Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G0281 Cannabis sativa HOM05D006512 ORTHO05D008027 0.0e+00 1479.5 898 100.0
Haze_09710 Corylus avellana HOM05D006512 ORTHO05D008027 4.6e-217 758.8 912 57.3
Prupe.4G218000 Prunus persica HOM05D006512 ORTHO05D008027 1.0e-211 741.1 943 55.7
CiPaw.12G131800 Carya illinoinensis HOM05D006512 ORTHO05D008027 8.2e-190 668.3 907 53.9
TWI39G1152 Tripterygium wilfordii HOM05D006512 ORTHO05D008027 3.5e-180 636.3 917 50.9
FAN11G0896 Fragaria x ananassa HOM05D006512 ORTHO05D008027 1.5e-175 620.9 924 51.9
Duzib213G0172 Durio zibethinus HOM05D006512 ORTHO05D008027 8.5e-171 605.1 945 48.5
Atru.chr2.3489 Acer truncatum HOM05D006512 ORTHO05D008027 5.5e-170 602.4 927 50.5
RcHm_v2.0_Chr5g0040811 Rosa chinensis HOM05D006512 ORTHO05D008027 4.0e-168 596.3 949 50.2
CSS0043474 Camellia sinensis var. sinensis HOM05D006512 ORTHO05D008027 3.4e-167 593.2 991 48.0
FAN21G3399 Fragaria x ananassa HOM05D006512 ORTHO05D008027 1.3e-166 591.3 948 50.4
Sabra16G0234800 Salix brachista HOM05D006512 ORTHO05D008027 3.7e-166 589.7 965 46.7
Gohir.D05G372700 Gossypium hirsutum HOM05D006512 ORTHO05D008027 7.0e-165 585.5 939 49.2
Thecc.07G032200 Theobroma cacao HOM05D006512 ORTHO05D008027 2.7e-164 583.6 930 53.2
Ciclev10007420m.g Citrus clementina HOM05D006512 ORTHO05D008027 5.9e-164 582.4 924 50.8
Glyma.14G021200 Glycine max HOM05D006512 ORTHO05D008027 2.5e-162 577.0 932 49.5
VMungo0647G0540 Vigna mungo HOM05D006512 ORTHO05D008027 2.8e-161 573.5 919 50.1
Glyma.02G293200 Glycine max HOM05D006512 ORTHO05D008027 3.6e-161 573.2 920 51.0
FAN16G2871 Fragaria x ananassa HOM05D006512 ORTHO05D008027 1.0e-160 571.6 930 49.5
FAN25G2516 Fragaria x ananassa HOM05D006512 ORTHO05D008027 5.2e-160 569.3 949 50.1
TPR.G1164 Trifolium pratense HOM05D006512 ORTHO05D008027 3.7e-158 563.1 931 50.2
arahy.Tifrunner.gnm1.ann1.WH2E03 Arachis hypogaea HOM05D006512 ORTHO05D008027 7.8e-156 555.4 704 50.1
FAN25G1139 Fragaria x ananassa HOM05D006512 ORTHO05D008027 1.3e-155 554.7 746 51.3
arahy.Tifrunner.gnm1.ann1.DSL29X Arachis hypogaea HOM05D006512 ORTHO05D008027 2.9e-155 553.5 925 50.1
Actinidia32260 Actinidia chinensis HOM05D006512 ORTHO05D008027 8.6e-155 552.0 929 48.2
Lj1C877G6 Lonicera japonica HOM05D006512 ORTHO05D008027 6.4e-150 535.8 959 44.7
Medtr5g093560 Medicago truncatula HOM05D006512 ORTHO05D008027 1.8e-149 534.3 946 48.7
Cpa.g.sc12.276 Carica papaya HOM05D006512 ORTHO05D008027 5.4e-149 532.7 570 55.8
QL08p009135 Quercus lobata HOM05D006512 ORTHO05D008027 9.2e-149 531.9 779 53.7
vmacro02216 Vaccinium macrocarpon HOM05D006512 ORTHO05D008027 4.7e-145 519.6 986 46.7
PGR083G0988 Punica granatum HOM05D006512 ORTHO05D008027 2.3e-139 500.7 538 53.7
PSO541G1419 Papaver somniferum HOM05D006512 ORTHO05D008027 2.1e-137 494.2 937 41.9
EL10Ac4g07766 Beta vulgaris HOM05D006512 ORTHO05D008027 1.1e-136 491.9 935 47.4
Nitab4.5_0001393g0060 Nicotiana tabacum HOM05D006512 ORTHO05D008027 9.9e-135 485.3 1037 44.4
TAR626G0449 Trochodendron aralioides HOM05D006512 ORTHO05D008027 2.4e-133 480.7 949 43.1
Nitab4.5_0004829g0090 Nicotiana tabacum HOM05D006512 ORTHO05D008027 1.2e-132 478.4 698 46.1
Ah.06g182620 Amaranthus hybridus HOM05D006512 ORTHO05D008027 2.1e-132 477.6 932 44.6
FvH4_3g23160 Fragaria vesca HOM05D006512 ORTHO05D008027 5.1e-131 473.0 780 50.6
THA.LOC104811621 Tarenaya hassleriana HOM05D006512 ORTHO05D008027 8.6e-131 472.2 676 47.0
Oeu024915.1 Olea europaea HOM05D006512 ORTHO05D008027 5.6e-130 469.5 916 40.7
Hund23227 Selenicereus undatus HOM05D006512 ORTHO05D008027 7.3e-130 469.2 1020 42.4
Peaxi162Scf01615g00010 Petunia axillaris HOM05D006512 ORTHO05D008027 1.2e-129 468.4 993 44.1
Nn1g07218 Nelumbo nucifera HOM05D006512 ORTHO05D008027 1.6e-129 468.0 838 41.9
COL.COLO4_09692 Corchorus olitorius HOM05D006512 ORTHO05D008027 3.6e-129 466.8 571 50.1
CAN.G492.3 Capsicum annuum HOM05D006512 ORTHO05D008027 1.8e-128 464.5 1002 43.5
AUR62020400 Chenopodium quinoa HOM05D006512 ORTHO05D008027 5.2e-128 463.0 945 43.8
ECA236G0056 Erigeron canadensis HOM05D006512 ORTHO05D008027 2.0e-127 461.1 949 43.8
Potri.001G356800 Populus trichocarpa HOM05D006512 ORTHO05D008027 2.6e-127 460.7 826 48.5
MD11G1213200 Malus domestica HOM05D006512 ORTHO05D008027 3.4e-127 460.3 727 53.5
Sopen10g002210 Solanum pennellii HOM05D006512 ORTHO05D008027 1.1e-125 455.3 996 42.8
AUR62015819 Chenopodium quinoa HOM05D006512 ORTHO05D008027 1.4e-125 454.9 966 41.0
Phvul.008G270300 Phaseolus vulgaris HOM05D006512 ORTHO05D008027 7.3e-122 442.6 839 47.4
Manes.03G133700 Manihot esculenta HOM05D006512 ORTHO05D008027 3.6e-121 440.3 778 48.7
PGSC0003DMG400014387 Solanum tuberosum HOM05D006512 ORTHO05D008027 4.7e-121 439.9 996 43.2
Duzib170G0430 Durio zibethinus HOM05D006512 ORTHO05D008027 1.8e-120 438.0 772 48.8
Gorai.009G441100 Gossypium raimondii HOM05D006512 ORTHO05D008027 4.0e-120 436.8 792 47.6
Carub.0008s1539 Capsella rubella HOM05D006512 ORTHO05D008027 6.4e-118 429.5 730 42.1
MBI07_g09094_MAGBIO Magnolia biondii HOM05D006512 ORTHO05D008027 2.4e-117 427.6 597 46.6
Oeu041836.1 Olea europaea HOM05D006512 ORTHO05D008027 1.7e-115 421.4 829 44.4
DCAR_022584 Daucus carota HOM05D006512 ORTHO05D008027 1.4e-112 411.8 978 41.6
Aqoxy1G03389_Aqoxy1G03390 Aquilegia oxysepala HOM05D006512 ORTHO05D008027 4.0e-112 410.2 747 40.7
CSS0048002 Camellia sinensis var. sinensis HOM05D006512 ORTHO05D008027 6.9e-112 409.5 845 45.4
Gohir.A04G013500 Gossypium hirsutum HOM05D006512 ORTHO05D008027 9.0e-112 409.1 575 49.6
Ca_06341_v3 Cicer arietinum L. HOM05D006512 ORTHO05D008027 4.5e-111 406.8 768 49.6
A02p09890 Brassica napus HOM05D006512 ORTHO05D008027 7.6e-111 406.0 691 41.8
Migut.H01809 Erythranthe guttata HOM05D006512 ORTHO05D008027 9.9e-111 405.6 697 40.7
AL8G30600 Arabidopsis lyrata HOM05D006512 ORTHO05D008027 1.7e-110 404.8 846 39.7
Lsat_1_v5_gn_7_111120 Lactuca sativa HOM05D006512 ORTHO05D008027 3.8e-110 403.7 914 38.4
Aa31LG5G12080 Aethionema arabicum HOM05D006512 ORTHO05D008027 4.2e-109 400.2 722 41.1
Thhalv10015403m.g Eutrema salsugineum HOM05D006512 ORTHO05D008027 9.3e-109 399.1 697 40.3
C02p16450 Brassica napus HOM05D006512 ORTHO05D008027 1.2e-108 398.7 679 41.1
BcaC03g14267 Brassica carinata HOM05D006512 ORTHO05D008027 3.5e-108 397.1 679 40.9
LjContig00272g0012578 Lotus japonicus HOM05D006512 ORTHO05D008027 2.0e-103 381.3 791 46.8
BraA02t06053Z Brassica rapa HOM05D006512 ORTHO05D008027 2.6e-103 380.9 761 39.9
BolC2t07744H Brassica oleracea HOM05D006512 ORTHO05D008027 5.8e-103 379.8 945 41.8
BcaB05g22180 Brassica carinata HOM05D006512 ORTHO05D008027 4.2e-101 373.6 919 39.3
PSO675G4144 Papaver somniferum HOM05D006512 ORTHO05D008027 2.7e-100 370.9 624 42.1
SGA_v2.0_scaffold172G39010 Striga asiatica HOM05D006512 ORTHO05D008027 2.3e-99 367.9 985 38.0
Sc03g0008470 Simmondsia chinensis HOM05D006512 ORTHO05D008027 1.5e-98 365.2 762 45.3
unitig_899.g15285 Utricularia gibba HOM05D006512 ORTHO05D008027 9.3e-93 345.9 765 36.6
HPP92_009832 Vanilla planifolia HOM05D006512 ORTHO05D008027 7.9e-92 342.8 789 36.9
Eucgr.F00738 Eucalyptus grandis HOM05D006512 ORTHO05D008027 9.7e-90 335.9 804 43.8
ATR0585G019 Amborella trichopoda HOM05D006512 ORTHO05D008027 1.4e-88 332.0 579 41.8
Actinidia05076 Actinidia chinensis HOM05D006512 ORTHO05D008027 1.2e-87 328.9 362 54.4
Os01g0698100 Oryza sativa ssp. japonica HOM05D006512 ORTHO05D008027 1.1e-85 322.4 804 35.6
Solyc10g006260.3 Solanum lycopersicum HOM05D006512 ORTHO05D008027 2.5e-85 321.2 857 40.1
Actinidia26683 Actinidia chinensis HOM05D006512 ORTHO05D008027 3.6e-84 317.4 349 53.6
Psat2g014000 Pisum sativum HOM05D006512 ORTHO05D008027 1.3e-81 308.9 741 44.4
SEGI_25925 Sequoiadendron giganteum HOM05D006512 ORTHO05D008027 4.1e-80 303.9 538 40.7
HanXRQChr11g0335931 Helianthus annuus HOM05D006512 ORTHO05D008027 1.5e-79 302.0 847 37.1
Lalb_Chr17g0348651 Lupinus albus HOM05D006512 ORTHO05D008027 3.4e-79 300.8 748 43.7
SHI26585 Sapria himalayana HOM05D006512 ORTHO05D008027 1.7e-73 282.0 774 31.7
Rhsim06G0220200 Rhododendron simsii HOM05D006512 ORTHO05D008027 2.6e-71 274.6 979 33.5
Dinv40780 Davidia involucrata HOM05D006512 ORTHO05D008027 2.7e-68 264.6 600 45.8
Sp6g17030 Schrenkiella parvula HOM05D006512 ORTHO05D008027 2.2e-65 255.0 560 36.6
CDE04G1000 Ceratophyllum demersum HOM05D006512 ORTHO05D008027 1.2e-63 249.2 639 35.4
GSVIVG01037687001 Vitis vinifera HOM05D006512 ORTHO05D008027 5.5e-61 240.4 634 39.0
CANSAT56G4300 Cannabis sativa HOM05D006512 ORTHO05D008027 1.2e-60 239.2 127 92.9
MBI07_g37843_MAGBIO Magnolia biondii HOM05D006512 ORTHO05D008027 3.6e-60 237.7 511 36.2
Mapoly0045s0119 Marchantia polymorpha HOM05D006512 ORTHO05D008027 6.3e-57 226.9 545 36.0
AT5G55100 Arabidopsis thaliana HOM05D006512 ORTHO05D008027 1.4e-51 209.1 543 34.8
Cc05_g14000 Coffea canephora HOM05D006512 ORTHO05D008027 2.5e-45 188.3 668 37.0
QL08p009130 Quercus lobata HOM05D006512 ORTHO05D008027 8.6e-38 163.3 140 63.6
HanXRQChr11g0335921 Helianthus annuus HOM05D006512 ORTHO05D008027 4.3e-37 161.0 145 58.6
GSVIVG01037689001 Vitis vinifera HOM05D006512 ORTHO05D008027 4.3e-37 161.0 147 59.2
CARHR268440 Cardamine hirsuta HOM05D006512 ORTHO05D008027 2.3e-35 155.2 148 54.7
MD11G1213100 Malus domestica HOM05D006512 ORTHO05D008027 5.2e-35 154.1 147 54.4
Cc05_g14010 Coffea canephora HOM05D006512 ORTHO05D008027 2.6e-34 151.8 145 59.3
Eucgr.F00737 Eucalyptus grandis HOM05D006512 ORTHO05D008027 4.9e-33 147.5 145 56.6
Lalb_Chr17g0348641 Lupinus albus HOM05D006512 ORTHO05D008027 6.0e-31 140.6 138 55.8
Solyc10g006250.3 Solanum lycopersicum HOM05D006512 ORTHO05D008027 1.1e-29 136.3 144 54.2
Zm00001eb360910 Zea mays HOM05D006512 ORTHO05D008027 1.1e-29 136.3 566 29.0
VMungo0251G0907 Vigna mungo HOM05D001291 ORTHO05D008027 3.2e-16 91.7 173 39.3
Cpa.g.c37452 Carica papaya HOM05D006512 ORTHO05D008027 2.0e-10 72.4 67 56.7
Cre11.g481700 Chlamydomonas reinhardtii HOM05D006512 ORTHO05D008027 4.9e-09 67.8 68 47.1
CBR_g49368 Chara braunii HOM05D000019 ORTHO05D000048 1.4e-08 66.2 87 40.2


User provided reference genes

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