Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G2997 Cannabis sativa HOM05D006175 ORTHO05D008081 1.6e-310 1068.5 532 100.0
Cfa020669 Carpinus fangiana HOM05D006175 ORTHO05D008081 3.3e-247 858.2 528 78.8
Lj2g0014656 Lotus japonicus HOM05D006175 ORTHO05D008081 1.7e-243 845.9 536 76.5
CiPaw.15G150200 Carya illinoinensis HOM05D006175 ORTHO05D008081 3.5e-241 838.2 533 77.1
arahy.Tifrunner.gnm1.ann1.R57YID Arachis hypogaea HOM05D006175 ORTHO05D008081 1.3e-240 836.3 538 77.7
Ciclev10019690m.g Citrus clementina HOM05D006175 ORTHO05D008081 2.3e-240 835.5 533 76.9
Eucgr.H00594 Eucalyptus grandis HOM05D006175 ORTHO05D008081 3.0e-240 835.1 531 74.8
Glyma.16G218700 Glycine max HOM05D006175 ORTHO05D008081 8.7e-240 833.6 531 76.1
Gohir.A05G003900 Gossypium hirsutum HOM05D006175 ORTHO05D008081 3.3e-239 831.6 532 75.8
Gohir.D05G004300 Gossypium hirsutum HOM05D006175 ORTHO05D008081 3.3e-239 831.6 527 76.3
QL10p033089 Quercus lobata HOM05D006175 ORTHO05D008081 2.2e-238 828.9 562 74.4
arahy.Tifrunner.gnm1.ann1.SV5NHS Arachis hypogaea HOM05D006175 ORTHO05D008081 1.1e-237 826.6 547 76.2
MELO3C001937.2 Cucumis melo HOM05D006175 ORTHO05D008081 1.1e-237 826.6 529 75.6
Potri.012G039300 Populus trichocarpa HOM05D006175 ORTHO05D008081 1.4e-237 826.2 537 74.7
Phvul.004G144700 Phaseolus vulgaris HOM05D006175 ORTHO05D008081 4.1e-237 824.7 534 74.7
TWI60G0630 Tripterygium wilfordii HOM05D006175 ORTHO05D008081 3.4e-236 821.6 532 74.6
PGR083G2599 Punica granatum HOM05D006175 ORTHO05D008081 2.2e-235 818.9 531 73.3
Thecc.03G068300 Theobroma cacao HOM05D006175 ORTHO05D008081 2.2e-235 818.9 525 75.6
VMungo0464G1920 Vigna mungo HOM05D006175 ORTHO05D008081 2.2e-235 818.9 537 74.9
GSVIVG01008158001 Vitis vinifera HOM05D006175 ORTHO05D008081 1.1e-234 816.6 532 75.0
CsaV3_1G032270 Cucumis sativus L. HOM05D006175 ORTHO05D008081 1.9e-234 815.8 529 75.0
Duzib168G0906 Durio zibethinus HOM05D006175 ORTHO05D008081 1.9e-234 815.8 561 71.5
Atru.chr3.1303 Acer truncatum HOM05D006175 ORTHO05D008081 4.2e-234 814.7 532 74.4
FvH4_5g17980 Fragaria vesca HOM05D006175 ORTHO05D008081 5.5e-234 814.3 528 74.6
Gorai.009G004100 Gossypium raimondii HOM05D006175 ORTHO05D008081 1.6e-233 812.8 532 75.0
Cc04_g09090 Coffea canephora HOM05D006175 ORTHO05D008081 2.3e-232 808.9 532 73.3
RcHm_v2.0_Chr7g0177621 Rosa chinensis HOM05D006175 ORTHO05D008081 1.5e-231 806.2 544 73.0
Sed0010232 Sechium edule HOM05D006175 ORTHO05D008081 2.5e-231 805.4 528 74.1
PGSC0003DMG400031043 Solanum tuberosum HOM05D006175 ORTHO05D008081 4.3e-231 804.7 532 71.2
Oeu019145.1 Olea europaea HOM05D006175 ORTHO05D008081 5.7e-231 804.3 541 72.3
ClCG04G012690 Citrullus lanatus HOM05D006175 ORTHO05D008081 2.2e-230 802.4 534 73.4
DCAR_023267 Daucus carota HOM05D006175 ORTHO05D008081 4.8e-230 801.2 573 69.1
Solyc03g098250.4 Solanum lycopersicum HOM05D006175 ORTHO05D008081 8.2e-230 800.4 532 70.9
Migut.O00238 Erythranthe guttata HOM05D006175 ORTHO05D008081 9.1e-229 797.0 536 71.8
Sopen03g028960 Solanum pennellii HOM05D006175 ORTHO05D008081 2.5e-226 788.9 532 70.5
Prupe.8G055400 Prunus persica HOM05D006175 ORTHO05D008081 7.9e-225 783.9 535 72.5
CAN.G637.8 Capsicum annuum HOM05D006175 ORTHO05D008081 1.8e-224 782.7 533 70.5
SalBow5G1258 Salvia bowleyana HOM05D006175 ORTHO05D008081 1.1e-221 773.5 544 68.8
Sabra12G0027800 Salix brachista HOM05D006175 ORTHO05D008081 5.3e-221 771.2 539 70.9
Zm00001eb037700 Zea mays HOM05D006175 ORTHO05D008081 1.2e-220 770.0 530 69.8
THA.LOC104810934 Tarenaya hassleriana HOM05D006175 ORTHO05D008081 2.0e-220 769.2 532 69.9
SpUn0288_0010 Schrenkiella parvula HOM05D006175 ORTHO05D008081 3.8e-219 765.0 529 69.8
Thhalv10001961m.g Eutrema salsugineum HOM05D006175 ORTHO05D008081 5.5e-218 761.1 529 69.0
SHI32102 Sapria himalayana HOM05D006175 ORTHO05D008081 6.1e-217 757.7 565 66.9
PSO063G7422 Papaver somniferum HOM05D006175 ORTHO05D008081 8.0e-217 757.3 529 68.4
PSO782G5703 Papaver somniferum HOM05D006175 ORTHO05D008081 1.0e-216 756.9 529 68.4
AT5G22110 Arabidopsis thaliana HOM05D006175 ORTHO05D008081 1.4e-216 756.5 527 70.2
SGA_v2.0_scaffold90G27775 Striga asiatica HOM05D006175 ORTHO05D008081 2.3e-216 755.7 532 69.5
TAR622G0246 Trochodendron aralioides HOM05D006175 ORTHO05D008081 2.3e-216 755.7 486 76.1
Peaxi162Scf00171g00431 Petunia axillaris HOM05D006175 ORTHO05D008081 6.7e-216 754.2 537 68.7
Aa31LG1G13320 Aethionema arabicum HOM05D006175 ORTHO05D008081 1.7e-214 749.6 527 68.9
AL6G33090 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 4.8e-214 748.0 527 69.6
A03p26700 Brassica napus HOM05D006175 ORTHO05D008081 2.4e-213 745.7 528 68.6
TPR.G28014 Trifolium pratense HOM05D006175 ORTHO05D008081 4.1e-213 745.0 554 67.0
C03p31990 Brassica napus HOM05D006175 ORTHO05D008081 9.1e-213 743.8 529 68.2
Aqoxy2G03817 Aquilegia oxysepala HOM05D006175 ORTHO05D008081 1.2e-212 743.4 534 68.0
BcaC01g04929 Brassica carinata HOM05D006175 ORTHO05D008081 1.6e-212 743.0 529 68.2
Medtr6g075170 Medicago truncatula HOM05D006175 ORTHO05D008081 2.0e-212 742.7 534 68.9
BolC3t15542H Brassica oleracea HOM05D006175 ORTHO05D008081 2.6e-212 742.3 529 68.2
Carub.0006s1975 Capsella rubella HOM05D006175 ORTHO05D008081 5.0e-211 738.0 531 68.4
Dinv02367 Davidia involucrata HOM05D006175 ORTHO05D008081 1.1e-210 736.9 527 69.4
Os05g0160800 Oryza sativa ssp. japonica HOM05D006175 ORTHO05D008081 7.2e-210 734.2 505 70.3
BraA03t11882Z Brassica rapa HOM05D006175 ORTHO05D008081 8.0e-209 730.7 531 67.4
BcaB01g03058 Brassica carinata HOM05D006175 ORTHO05D008081 1.4e-208 729.9 529 67.9
ECA238G0751 Erigeron canadensis HOM05D006175 ORTHO05D008081 3.0e-208 728.8 529 67.1
Manes.03G098800 Manihot esculenta HOM05D006175 ORTHO05D008081 3.0e-208 728.8 491 73.1
Lsat_1_v5_gn_2_15241 Lactuca sativa HOM05D006175 ORTHO05D008081 7.5e-207 724.2 532 66.5
MD06G1235400 Malus domestica HOM05D006175 ORTHO05D008081 1.7e-206 723.0 533 68.3
Cpa.g.sc103.12 Carica papaya HOM05D006175 ORTHO05D008081 8.3e-206 720.7 525 68.0
SEGI_25528 Sequoiadendron giganteum HOM05D006175 ORTHO05D008081 1.8e-205 719.5 532 62.2
CSS0011699 Camellia sinensis var. sinensis HOM05D006175 ORTHO05D008081 1.3e-203 713.4 547 64.9
Sc10g0008900 Simmondsia chinensis HOM05D006175 ORTHO05D008081 2.5e-202 709.1 534 64.0
EL10Ac3g05085 Beta vulgaris HOM05D006175 ORTHO05D008081 4.7e-201 704.9 532 63.7
Nitab4.5_0005973g0040 Nicotiana tabacum HOM05D006175 ORTHO05D008081 8.3e-198 694.1 552 63.2
vmacro03513 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 1.2e-193 680.2 607 59.8
Lj5A165T85 Lonicera japonica HOM05D006175 ORTHO05D008081 9.8e-191 670.6 481 69.4
COL.COLO4_27108 Corchorus olitorius HOM05D006175 ORTHO05D008081 8.9e-184 647.5 511 64.2
Haze_18963 Corylus avellana HOM05D006175 ORTHO05D008081 1.3e-182 643.7 528 63.6
Ah.04g156800 Amaranthus hybridus HOM05D006175 ORTHO05D008081 1.6e-177 626.7 532 58.3
Nitab4.5_0001180g0190 Nicotiana tabacum HOM05D006175 ORTHO05D008081 1.6e-177 626.7 541 59.0
Hund09784 Selenicereus undatus HOM05D006175 ORTHO05D008081 4.4e-175 618.6 532 59.6
SMO089G0008 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 4.7e-169 598.6 532 56.8
ATR0598G269 Amborella trichopoda HOM05D006175 ORTHO05D008081 1.5e-167 593.6 539 56.4
Pp3c16_3220 Physcomitrium patens HOM05D006175 ORTHO05D008081 1.5e-167 593.6 528 53.4
Mapoly0003s0120 Marchantia polymorpha HOM05D006175 ORTHO05D008081 2.2e-166 589.7 526 53.8
AUR62002056 Chenopodium quinoa HOM05D006175 ORTHO05D008081 1.4e-165 587.0 585 54.2
Prupe.5G240100 Prunus persica HOM05D006175 ORTHO05D008081 7.1e-165 584.7 557 57.8
vmacro01251 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 2.3e-163 579.7 634 51.4
HPP92_019162 Vanilla planifolia HOM05D006175 ORTHO05D008081 1.8e-160 570.1 527 56.7
AUR62028170 Chenopodium quinoa HOM05D006175 ORTHO05D008081 6.4e-158 561.6 532 54.1
SMO200G0091 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 1.8e-152 543.5 535 52.7
Lalb_Chr22g0353691 Lupinus albus HOM05D006175 ORTHO05D008081 3.9e-147 525.8 301 81.1
HanXRQChr05g0129731 Helianthus annuus HOM05D006175 ORTHO05D008081 4.6e-140 502.3 316 75.3
AagrBONN_evm.TU.Sc2ySwM_369.495 Anthoceros agrestis HOM05D006175 ORTHO05D008081 1.9e-133 480.3 525 46.5
Rhsim06G0000100 Rhododendron simsii HOM05D006175 ORTHO05D008081 2.5e-130 469.9 300 72.0
Psat6g072600 Pisum sativum HOM05D006175 ORTHO05D008081 1.6e-129 467.2 559 49.6
HanXRQChr11g0338981 Helianthus annuus HOM05D006175 ORTHO05D008081 2.1e-129 466.8 301 74.4
MD14G1242400 Malus domestica HOM05D006175 ORTHO05D008081 1.6e-124 450.7 448 55.8
unitig_0.g1094 Utricularia gibba HOM05D006175 ORTHO05D008081 2.0e-111 407.1 563 42.5
FAN18G1603 Fragaria x ananassa HOM05D006175 ORTHO05D008081 5.9e-111 405.6 232 80.2
Glyma.09G169100 Glycine max HOM05D006175 ORTHO05D008081 3.5e-103 379.8 303 63.7
MCO14G014 Micromonas commoda HOM05D006175 ORTHO05D008081 3.7e-97 359.8 639 33.8
AL4G26880 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 8.0e-84 315.5 371 48.8
Cre10.g424200 Chlamydomonas reinhardtii HOM05D006175 ORTHO05D008081 1.0e-78 298.5 513 36.3
Lalb_Chr22g0353701 Lupinus albus HOM05D006175 ORTHO05D008081 3.8e-78 296.6 214 70.6
PRCOL_00003367 Prasinoderma coloniale HOM05D006175 ORTHO05D008081 2.8e-68 263.8 576 33.5
FAN04G2119 Fragaria x ananassa HOM05D006175 ORTHO05D008081 5.2e-67 259.6 210 64.8
FAN08G2730 Fragaria x ananassa HOM05D006175 ORTHO05D008081 2.2e-65 254.2 210 63.3
FAN13G0892 Fragaria x ananassa HOM05D006175 ORTHO05D008081 3.7e-65 253.4 210 63.3
HanXRQChr05g0129721 Helianthus annuus HOM05D006175 ORTHO05D008081 4.6e-63 246.5 213 59.6
HanXRQChr11g0338971 Helianthus annuus HOM05D006175 ORTHO05D008081 2.5e-61 240.7 213 59.2
VMungo1215G0683 Vigna mungo HOM05D006175 ORTHO05D008081 2.0e-58 231.1 197 58.9
AUR62043421 Chenopodium quinoa HOM05D006175 ORTHO05D008081 1.5e-53 214.9 170 61.8
CDE04G1443 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 1.6e-47 194.9 104 83.7
Ca_23674_v3 Cicer arietinum L. HOM05D006175 ORTHO05D008081 6.6e-38 162.9 184 52.2
CDE04G2185 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 1.7e-33 148.3 85 77.6
Cfa025039 Carpinus fangiana HOM05D006175 ORTHO05D008081 1.2e-31 142.1 576 25.0
Thecc.10G092900 Theobroma cacao HOM05D006175 ORTHO05D008952 7.9e-31 139.4 132 59.8
CDE04G3312 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 4.5e-26 123.6 204 36.8
Thecc.04G242900 Theobroma cacao HOM05D006175 ORTHO05D008081 7.9e-15 86.3 48 81.2
CSS0024377 Camellia sinensis var. sinensis HOM05D006175 ORTHO05D043346 3.0e-14 84.3 48 83.3
CDE04G3394 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 1.5e-13 82.0 100 49.0
Gorai.009G404500 Gossypium raimondii HOM05D006175 ORTHO05D047312 1.3e-09 68.9 54 68.5
TPR.G28017 Trifolium pratense HOM05D006175 ORTHO05D008081 1.3e-09 68.9 55 54.5
BcaC05g28616 Brassica carinata HOM05D002760 ORTHO05D001361 5.0e-09 67.0 31 87.1
A07p06810 Brassica napus HOM05D002760 ORTHO05D003169 5.0e-09 67.0 31 87.1
BNapus_Darmor_BZH_scaffold_38p01460 Brassica napus HOM05D002760 ORTHO05D003169 5.0e-09 67.0 31 87.1
BraA03t12607Z Brassica rapa HOM05D002760 ORTHO05D003169 5.0e-09 67.0 31 87.1
Gohir.D04G101160 Gossypium hirsutum HOM05D006175 ORTHO05D047312 6.5e-09 66.6 70 60.0
C05p47240 Brassica napus HOM05D002760 ORTHO05D003169 1.4e-08 65.5 31 83.9


User provided reference genes

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