
A06p16200 Brassica napus HOM05D005168 ORTHO05D006358 1.5e-30 136.3 120 56.7
PSO541G4324 Papaver somniferum HOM05D005168 ORTHO05D006358 3.3e-30 135.2 124 50.8
PSO675G5410 Papaver somniferum HOM05D005168 ORTHO05D006358 3.3e-30 135.2 124 50.8
Gohir.A06G002600 Gossypium hirsutum HOM05D005168 ORTHO05D006358 5.6e-30 134.4 120 56.7
Gohir.D06G005600 Gossypium hirsutum HOM05D005168 ORTHO05D006358 5.6e-30 134.4 120 56.7
Gorai.010G002800 Gossypium raimondii HOM05D005168 ORTHO05D006358 5.6e-30 134.4 120 56.7
TAR622G0958 Trochodendron aralioides HOM05D005168 ORTHO05D006358 1.2e-29 133.3 124 50.8
SGA_v2.0_scaffold47G17500 Striga asiatica HOM05D005168 ORTHO05D006358 1.6e-29 132.9 120 52.5
SGA_v2.0_scaffold19G08553 Striga asiatica HOM05D005168 ORTHO05D006358 2.1e-29 132.5 120 52.5
CAN.G727.4 Capsicum annuum HOM05D005168 ORTHO05D006358 3.6e-29 131.7 120 55.0
Ciclev10003775m.g Citrus clementina HOM05D005168 ORTHO05D006358 8.0e-29 130.6 122 54.9
Actinidia37940 Actinidia chinensis HOM05D005168 ORTHO05D006358 1.0e-28 130.2 122 53.3
MSTRG.22344 Avicennia marina HOM05D005168 ORTHO05D006358 2.3e-28 129.0 118 52.5
Hma1.2p1_0733F.1_g210170 Hydrangea macrophylla HOM05D005168 ORTHO05D006358 3.0e-28 128.6 115 53.9
CSS0038486 Camellia sinensis var. sinensis HOM05D005168 ORTHO05D006358 5.2e-28 127.9 120 52.5
Solyc04g054510.4 Solanum lycopersicum HOM05D005168 ORTHO05D006358 5.2e-28 127.9 120 54.2
PGSC0003DMG400022038 Solanum tuberosum HOM05D005168 ORTHO05D006358 5.2e-28 127.9 120 54.2
CSS0004439 Camellia sinensis var. sinensis HOM05D005168 ORTHO05D006358 8.9e-28 127.1 122 51.6
Nitab4.5_0000337g0010 Nicotiana tabacum HOM05D005168 ORTHO05D006358 2.0e-27 125.9 120 52.5
Nitab4.5_0003251g0060 Nicotiana tabacum HOM05D005168 ORTHO05D006358 2.0e-27 125.9 120 52.5
Cc10_g01450 Coffea canephora HOM05D005168 ORTHO05D006358 4.4e-27 124.8 116 53.4
DCAR_015742 Daucus carota HOM05D005168 ORTHO05D006358 7.5e-27 124.0 120 49.2
RcHm_v2.0_Chr2g0124111 Rosa chinensis HOM05D005168 ORTHO05D006358 1.3e-26 123.2 118 54.2
Peaxi162Scf00553g00216 Petunia axillaris HOM05D005168 ORTHO05D006358 1.7e-26 122.9 120 51.7
CDE11G0347 Ceratophyllum demersum HOM05D005168 ORTHO05D006358 4.9e-26 121.3 123 44.7
ECA238G1857 Erigeron canadensis HOM05D005168 ORTHO05D006358 6.4e-26 120.9 111 49.5
vmacro04368 Vaccinium macrocarpon HOM05D005168 ORTHO05D006358 8.3e-26 120.6 118 50.8
Lsat_1_v5_gn_2_14120 Lactuca sativa HOM05D005168 ORTHO05D006358 1.9e-25 119.4 111 49.5
SalBow8G1113 Salvia bowleyana HOM05D005168 ORTHO05D006358 7.0e-25 117.5 118 47.5
Sc15g0004820 Simmondsia chinensis HOM05D005168 ORTHO05D006358 1.2e-24 116.7 125 44.0
Migut.N03173 Erythranthe guttata HOM05D005168 ORTHO05D006358 1.6e-24 116.3 118 45.8
Zm00001eb054840 Zea mays HOM05D005168 ORTHO05D006358 3.5e-24 115.2 118 50.0
Rhsim07G0250400 Rhododendron simsii HOM05D005168 ORTHO05D006358 4.6e-24 114.8 116 49.1
HanXRQChr04g0101211 Helianthus annuus HOM05D005168 ORTHO05D006358 6.0e-24 114.4 111 48.6
EL10Ac1g02165 Beta vulgaris HOM05D005168 ORTHO05D006358 2.5e-22 109.0 125 40.8
Hund09202 Selenicereus undatus HOM05D005168 ORTHO05D006358 3.3e-22 108.6 125 41.6
Sabra13G0016900 Salix brachista HOM05D005168 ORTHO05D006358 4.3e-22 108.2 97 53.6
unitig_22.g6797 Utricularia gibba HOM05D005168 ORTHO05D006358 1.2e-21 106.7 118 45.8
Mapoly0043s0107 Marchantia polymorpha HOM05D005168 ORTHO05D006358 1.6e-21 106.3 124 44.4
Sabra13G0012900 Salix brachista HOM05D005168 ORTHO05D006358 2.1e-21 105.9 95 53.7
Sopen04g024330 Solanum pennellii HOM05D005168 ORTHO05D006358 2.1e-21 105.9 107 51.4
TPR.G9182 Trifolium pratense HOM05D005168 ORTHO05D006358 4.0e-20 101.7 80 62.5
AagrBONN_evm.TU.Sc2ySwM_368.3393 Anthoceros agrestis HOM05D005168 ORTHO05D006358 8.9e-20 100.5 119 41.2
Aqoxy2G01931 Aquilegia oxysepala HOM05D005168 ORTHO05D006358 2.0e-19 99.4 122 41.8
Dinv40488 Davidia involucrata HOM05D005168 ORTHO05D006358 2.6e-19 99.0 96 52.1
Eucgr.L01842 Eucalyptus grandis HOM05D005168 ORTHO05D006358 3.7e-18 95.1 74 55.4
FAN26G0870 Fragaria x ananassa HOM05D005168 ORTHO05D006358 6.4e-18 94.4 69 66.7
SEGI_04309 Sequoiadendron giganteum HOM05D005168 ORTHO05D006358 4.1e-17 91.7 123 37.4
Eucgr.F02832 Eucalyptus grandis HOM05D005168 ORTHO05D006358 1.6e-16 89.7 78 53.8
SMO351G0141 Selaginella moellendorffii HOM05D005168 ORTHO05D006358 1.6e-16 89.7 109 41.3
AL1G32870 Arabidopsis lyrata HOM05D005168 ORTHO05D006358 1.7e-15 86.3 67 58.2
AT1G20065 Arabidopsis thaliana HOM05D005168 ORTHO05D006358 3.0e-15 85.5 63 58.7
Glyma.17G201200 Glycine max HOM05D005168 ORTHO05D006358 8.6e-15 84.0 115 47.8
Pp3c24_7070 Physcomitrium patens HOM05D005168 ORTHO05D006358 8.6e-15 84.0 154 31.8
Glyma.06G213500 Glycine max HOM05D005168 ORTHO05D006358 1.9e-14 82.8 65 66.2
HPP92_028162 Vanilla planifolia HOM05D005168 ORTHO05D006358 1.9e-14 82.8 89 44.9
Glyma.08G301902 Glycine max HOM05D005168 ORTHO05D006358 2.5e-14 82.4 115 47.0
Glyma.08G246200 Glycine max HOM05D005168 ORTHO05D006358 3.3e-14 82.0 49 75.5
MD15G1010600 Malus domestica HOM05D005168 ORTHO05D006358 9.5e-14 80.5 54 63.0
Ca_15982_v3 Cicer arietinum L. HOM05D005168 ORTHO05D006358 1.2e-13 80.1 53 62.3
Glyma.11G172400 Glycine max HOM05D005168 ORTHO05D006358 1.6e-13 79.7 67 62.7
ATR0057G015 Amborella trichopoda HOM05D005168 ORTHO05D006358 6.2e-13 77.8 86 41.9
ClCG08G014180 Citrullus lanatus HOM05D005168 ORTHO05D006358 4.0e-12 75.1 57 61.4
BcaC05g25904 Brassica carinata HOM05D005168 ORTHO05D006358 1.5e-11 73.2 87 47.1
Cre01.g018000 Chlamydomonas reinhardtii HOM05D005168 ORTHO05D006358 2.0e-11 72.8 122 34.4
Aqoxy6G02286 Aquilegia oxysepala HOM05D005168 ORTHO05D006358 2.6e-11 72.4 108 36.1
THA.LOC109116732 Tarenaya hassleriana HOM05D005168 ORTHO05D006358 2.6e-11 72.4 53 58.5
Glyma.19G179600 Glycine max HOM05D005168 ORTHO05D006358 4.4e-11 71.6 69 49.3
arahy.Tifrunner.gnm1.ann1.BQ9Q0E Arachis hypogaea HOM05D005168 ORTHO05D006358 2.9e-10 68.9 55 58.2
CDE09G0329 Ceratophyllum demersum HOM05D005168 ORTHO05D006358 3.2e-09 65.5 76 43.4
CBR_g23850 Chara braunii HOM05D005168 ORTHO05D006358 9.2e-09 63.9 58 46.6
ClCG08G014170 Citrullus lanatus HOM05D005168 ORTHO05D006358 1.2e-08 63.5 40 65.0
MCO15G369 Micromonas commoda HOM05D005168 ORTHO05D006358 2.3e-07 59.3 130 31.5
SGA_v2.0_scaffold22G09953 Striga asiatica HOM05D006029 ORTHO05D007439 3.9e-07 58.5 118 34.7
SHI17132 Sapria himalayana HOM05D005168 ORTHO05D006358 1.5e-06 56.6 49 49.0
Cfa010653 Carpinus fangiana HOM05D006029 ORTHO05D007439 7.3e-06 54.3 124 30.6


User provided reference genes

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