Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G0575 Cannabis sativa HOM05D004177 ORTHO05D004826 1.8e-212 742.3 362 100.0
THA.LOC104826863 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 2.5e-185 652.1 354 86.7
Sabra03G0136900 Salix brachista HOM05D004177 ORTHO05D004826 9.3e-185 650.2 354 87.0
THA.LOC104816571 Tarenaya hassleriana HOM05D004177 ORTHO05D004826 1.2e-184 649.8 358 85.2
Potri.003G186900 Populus trichocarpa HOM05D004177 ORTHO05D004826 2.7e-184 648.7 354 86.4
Prupe.7G214500 Prunus persica HOM05D004177 ORTHO05D004826 3.5e-184 648.3 356 85.4
Cfa003130 Carpinus fangiana HOM05D004177 ORTHO05D004826 1.3e-183 646.4 353 86.1
CiPaw.03G219400 Carya illinoinensis HOM05D004177 ORTHO05D004826 2.3e-183 645.6 353 85.0
PGR142G0935 Punica granatum HOM05D004177 ORTHO05D004826 3.0e-183 645.2 354 85.0
arahy.Tifrunner.gnm1.ann1.H1EJ8W Arachis hypogaea HOM05D004177 ORTHO05D004826 5.1e-183 644.4 357 84.3
arahy.Tifrunner.gnm1.ann1.TIR1N2 Arachis hypogaea HOM05D004177 ORTHO05D004826 5.1e-183 644.4 357 84.3
MD15G1202800 Malus domestica HOM05D004177 ORTHO05D004826 5.1e-183 644.4 354 84.5
QL02p063435 Quercus lobata HOM05D004177 ORTHO05D004826 5.1e-183 644.4 357 84.0
CsaV3_5G024780 Cucumis sativus L. HOM05D004177 ORTHO05D004826 6.7e-183 644.0 356 84.0
Manes.15G104600 Manihot esculenta HOM05D004177 ORTHO05D004826 6.7e-183 644.0 353 86.7
MELO3C005126.2 Cucumis melo HOM05D004177 ORTHO05D004826 1.5e-182 642.9 358 83.8
Duzib114G0142 Durio zibethinus HOM05D004177 ORTHO05D004826 1.9e-182 642.5 353 83.9
Psat7g081120 Pisum sativum HOM05D004177 ORTHO05D004826 1.9e-182 642.5 358 83.5
Ciclev10008698m.g Citrus clementina HOM05D004177 ORTHO05D004826 2.5e-182 642.1 357 83.5
BcaC06g32302 Brassica carinata HOM05D004177 ORTHO05D004826 3.3e-182 641.7 359 83.8
C09p70810 Brassica napus HOM05D004177 ORTHO05D004826 3.3e-182 641.7 359 83.8
AT5G05920 Arabidopsis thaliana HOM05D004177 ORTHO05D004826 4.3e-182 641.3 359 83.6
Glyma.07G127600 Glycine max HOM05D004177 ORTHO05D004826 5.7e-182 641.0 357 83.5
Nn6g35409 Nelumbo nucifera HOM05D004177 ORTHO05D004826 1.3e-181 639.8 359 82.2
Sp6g36980 Schrenkiella parvula HOM05D004177 ORTHO05D004826 1.3e-181 639.8 359 83.6
Thecc.10G003500 Theobroma cacao HOM05D004177 ORTHO05D004826 3.7e-181 638.3 358 83.2
Hma1.2p1_1074F.1_g254310 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 6.3e-181 637.5 354 84.7
Hma1.2p1_0663F.1_g198701 Hydrangea macrophylla HOM05D004177 ORTHO05D004826 8.2e-181 637.1 354 83.9
ClCG01G007700 Citrullus lanatus HOM05D004177 ORTHO05D004826 1.1e-180 636.7 368 81.5
Thhalv10013870m.g Eutrema salsugineum HOM05D004177 ORTHO05D004826 2.4e-180 635.6 354 84.2
Lalb_Chr24g0393931 Lupinus albus HOM05D004177 ORTHO05D004826 3.1e-180 635.2 352 83.8
MD02G1073000 Malus domestica HOM05D004177 ORTHO05D004826 3.1e-180 635.2 354 83.6
TWI09G1015 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 3.1e-180 635.2 356 82.0
VMungo0464G2175 Vigna mungo HOM05D004177 ORTHO05D004826 3.1e-180 635.2 357 82.6
Atru.chr7.1532 Acer truncatum HOM05D004177 ORTHO05D004826 4.1e-180 634.8 354 83.3
Gohir.D10G201600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 5.3e-180 634.4 354 83.1
Ca_18171_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 6.9e-180 634.0 354 82.5
Eucgr.C00926 Eucalyptus grandis HOM05D004177 ORTHO05D004826 6.9e-180 634.0 353 84.7
Actinidia25277 Actinidia chinensis HOM05D004177 ORTHO05D004826 9.0e-180 633.6 354 82.5
A10p30370 Brassica napus HOM05D004177 ORTHO05D004826 9.0e-180 633.6 360 83.1
Phvul.004G172700 Phaseolus vulgaris HOM05D004177 ORTHO05D004826 9.0e-180 633.6 357 82.6
AL6G15840 Arabidopsis lyrata HOM05D004177 ORTHO05D004826 1.2e-179 633.3 354 83.6
Rhsim03G0234600 Rhododendron simsii HOM05D004177 ORTHO05D004826 1.2e-179 633.3 355 84.5
Gorai.011G226400 Gossypium raimondii HOM05D004177 ORTHO05D004826 1.5e-179 632.9 354 83.3
Aqoxy2G03855 Aquilegia oxysepala HOM05D004177 ORTHO05D004826 2.0e-179 632.5 354 82.5
TAR636G0014 Trochodendron aralioides HOM05D004177 ORTHO05D004826 2.0e-179 632.5 359 83.6
CiPaw.12G022300 Carya illinoinensis HOM05D004177 ORTHO05D004826 2.6e-179 632.1 356 83.7
Gohir.D10G201700 Gossypium hirsutum HOM05D004177 ORTHO05D004826 2.6e-179 632.1 354 83.3
Gorai.011G226300 Gossypium raimondii HOM05D004177 ORTHO05D004826 2.6e-179 632.1 354 82.5
Ah.09g228420 Amaranthus hybridus HOM05D004177 ORTHO05D004826 3.4e-179 631.7 358 82.1
Actinidia29891 Actinidia chinensis HOM05D004177 ORTHO05D004826 7.6e-179 630.6 353 83.3
GSVIVG01008468001 Vitis vinifera HOM05D004177 ORTHO05D004826 7.6e-179 630.6 354 83.6
Dinv36734 Davidia involucrata HOM05D004177 ORTHO05D004826 1.3e-178 629.8 354 83.9
Sed0022999 Sechium edule HOM05D004177 ORTHO05D004826 1.3e-178 629.8 358 82.7
Aa31LG11G6950 Aethionema arabicum HOM05D004177 ORTHO05D004826 2.2e-178 629.0 355 83.1
MBI04_g06223_MAGBIO Magnolia biondii HOM05D004177 ORTHO05D004826 2.2e-178 629.0 366 80.1
Cc06_g10990 Coffea canephora HOM05D004177 ORTHO05D004826 2.9e-178 628.6 352 83.8
vmacro00113 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 5.0e-178 627.9 354 84.2
AUR62007842 Chenopodium quinoa HOM05D004177 ORTHO05D004826 8.5e-178 627.1 358 80.4
AUR62003036 Chenopodium quinoa HOM05D004177 ORTHO05D004826 1.1e-177 626.7 358 80.7
BolC9t59847H Brassica oleracea HOM05D004177 ORTHO05D004826 1.9e-177 625.9 380 78.7
RcHm_v2.0_Chr2g0092611 Rosa chinensis HOM05D004177 ORTHO05D004826 3.2e-177 625.2 352 82.1
TPR.G38463 Trifolium pratense HOM05D004177 ORTHO05D004826 3.2e-177 625.2 358 81.3
Gohir.A10G194600 Gossypium hirsutum HOM05D004177 ORTHO05D004826 4.2e-177 624.8 354 82.5
BraA10t45083Z Brassica rapa HOM05D004177 ORTHO05D004826 5.5e-177 624.4 373 79.6
BcaB05g21688 Brassica carinata HOM05D004177 ORTHO05D004826 9.3e-177 623.6 359 81.9
FvH4_1g06830 Fragaria vesca HOM05D004177 ORTHO05D004826 9.3e-177 623.6 360 80.6
HanXRQChr09g0263461 Helianthus annuus HOM05D004177 ORTHO05D004826 2.1e-176 622.5 358 81.0
Sc14g0000820 Simmondsia chinensis HOM05D004177 ORTHO05D004826 2.1e-176 622.5 354 81.9
BolC2t06219H Brassica oleracea HOM05D004177 ORTHO05D004826 4.6e-176 621.3 358 82.4
AUR62027470 Chenopodium quinoa HOM05D004177 ORTHO05D004826 4.6e-176 621.3 358 80.4
Lj1g0019759 Lotus japonicus HOM05D004177 ORTHO05D004826 1.3e-175 619.8 359 81.3
SalBow6G4427 Salvia bowleyana HOM05D004177 ORTHO05D004826 2.3e-175 619.0 353 81.3
ECA233G2252 Erigeron canadensis HOM05D004177 ORTHO05D004826 1.1e-174 616.7 357 80.4
Carub.0006s0480 Capsella rubella HOM05D004177 ORTHO05D004826 2.5e-174 615.5 354 80.8
PSO210G0074 Papaver somniferum HOM05D004177 ORTHO05D004826 2.5e-174 615.5 354 82.5
MSTRG.19533 Avicennia marina HOM05D004177 ORTHO05D004826 3.7e-173 611.7 355 80.6
Lsat_1_v5_gn_8_88081 Lactuca sativa HOM05D004177 ORTHO05D004826 1.4e-172 609.8 353 79.3
PSO210G7296 Papaver somniferum HOM05D004177 ORTHO05D004826 2.4e-172 609.0 354 81.1
Sopen02g025490 Solanum pennellii HOM05D004177 ORTHO05D004826 2.4e-172 609.0 363 78.0
BraA02t04865Z Brassica rapa HOM05D004177 ORTHO05D004826 4.1e-172 608.2 366 79.5
SGA_v2.0_scaffold62G21577 Striga asiatica HOM05D004177 ORTHO05D004826 5.3e-172 607.8 353 80.2
Solyc02g080800.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 6.9e-172 607.4 365 77.5
TPR.G9556 Trifolium pratense HOM05D004177 ORTHO05D004826 9.0e-172 607.1 359 79.4
Ca_14076_v3 Cicer arietinum L. HOM05D004177 ORTHO05D004826 1.2e-171 606.7 354 79.9
Migut.J00439 Erythranthe guttata HOM05D004177 ORTHO05D004826 1.5e-171 606.3 351 79.8
HanXRQChr04g0112631 Helianthus annuus HOM05D004177 ORTHO05D004826 5.9e-171 604.4 354 79.9
FAN28G1160 Fragaria x ananassa HOM05D004177 ORTHO05D004826 1.7e-170 602.8 372 77.7
FAN26G2529 Fragaria x ananassa HOM05D004177 ORTHO05D004826 8.5e-170 600.5 371 77.6
ECA236G1557 Erigeron canadensis HOM05D004177 ORTHO05D004826 1.9e-169 599.4 354 78.5
SHI02807 Sapria himalayana HOM05D004177 ORTHO05D004826 1.9e-169 599.4 368 75.8
CAN.G1014.11 Capsicum annuum HOM05D004177 ORTHO05D004826 5.5e-169 597.8 361 78.4
Lsat_1_v5_gn_8_88021 Lactuca sativa HOM05D004177 ORTHO05D004826 5.5e-169 597.8 353 77.3
DCAR_012005 Daucus carota HOM05D004177 ORTHO05D004826 2.1e-168 595.9 352 81.2
Oeu052128.1 Olea europaea HOM05D004177 ORTHO05D004826 3.6e-168 595.1 340 81.2
CSS0022162 Camellia sinensis var. sinensis HOM05D004177 ORTHO05D004826 1.8e-167 592.8 372 76.1
Nitab4.5_0002695g0050 Nicotiana tabacum HOM05D004177 ORTHO05D004826 6.7e-167 590.9 369 76.2
Nitab4.5_0007963g0020 Nicotiana tabacum HOM05D004177 ORTHO05D004826 5.7e-166 587.8 375 74.4
Haze_25874 Corylus avellana HOM05D004177 ORTHO05D004826 4.8e-165 584.7 373 75.3
HPP92_011031 Vanilla planifolia HOM05D004177 ORTHO05D004826 5.3e-164 581.3 353 77.9
ATR0789G091 Amborella trichopoda HOM05D004177 ORTHO05D004826 1.2e-163 580.1 357 75.6
PSO596G0001 Papaver somniferum HOM05D004177 ORTHO05D004826 1.2e-163 580.1 356 75.0
Solyc02g080790.4 Solanum lycopersicum HOM05D004177 ORTHO05D004826 1.5e-163 579.7 363 75.2
Cpa.g.sc19.251 Carica papaya HOM05D004177 ORTHO05D004826 1.0e-162 577.0 355 78.0
Sopen02g025480 Solanum pennellii HOM05D004177 ORTHO05D004826 1.0e-162 577.0 363 74.9
EL10Ac6g14643 Beta vulgaris HOM05D004177 ORTHO05D004826 1.4e-161 573.2 352 76.4
unitig_27.g24734 Utricularia gibba HOM05D001806 ORTHO05D004826 1.2e-160 570.1 343 77.6
COL.COLO4_19342 Corchorus olitorius HOM05D004177 ORTHO05D004826 2.1e-160 569.3 353 77.3
SEGI_08410 Sequoiadendron giganteum HOM05D004177 ORTHO05D004826 2.7e-160 568.9 350 74.6
HPP92_001732 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.7e-157 559.7 351 75.8
Os03g0740600 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 2.2e-157 559.3 354 74.6
HPP92_014582 Vanilla planifolia HOM05D004177 ORTHO05D004826 4.8e-157 558.1 351 74.6
Mapoly0001s0219 Marchantia polymorpha HOM05D004177 ORTHO05D004826 2.4e-156 555.8 348 73.6
Gohir.A10G194500 Gossypium hirsutum HOM05D004177 ORTHO05D004826 1.2e-155 553.5 354 74.9
SMO337G0022 Selaginella moellendorffii HOM05D004177 ORTHO05D004826 7.7e-155 550.8 353 72.5
AUR62031232 Chenopodium quinoa HOM05D004177 ORTHO05D004826 1.0e-154 550.4 361 72.9
FAN19G3030 Fragaria x ananassa HOM05D004177 ORTHO05D004826 1.0e-154 550.4 360 73.9
FAN23G1990 Fragaria x ananassa HOM05D004177 ORTHO05D004826 5.0e-154 548.1 360 73.1
Pp3c2_9490 Physcomitrium patens HOM05D004177 ORTHO05D004826 1.9e-153 546.2 346 72.8
AagrBONN_evm.TU.Sc2ySwM_344.1392 Anthoceros agrestis HOM05D004177 ORTHO05D004826 4.7e-152 541.6 338 74.3
CARHR207300 Cardamine hirsuta HOM05D004177 ORTHO05D004826 8.0e-152 540.8 292 86.0
vmacro06273 Vaccinium macrocarpon HOM05D004177 ORTHO05D004826 8.8e-151 537.3 427 64.6
FAN26G0736 Fragaria x ananassa HOM05D004177 ORTHO05D004826 1.5e-150 536.6 368 71.7
Zm00001eb215220 Zea mays HOM05D004177 ORTHO05D004826 4.4e-150 535.0 354 72.9
Zm00001eb085620 Zea mays HOM05D004177 ORTHO05D004826 8.2e-149 530.8 371 69.5
TWI12G1142 Tripterygium wilfordii HOM05D004177 ORTHO05D004826 1.5e-145 520.0 278 86.3
MELO3C025268.2 Cucumis melo HOM05D004177 ORTHO05D004826 1.6e-144 516.5 356 70.2
AagrBONN_evm.TU.Sc2ySwM_344.3440 Anthoceros agrestis HOM05D004177 ORTHO05D004826 4.0e-143 511.9 389 63.5
HPP92_016636 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.4e-135 486.9 290 78.3
PRCOL_00001978 Prasinoderma coloniale HOM05D004177 ORTHO05D004826 2.0e-134 483.0 350 64.0
MCO16G096 Micromonas commoda HOM05D004177 ORTHO05D004826 3.1e-132 475.7 349 63.9
CDE04G2922 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 8.0e-128 461.1 357 62.7
Dinv42291 Davidia involucrata HOM05D004177 ORTHO05D004826 1.4e-127 460.3 237 89.0
Cre08.g369800 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 8.9e-127 457.6 331 62.2
Cre01.g018950 Chlamydomonas reinhardtii HOM05D004177 ORTHO05D004826 9.8e-126 454.1 312 67.6
Peaxi162Scf00178g01719 Petunia axillaris HOM05D004177 ORTHO05D004826 2.0e-123 446.4 711 39.0
Sed0017389 Sechium edule HOM05D004177 ORTHO05D004826 2.6e-118 429.5 267 75.3
Haze_27186 Corylus avellana HOM05D004177 ORTHO05D004826 5.6e-113 411.8 350 56.0
Nn4g24829 Nelumbo nucifera HOM05D004177 ORTHO05D004826 9.9e-110 401.0 241 76.3
Os09g0421100 Oryza sativa ssp. japonica HOM05D004177 ORTHO05D004826 4.1e-100 369.0 334 57.5
AagrBONN_evm.TU.Sc2ySwM_362.473 Anthoceros agrestis HOM05D004177 ORTHO05D004826 1.7e-98 363.6 338 56.8
SGA_v2.0_scaffold439G51649 Striga asiatica HOM05D004177 ORTHO05D004826 5.2e-95 352.1 219 75.8
CBR_g31495 Chara braunii HOM05D004177 ORTHO05D004826 2.4e-92 343.2 248 62.9
SGA_v2.0_scaffold439G51638 Striga asiatica HOM05D004177 ORTHO05D004826 1.3e-85 320.9 202 75.2
Hund18418 Selenicereus undatus HOM05D004177 ORTHO05D004826 5.1e-82 308.9 291 56.4
CAN.G744.9 Capsicum annuum HOM05D004177 ORTHO05D004826 4.4e-49 199.5 133 75.2
HanXRQChr04g0126441 Helianthus annuus HOM05D004177 ORTHO05D004826 4.1e-47 193.0 100 90.0
HanXRQChr13g0409461 Helianthus annuus HOM05D004177 ORTHO05D004826 1.7e-45 187.6 116 81.9
Oeu062209.1 Olea europaea HOM05D004177 ORTHO05D004826 6.5e-45 185.7 124 74.2
Oeu062208.1 Olea europaea HOM05D004177 ORTHO05D004826 1.1e-44 184.9 124 73.4
Oeu062213.1 Olea europaea HOM05D004177 ORTHO05D004826 2.5e-44 183.7 123 74.0
AagrBONN_evm.TU.Sc2ySwM_117.1724 Anthoceros agrestis HOM05D004177 ORTHO05D004826 1.2e-43 181.4 171 54.4
Oeu062211.1 Olea europaea HOM05D004177 ORTHO05D004826 1.1e-41 174.9 123 69.9
C02p02540 Brassica napus HOM05D001260 ORTHO05D002424 5.7e-41 172.6 129 66.7
Actinidia03786 Actinidia chinensis HOM05D004177 ORTHO05D004826 6.3e-40 169.1 95 85.3
Hund18419 Selenicereus undatus HOM05D004177 ORTHO05D004826 1.8e-39 167.5 115 71.3
HPP92_016662 Vanilla planifolia HOM05D004177 ORTHO05D004826 6.5e-37 159.1 98 71.4
Aa31sc206G30 Aethionema arabicum HOM05D005780 ORTHO05D004826 2.2e-32 144.1 125 59.2
HPP92_016663 Vanilla planifolia HOM05D004177 ORTHO05D004826 1.8e-31 141.0 111 64.9
Oeu039826.4 Olea europaea HOM05D002851 ORTHO05D003084 9.8e-25 118.6 69 78.3
RcHm_v2.0_Chr6g0296851 Rosa chinensis HOM05D004177 ORTHO05D004826 1.1e-23 115.2 64 85.9
Actinidia39745 Actinidia chinensis HOM05D004177 ORTHO05D004826 4.1e-23 113.2 65 80.0
Oeu056107.1 Olea europaea HOM05D004177 ORTHO05D004826 2.0e-22 110.9 70 75.7
AUR62030112 Chenopodium quinoa HOM05D004177 ORTHO05D004826 1.0e-18 98.6 57 80.7
CDE02G3953 Ceratophyllum demersum HOM05D004177 ORTHO05D004826 3.7e-16 90.1 66 57.6
Nn4g24830 Nelumbo nucifera HOM05D004177 ORTHO05D004826 1.4e-15 88.2 125 44.8
Peaxi162Scf00287g00176 Petunia axillaris HOM05D004177 ORTHO05D004826 1.4e-15 88.2 84 53.6
Pp3c1_32420 Physcomitrium patens HOM05D004177 ORTHO05D004826 1.5e-12 78.2 46 73.9
HanXRQChr13g0409471 Helianthus annuus HOM05D004177 ORTHO05D004826 9.5e-12 75.5 62 56.5
Medtr8g079080 Medicago truncatula HOM05D004177 ORTHO05D004826 3.7e-08 63.5 41 70.7
VMungo0647G1164 Vigna mungo HOM05D004177 ORTHO05D004826 4.6e-06 56.6 31 83.9


User provided reference genes

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