Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT11G0020 Cannabis sativa HOM05D000877 ORTHO05D114052 4.1e-56 221.1 107 100.0
CANSAT25G3004 Cannabis sativa HOM05D000877 ORTHO05D001509 2.7e-07 58.9 34 76.5
Gohir.A02G171700 Gossypium hirsutum HOM05D000877 ORTHO05D001509 3.5e-07 58.5 34 76.5
Gorai.003G008600 Gossypium raimondii HOM05D000877 ORTHO05D001509 3.5e-07 58.5 34 76.5
CANSAT80G0443 Cannabis sativa HOM05D005087 ORTHO05D006427 4.6e-07 58.2 35 80.0
Dinv33647 Davidia involucrata HOM05D000877 ORTHO05D001509 6.0e-07 57.8 39 66.7
Actinidia22963 Actinidia chinensis HOM05D000877 ORTHO05D001509 7.9e-07 57.4 39 66.7
Cfa006989 Carpinus fangiana HOM05D000877 ORTHO05D001509 7.9e-07 57.4 34 73.5
Haze_03741 Corylus avellana HOM05D000877 ORTHO05D001509 7.9e-07 57.4 34 73.5
Oeu014567.1 Olea europaea HOM05D000877 ORTHO05D001509 7.9e-07 57.4 39 66.7
Duzib264G1178 Durio zibethinus HOM05D000877 ORTHO05D001509 1.0e-06 57.0 34 73.5
Nn5g30749 Nelumbo nucifera HOM05D000877 ORTHO05D001509 1.0e-06 57.0 34 73.5
TAR628G0896 Trochodendron aralioides HOM05D000877 ORTHO05D001509 1.0e-06 57.0 34 73.5
Gohir.D03G008400 Gossypium hirsutum HOM05D000877 ORTHO05D001509 1.3e-06 56.6 34 73.5
Hma1.2p1_0869F.1_g230810 Hydrangea macrophylla HOM05D000877 ORTHO05D001509 1.3e-06 56.6 39 64.1
Hma1.2p1_1306F.1_g274680 Hydrangea macrophylla HOM05D000877 ORTHO05D001509 1.3e-06 56.6 39 64.1
arahy.Tifrunner.gnm1.ann1.BE4V3D Arachis hypogaea HOM05D000877 ORTHO05D001509 1.8e-06 56.2 34 70.6
arahy.Tifrunner.gnm1.ann1.KN6KIA Arachis hypogaea HOM05D000877 ORTHO05D001509 1.8e-06 56.2 34 70.6
CiPaw.08G129500 Carya illinoinensis HOM05D000877 ORTHO05D001509 1.8e-06 56.2 31 77.4
Prupe.7G170500 Prunus persica HOM05D000877 ORTHO05D001509 1.8e-06 56.2 34 70.6
Rhsim10G0210800 Rhododendron simsii HOM05D000877 ORTHO05D001509 1.8e-06 56.2 34 70.6
Thecc.01G015900 Theobroma cacao HOM05D000877 ORTHO05D001509 1.8e-06 56.2 34 73.5
vmacro22143 Vaccinium macrocarpon HOM05D000877 ORTHO05D001509 1.8e-06 56.2 34 70.6
VMungo0251G1714 Vigna mungo HOM05D000877 ORTHO05D001509 1.8e-06 56.2 39 64.1
CSS0035439 Camellia sinensis var. sinensis HOM05D000877 ORTHO05D001509 2.3e-06 55.8 34 70.6
CAN.G1274.21 Capsicum annuum HOM05D000877 ORTHO05D001509 2.3e-06 55.8 34 73.5
Cpa.g.sc6.275 Carica papaya HOM05D000877 ORTHO05D001509 2.3e-06 55.8 39 64.1
CiPaw.07G060300 Carya illinoinensis HOM05D000877 ORTHO05D001509 2.3e-06 55.8 34 70.6
Hma1.2p1_1306F.1_g274690 Hydrangea macrophylla HOM05D000877 ORTHO05D001509 2.3e-06 55.8 34 70.6
RcHm_v2.0_Chr2g0099191 Rosa chinensis HOM05D000877 ORTHO05D001509 2.3e-06 55.8 34 70.6
Sp2g15840 Schrenkiella parvula HOM05D000877 ORTHO05D001509 2.3e-06 55.8 34 73.5
Sed0017980 Sechium edule HOM05D000877 ORTHO05D001509 2.3e-06 55.8 36 66.7
THA.LOC104821137 Tarenaya hassleriana HOM05D000877 ORTHO05D001509 2.3e-06 55.8 34 73.5
Cc07_g10950 Coffea canephora HOM05D000877 ORTHO05D001509 3.0e-06 55.5 39 66.7
COL.COLO4_37248 Corchorus olitorius HOM05D000877 ORTHO05D001509 3.0e-06 55.5 34 73.5
Glyma.02G046800 Glycine max HOM05D000877 ORTHO05D001509 3.0e-06 55.5 34 70.6
Potri.007G056300 Populus trichocarpa HOM05D000877 ORTHO05D001509 3.0e-06 55.5 34 70.6
Sabra07G0048500 Salix brachista HOM05D000877 ORTHO05D001509 3.0e-06 55.5 34 70.6
TWI73G0727 Tripterygium wilfordii HOM05D000877 ORTHO05D001509 3.0e-06 55.5 34 70.6
GSVIVG01008642001 Vitis vinifera HOM05D000877 ORTHO05D001509 3.0e-06 55.5 95 35.8
arahy.Tifrunner.gnm1.ann1.7AM52V Arachis hypogaea HOM05D000877 ORTHO05D001509 3.9e-06 55.1 34 70.6
FAN05G1244 Fragaria x ananassa HOM05D000877 ORTHO05D001509 3.9e-06 55.1 39 61.5
Glyma.01G165000 Glycine max HOM05D000877 ORTHO05D001509 3.9e-06 55.1 34 70.6
MBI12_g13263_MAGBIO Magnolia biondii HOM05D000877 ORTHO05D001509 3.9e-06 55.1 39 64.1
Manes.02G137601 Manihot esculenta HOM05D000877 ORTHO05D001509 3.9e-06 55.1 34 70.6
Manes.02G137701 Manihot esculenta HOM05D000877 ORTHO05D001509 3.9e-06 55.1 34 70.6
Medtr8g075330 Medicago truncatula HOM05D000877 ORTHO05D001509 3.9e-06 55.1 34 70.6
Psat4g101360 Pisum sativum HOM05D000877 ORTHO05D001509 3.9e-06 55.1 34 70.6
QL06p050906 Quercus lobata HOM05D000877 ORTHO05D001509 3.9e-06 55.1 43 60.5
SEGI_02296 Sequoiadendron giganteum HOM05D000877 ORTHO05D012546 3.9e-06 55.1 36 69.4
PGSC0003DMG400003576 Solanum tuberosum HOM05D000877 ORTHO05D001509 3.9e-06 55.1 43 62.8
AL5G15570 Arabidopsis lyrata HOM05D000877 ORTHO05D001509 5.1e-06 54.7 34 70.6
AT3G26720 Arabidopsis thaliana HOM05D000877 ORTHO05D001509 5.1e-06 54.7 34 70.6
BcaC06g31046 Brassica carinata HOM05D000877 ORTHO05D001509 5.1e-06 54.7 34 70.6
A06p41780 Brassica napus HOM05D000877 ORTHO05D001509 5.1e-06 54.7 34 70.6
C07p35750 Brassica napus HOM05D000877 ORTHO05D001509 5.1e-06 54.7 34 70.6
BolC7t44095H Brassica oleracea HOM05D000877 ORTHO05D001509 5.1e-06 54.7 34 70.6
BraA06t27098Z Brassica rapa HOM05D000877 ORTHO05D001509 5.1e-06 54.7 34 70.6
Carub.0005s0472 Capsella rubella HOM05D000877 ORTHO05D001509 5.1e-06 54.7 34 70.6
COL.COLO4_22449 Corchorus olitorius HOM05D000877 ORTHO05D001509 5.1e-06 54.7 34 70.6
Duzib147G0180 Durio zibethinus HOM05D000877 ORTHO05D001509 5.1e-06 54.7 34 70.6
Duzib147G1671 Durio zibethinus HOM05D000877 ORTHO05D001509 5.1e-06 54.7 34 70.6
ECA246G0224 Erigeron canadensis HOM05D000877 ORTHO05D001509 5.1e-06 54.7 43 62.8
FvH4_1g11600 Fragaria vesca HOM05D000877 ORTHO05D001509 5.1e-06 54.7 34 67.6
FAN19G1105 Fragaria x ananassa HOM05D000877 ORTHO05D001509 5.1e-06 54.7 34 67.6
FAN26G1010 Fragaria x ananassa HOM05D000877 ORTHO05D001509 5.1e-06 54.7 34 67.6
PSO135G0228 Papaver somniferum HOM05D000877 ORTHO05D001509 5.1e-06 54.7 34 67.6
RcHm_v2.0_Chr2g0099201 Rosa chinensis HOM05D000877 ORTHO05D001509 5.1e-06 54.7 34 67.6
SMO356G0676 Selaginella moellendorffii HOM05D000877 ORTHO05D001509 5.1e-06 54.7 34 70.6
AL6G24640 Arabidopsis lyrata HOM05D000877 ORTHO05D001509 6.7e-06 54.3 34 70.6
BraA03t09963Z Brassica rapa HOM05D000877 ORTHO05D001509 6.7e-06 54.3 34 70.6
Ca_22390_v3 Cicer arietinum L. HOM05D000877 ORTHO05D001509 6.7e-06 54.3 34 67.6
ClCG01G020400 Citrullus lanatus HOM05D000877 ORTHO05D001509 6.7e-06 54.3 36 63.9
Ciclev10030627m.g Citrus clementina HOM05D000877 ORTHO05D001509 6.7e-06 54.3 34 70.6
MELO3C007919.2 Cucumis melo HOM05D000877 ORTHO05D001509 6.7e-06 54.3 36 63.9
CsaV3_6G047280 Cucumis sativus L. HOM05D000877 ORTHO05D001509 6.7e-06 54.3 36 63.9
FAN23G1863 Fragaria x ananassa HOM05D000877 ORTHO05D001509 6.7e-06 54.3 62 45.2
FAN26G0857 Fragaria x ananassa HOM05D000877 ORTHO05D001509 6.7e-06 54.3 36 63.9
FAN28G2160 Fragaria x ananassa HOM05D000877 ORTHO05D001509 6.7e-06 54.3 36 63.9
HanXRQChr09g0256531 Helianthus annuus HOM05D000877 ORTHO05D001509 6.7e-06 54.3 34 70.6
Lsat_1_v5_gn_4_186200 Lactuca sativa HOM05D000877 ORTHO05D001509 6.7e-06 54.3 34 70.6
MD02G1128700 Malus domestica HOM05D000877 ORTHO05D001509 6.7e-06 54.3 34 67.6
MD02G1129000 Malus domestica HOM05D000877 ORTHO05D001509 6.7e-06 54.3 34 67.6
SalBow3G3565 Salvia bowleyana HOM05D000877 ORTHO05D001509 6.7e-06 54.3 82 36.6
TPR.G10340 Trifolium pratense HOM05D000877 ORTHO05D001509 6.7e-06 54.3 34 70.6
GSVIVG01008340001 Vitis vinifera HOM05D000877 ORTHO05D001509 6.7e-06 54.3 34 70.6
Aa31LG11G15400 Aethionema arabicum HOM05D000877 ORTHO05D001509 8.7e-06 53.9 34 67.6
Aa31LG2G5840 Aethionema arabicum HOM05D000877 ORTHO05D001509 8.7e-06 53.9 34 70.6
Aqoxy6G02185 Aquilegia oxysepala HOM05D000877 ORTHO05D001509 8.7e-06 53.9 34 70.6
BcaB01g05323 Brassica carinata HOM05D000877 ORTHO05D001509 8.7e-06 53.9 34 67.6
A03p06330 Brassica napus HOM05D000877 ORTHO05D001509 8.7e-06 53.9 34 67.6
C03p07300 Brassica napus HOM05D000877 ORTHO05D001509 8.7e-06 53.9 34 67.6
BolC3t13232H Brassica oleracea HOM05D000877 ORTHO05D001509 8.7e-06 53.9 34 67.6
CBR_g23169 Chara braunii HOM05D000877 ORTHO05D001509 8.7e-06 53.9 34 70.6
Duzib205G0018 Durio zibethinus HOM05D000877 ORTHO05D001509 8.7e-06 53.9 34 70.6
ECA232G0002 Erigeron canadensis HOM05D000877 ORTHO05D001509 8.7e-06 53.9 34 70.6
Migut.H02173 Erythranthe guttata HOM05D000877 ORTHO05D001509 8.7e-06 53.9 39 61.5
Thhalv10003577m.g Eutrema salsugineum HOM05D000877 ORTHO05D001509 8.7e-06 53.9 34 70.6
FvH4_1g11550 Fragaria vesca HOM05D000877 ORTHO05D001509 8.7e-06 53.9 34 67.6
Gohir.A03G056250 Gossypium hirsutum HOM05D000877 ORTHO05D001509 8.7e-06 53.9 34 70.6
Gohir.D03G110200 Gossypium hirsutum HOM05D000877 ORTHO05D001509 8.7e-06 53.9 34 70.6
Gorai.003G116600 Gossypium raimondii HOM05D000877 ORTHO05D001509 8.7e-06 53.9 34 70.6
Lj4g0002138 Lotus japonicus HOM05D000877 ORTHO05D001509 8.7e-06 53.9 34 67.6
Lalb_Chr05g0229791 Lupinus albus HOM05D000877 ORTHO05D001509 8.7e-06 53.9 34 70.6
Sp6g30020 Schrenkiella parvula HOM05D000877 ORTHO05D001509 8.7e-06 53.9 34 67.6
Sopen02g028470 Solanum pennellii HOM05D000877 ORTHO05D001509 8.7e-06 53.9 34 70.6
TPR.G19501 Trifolium pratense HOM05D000877 ORTHO05D001509 8.7e-06 53.9 39 61.5


User provided reference genes

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