Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G3118 Cannabis sativa HOM05D006778 ORTHO05D008341 4.5e-72 274.6 154 100.0
CANSAT01G2408 Cannabis sativa HOM05D006778 ORTHO05D008341 2.2e-71 272.3 154 98.7
Prupe.8G209000 Prunus persica HOM05D006778 ORTHO05D008341 4.6e-40 168.3 152 58.6
CiPaw.03G152900 Carya illinoinensis HOM05D006778 ORTHO05D008341 5.6e-38 161.4 150 56.0
RcHm_v2.0_Chr6g0285481 Rosa chinensis HOM05D006778 ORTHO05D008341 3.6e-37 158.7 150 58.0
Actinidia37573 Actinidia chinensis HOM05D006778 ORTHO05D008341 1.4e-36 156.8 150 55.3
Manes.12G043800 Manihot esculenta HOM05D006778 ORTHO05D008341 1.8e-36 156.4 152 54.6
FAN15G2222 Fragaria x ananassa HOM05D006778 ORTHO05D008341 4.0e-36 155.2 150 56.7
MD05G1182200 Malus domestica HOM05D006778 ORTHO05D008341 4.0e-36 155.2 150 56.7
FvH4_2g19780 Fragaria vesca HOM05D006778 ORTHO05D008341 3.4e-35 152.1 150 56.0
TAR362G0656 Trochodendron aralioides HOM05D006778 ORTHO05D008341 3.4e-35 152.1 152 52.6
Cfa002523 Carpinus fangiana HOM05D006778 ORTHO05D008341 4.4e-35 151.8 146 54.1
Glyma.10G042900 Glycine max HOM05D006778 ORTHO05D008341 4.4e-35 151.8 150 53.3
QL07p037469 Quercus lobata HOM05D006778 ORTHO05D008341 2.2e-34 149.4 170 48.2
THA.LOC104820057 Tarenaya hassleriana HOM05D006778 ORTHO05D008341 2.2e-34 149.4 150 50.7
CiPaw.04G108200 Carya illinoinensis HOM05D006778 ORTHO05D008341 2.9e-34 149.1 179 46.9
Lj3g0024250 Lotus japonicus HOM05D006778 ORTHO05D008341 8.4e-34 147.5 150 52.7
Rhsim13G0042100 Rhododendron simsii HOM05D006778 ORTHO05D008341 3.2e-33 145.6 147 51.0
arahy.Tifrunner.gnm1.ann1.01AYHN Arachis hypogaea HOM05D006778 ORTHO05D008341 4.1e-33 145.2 150 51.3
Glyma.13G130200 Glycine max HOM05D006778 ORTHO05D008341 4.1e-33 145.2 146 52.1
Lj5g0022938 Lotus japonicus HOM05D006778 ORTHO05D008341 5.4e-33 144.8 150 50.0
arahy.Tifrunner.gnm1.ann1.PE83GC Arachis hypogaea HOM05D006778 ORTHO05D008341 2.7e-32 142.5 150 50.7
Sed0012724 Sechium edule HOM05D006778 ORTHO05D008341 3.5e-32 142.1 154 50.6
GSVIVG01028519001 Vitis vinifera HOM05D006778 ORTHO05D008341 3.5e-32 142.1 150 50.7
ClCG07G001620 Citrullus lanatus HOM05D006778 ORTHO05D008341 6.0e-32 141.4 150 50.7
MELO3C026499.2 Cucumis melo HOM05D006778 ORTHO05D008341 1.0e-31 140.6 151 49.0
CsaV3_6G036140 Cucumis sativus L. HOM05D006778 ORTHO05D008341 1.3e-31 140.2 151 49.0
SGA_v2.0_scaffold8G04666 Striga asiatica HOM05D006778 ORTHO05D008341 1.3e-31 140.2 149 49.7
Lalb_Chr21g0314231 Lupinus albus HOM05D006778 ORTHO05D008341 2.3e-31 139.4 151 49.7
Cc01_g17420 Coffea canephora HOM05D006778 ORTHO05D008341 3.9e-31 138.7 149 47.7
AUR62031811 Chenopodium quinoa HOM05D006778 ORTHO05D008341 5.1e-31 138.3 165 52.1
DCAR_012626 Daucus carota HOM05D006778 ORTHO05D008341 6.6e-31 137.9 150 49.3
Nn1g03098 Nelumbo nucifera HOM05D006778 ORTHO05D008341 6.6e-31 137.9 164 47.6
Thecc.01G232400 Theobroma cacao HOM05D006778 ORTHO05D008341 1.5e-30 136.7 173 52.0
CAN.G941.43 Capsicum annuum HOM05D006778 ORTHO05D008341 4.3e-30 135.2 152 45.4
Nitab4.5_0001740g0070 Nicotiana tabacum HOM05D006778 ORTHO05D008341 4.3e-30 135.2 153 47.1
ECA247G0226 Erigeron canadensis HOM05D000070 ORTHO05D003190 5.6e-30 134.8 152 49.3
vmacro02733 Vaccinium macrocarpon HOM05D006778 ORTHO05D008341 5.6e-30 134.8 181 43.6
Phvul.007G156300 Phaseolus vulgaris HOM05D006778 ORTHO05D008341 7.3e-30 134.4 154 48.7
Sabra02G0191900 Salix brachista HOM05D006778 ORTHO05D008341 6.2e-29 131.3 155 49.0
Solyc06g008020.3 Solanum lycopersicum HOM05D006778 ORTHO05D008341 6.2e-29 131.3 150 43.3
Cpa.g.sc8.198 Carica papaya HOM05D006778 ORTHO05D008341 8.1e-29 131.0 146 47.3
Sp7g26820 Schrenkiella parvula HOM05D006778 ORTHO05D008341 8.1e-29 131.0 153 46.4
BcaNung01362 Brassica carinata HOM05D006778 ORTHO05D008341 1.1e-28 130.6 153 47.1
FAN24G1005 Fragaria x ananassa HOM05D006778 ORTHO05D008341 1.1e-28 130.6 165 47.3
Nitab4.5_0003180g0010 Nicotiana tabacum HOM05D006778 ORTHO05D008341 1.1e-28 130.6 153 45.8
TPR.G33801 Trifolium pratense HOM05D006778 ORTHO05D008341 1.1e-28 130.6 150 50.7
BcaC09g51658 Brassica carinata HOM05D006778 ORTHO05D008341 1.4e-28 130.2 153 45.8
Potri.002G252700 Populus trichocarpa HOM05D006778 ORTHO05D008341 1.4e-28 130.2 156 47.4
Migut.D00505 Erythranthe guttata HOM05D006778 ORTHO05D008341 1.8e-28 129.8 148 43.9
COL.COLO4_28579 Corchorus olitorius HOM05D006778 ORTHO05D008341 2.4e-28 129.4 161 52.8
Medtr1g069150 Medicago truncatula HOM05D006778 ORTHO05D008341 3.1e-28 129.0 166 44.0
CARHR236610 Cardamine hirsuta HOM05D006778 ORTHO05D008341 5.2e-28 128.3 178 43.3
Psat6g064720 Pisum sativum HOM05D006778 ORTHO05D008341 5.2e-28 128.3 165 44.2
Duzib133G1327 Durio zibethinus HOM05D006778 ORTHO05D008341 1.2e-27 127.1 172 50.0
PGR044G1830 Punica granatum HOM05D006778 ORTHO05D008341 2.0e-27 126.3 153 44.4
Pp3c19_5220 Physcomitrium patens HOM05D006778 ORTHO05D008341 2.6e-27 125.9 152 45.4
Gorai.004G223900 Gossypium raimondii HOM05D006778 ORTHO05D008341 5.8e-27 124.8 179 43.6
Sopen06g002860 Solanum pennellii HOM05D006778 ORTHO05D008341 5.8e-27 124.8 150 47.3
AT4G28820 Arabidopsis thaliana HOM05D006778 ORTHO05D008341 3.8e-26 122.1 161 42.2
Gohir.D08G211201 Gossypium hirsutum HOM05D006778 ORTHO05D008341 1.9e-25 119.8 171 43.3
Gohir.A08G193200 Gossypium hirsutum HOM05D006778 ORTHO05D008341 7.1e-25 117.9 172 42.4
Thhalv10026155m.g Eutrema salsugineum HOM05D006778 ORTHO05D008341 1.2e-24 117.1 178 39.9
EL10Ac7g17819 Beta vulgaris HOM05D006778 ORTHO05D008341 1.6e-24 116.7 144 43.1
TWI14G0487 Tripterygium wilfordii HOM05D006778 ORTHO05D008341 1.6e-24 116.7 182 48.4
Carub.0007s1182 Capsella rubella HOM05D006778 ORTHO05D008341 1.0e-23 114.0 178 38.2
PGR044G0410 Punica granatum HOM05D006778 ORTHO05D008341 1.7e-23 113.2 152 41.4
Aqoxy2G03836 Aquilegia oxysepala HOM05D006778 ORTHO05D008341 2.3e-23 112.8 146 41.8
HPP92_014070 Vanilla planifolia HOM05D006778 ORTHO05D008341 4.3e-22 108.6 149 41.6
Mapoly0102s0014 Marchantia polymorpha HOM05D006778 ORTHO05D008341 5.6e-22 108.2 151 45.0
A01p09090 Brassica napus HOM05D006778 ORTHO05D008341 7.3e-22 107.8 164 40.2
BolC1t01026H Brassica oleracea HOM05D006778 ORTHO05D008341 3.6e-21 105.5 164 39.6
ATR0787G018 Amborella trichopoda HOM05D006778 ORTHO05D008341 5.3e-20 101.7 150 38.0
AL7G23670 Arabidopsis lyrata HOM05D006778 ORTHO05D008341 6.9e-20 101.3 189 35.4
CDE06G1811 Ceratophyllum demersum HOM05D006778 ORTHO05D008341 1.2e-19 100.5 146 46.6
Haze_24755 Corylus avellana HOM05D006778 ORTHO05D008341 1.2e-19 100.5 97 51.5
Haze_24757 Corylus avellana HOM05D006778 ORTHO05D008341 1.2e-19 100.5 97 51.5
Dinv19236 Davidia involucrata HOM05D006778 ORTHO05D008341 1.5e-19 100.1 153 39.9
CBR_g29688 Chara braunii HOM05D006778 ORTHO05D008341 2.6e-19 99.4 149 39.6
SMO111G0074 Selaginella moellendorffii HOM05D006778 ORTHO05D008341 1.3e-18 97.1 146 39.0
C01p10640 Brassica napus HOM05D006778 ORTHO05D008341 1.7e-18 96.7 161 37.9
AUR62008897 Chenopodium quinoa HOM05D006778 ORTHO05D008341 8.4e-18 94.4 141 47.5
CSS0042066 Camellia sinensis var. sinensis HOM05D006778 ORTHO05D008341 3.2e-17 92.4 172 34.9
BolC7t46124H Brassica oleracea HOM05D006778 ORTHO05D008341 4.2e-17 92.0 198 35.9
Aa31LG2G21570 Aethionema arabicum HOM05D006778 ORTHO05D008341 9.3e-17 90.9 156 39.7
BraA01t00857Z Brassica rapa HOM05D006778 ORTHO05D008341 2.7e-16 89.4 159 37.1
PGSC0003DMG400014691 Solanum tuberosum HOM05D006778 ORTHO05D008341 2.7e-16 89.4 147 38.1
Zm00001eb149030 Zea mays HOM05D006778 ORTHO05D008341 3.5e-16 89.0 150 37.3
C07p56450 Brassica napus HOM05D006778 ORTHO05D008341 4.6e-16 88.6 198 35.4
A03p58430 Brassica napus HOM05D006778 ORTHO05D008341 6.0e-16 88.2 191 34.0
CDE07G0370 Ceratophyllum demersum HOM05D006778 ORTHO05D008341 6.0e-16 88.2 146 36.3
Actinidia30101 Actinidia chinensis HOM05D006778 ORTHO05D008341 7.9e-16 87.8 77 59.7
Atru.chr5.1931 Acer truncatum HOM05D006778 ORTHO05D008341 1.3e-15 87.0 74 62.2
MSTRG.18371 Avicennia marina HOM05D006778 ORTHO05D008341 1.3e-15 87.0 154 36.4
Hma1.2p1_1858F.1_g305520 Hydrangea macrophylla HOM05D006778 ORTHO05D008341 1.3e-13 80.5 46 71.7
AagrBONN_evm.TU.Sc2ySwM_228.3325 Anthoceros agrestis HOM05D006778 ORTHO05D008341 1.6e-13 80.1 148 34.5
Sed0026958 Sechium edule HOM05D006778 ORTHO05D008341 8.1e-13 77.8 73 56.2
Sc17g0002480 Simmondsia chinensis HOM05D006778 ORTHO05D008341 8.1e-13 77.8 102 40.2
MCO09G744 Micromonas commoda HOM05D004020 ORTHO05D004735 5.3e-12 75.1 146 34.2
MD10G1170500 Malus domestica HOM05D006778 ORTHO05D008341 1.5e-11 73.6 145 36.6
VMungo0720G2677 Vigna mungo HOM05D006778 ORTHO05D008341 2.0e-11 73.2 74 52.7
AagrBONN_evm.TU.Sc2ySwM_368.1574 Anthoceros agrestis HOM05D006778 ORTHO05D008341 8.4e-10 67.8 125 36.8
Gohir.D08G007200 Gossypium hirsutum HOM05D006778 ORTHO05D008341 1.4e-09 67.0 88 44.3
Hund05528 Selenicereus undatus HOM05D006778 ORTHO05D008341 2.4e-09 66.2 140 35.7
MBI11_g20194_MAGBIO Magnolia biondii HOM05D006778 ORTHO05D008341 5.5e-09 65.1 53 62.3
Gohir.A05G416601 Gossypium hirsutum HOM05D006778 ORTHO05D008341 1.6e-08 63.5 88 43.2
Gohir.A05G417001 Gossypium hirsutum HOM05D006778 ORTHO05D008341 1.6e-08 63.5 88 43.2
Gorai.012G000200 Gossypium raimondii HOM05D006778 ORTHO05D008341 1.6e-08 63.5 88 43.2
Lsat_1_v5_gn_9_11140 Lactuca sativa HOM05D006778 ORTHO05D008341 4.6e-08 62.0 69 50.7
Ca_09622_v3 Cicer arietinum L. HOM05D006778 ORTHO05D008341 6.0e-08 61.6 64 50.0
SalBow4G2567 Salvia bowleyana HOM05D006778 ORTHO05D008341 6.0e-08 61.6 51 60.8
Peaxi162Scf00499g00413 Petunia axillaris HOM05D006778 ORTHO05D008341 3.9e-07 58.9 71 42.3
SEGI_27672 Sequoiadendron giganteum HOM05D006778 ORTHO05D008341 6.7e-07 58.2 52 55.8
PSO063G2427 Papaver somniferum HOM05D006778 ORTHO05D008341 4.3e-06 55.5 76 39.5


User provided reference genes

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