Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G2982 Cannabis sativa HOM05D007191 ORTHO05D009370 3.4e-200 701.4 344 100.0
QL06p036361 Quercus lobata HOM05D007191 ORTHO05D009370 1.3e-130 470.3 333 69.4
CiPaw.07G045700 Carya illinoinensis HOM05D007191 ORTHO05D009370 5.3e-129 464.9 309 72.8
Dinv13563 Davidia involucrata HOM05D007191 ORTHO05D009370 3.8e-127 458.8 325 68.9
Prupe.6G204900 Prunus persica HOM05D007191 ORTHO05D009370 1.4e-126 456.8 345 66.1
Dinv36956 Davidia involucrata HOM05D007191 ORTHO05D009370 1.9e-126 456.4 345 66.1
GSVIVG01003951001 Vitis vinifera HOM05D007191 ORTHO05D003232 1.9e-126 456.4 305 72.1
MD01G1041100 Malus domestica HOM05D007191 ORTHO05D009370 1.9e-123 446.4 332 66.9
Ciclev10025907m.g Citrus clementina HOM05D007191 ORTHO05D009370 1.8e-121 439.9 335 64.2
Actinidia25299 Actinidia chinensis HOM05D007191 ORTHO05D009370 2.4e-121 439.5 335 64.8
CSS0046556 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 3.1e-121 439.1 338 65.7
RcHm_v2.0_Chr2g0110691 Rosa chinensis HOM05D007191 ORTHO05D003232 3.1e-121 439.1 333 65.5
Atru.chr3.1215 Acer truncatum HOM05D007191 ORTHO05D009370 1.2e-120 437.2 321 67.0
FvH4_1g19321 Fragaria vesca HOM05D007191 ORTHO05D009370 4.5e-120 435.3 345 64.9
Haze_03901 Corylus avellana HOM05D007191 ORTHO05D009370 1.1e-118 430.6 415 57.1
Manes.13G101800 Manihot esculenta HOM05D007191 ORTHO05D009370 9.3e-118 427.6 311 67.2
COL.COLO4_27378 Corchorus olitorius HOM05D007191 ORTHO05D009370 1.2e-117 427.2 357 61.6
Duzib147G1243 Durio zibethinus HOM05D007191 ORTHO05D009370 6.1e-117 424.9 359 62.1
vmacro13023 Vaccinium macrocarpon HOM05D007191 ORTHO05D009370 6.1e-117 424.9 352 62.2
Thecc.01G088100 Theobroma cacao HOM05D007191 ORTHO05D009370 1.0e-116 424.1 346 61.3
Gorai.007G232000 Gossypium raimondii HOM05D007191 ORTHO05D009370 1.3e-116 423.7 339 62.5
FAN19G2137 Fragaria x ananassa HOM05D007191 ORTHO05D000122 3.9e-116 422.2 343 63.8
Manes.13G092280 Manihot esculenta HOM05D007191 ORTHO05D009370 5.1e-116 421.8 311 65.9
FAN19G0835 Fragaria x ananassa HOM05D007191 ORTHO05D000122 1.9e-115 419.9 343 63.6
CsaV3_3G006990 Cucumis sativus L. HOM05D007191 ORTHO05D009370 2.5e-115 419.5 322 65.2
Gohir.A11G207400 Gossypium hirsutum HOM05D007191 ORTHO05D009370 3.3e-115 419.1 339 61.9
Gohir.D11G215700 Gossypium hirsutum HOM05D007191 ORTHO05D009370 4.3e-115 418.7 339 62.8
Cfa006863 Carpinus fangiana HOM05D007191 ORTHO05D000122 1.6e-114 416.8 372 61.0
Sopen11g005640 Solanum pennellii HOM05D007191 ORTHO05D009370 3.1e-113 412.5 289 67.1
TWI74G0882 Tripterygium wilfordii HOM05D007191 ORTHO05D009370 4.1e-113 412.1 338 62.7
ClCG10G008240 Citrullus lanatus HOM05D007191 ORTHO05D009370 6.9e-113 411.4 309 67.0
MELO3C014951.2 Cucumis melo HOM05D007191 ORTHO05D009370 2.6e-112 409.5 322 64.0
Nitab4.5_0000402g0060 Nicotiana tabacum HOM05D007191 ORTHO05D009370 3.4e-112 409.1 321 62.6
THA.LOC104804178 Tarenaya hassleriana HOM05D007191 ORTHO05D009370 3.4e-112 409.1 299 66.9
Solyc11g010900.2 Solanum lycopersicum HOM05D007191 ORTHO05D009370 5.9e-112 408.3 289 66.4
Potri.005G147600 Populus trichocarpa HOM05D007191 ORTHO05D009370 1.3e-111 407.1 288 68.4
Medtr8g068220 Medicago truncatula HOM05D007191 ORTHO05D009370 1.7e-111 406.8 284 69.7
Psat4g117600 Pisum sativum HOM05D007191 ORTHO05D009370 2.5e-110 402.9 284 68.0
TPR.G29816 Trifolium pratense HOM05D007191 ORTHO05D009370 7.2e-110 401.4 287 66.9
Glyma.08G276900 Glycine max HOM05D007191 ORTHO05D009370 3.6e-109 399.1 284 67.3
Cpa.g.sc55.6 Carica papaya HOM05D007191 ORTHO05D009370 4.6e-109 398.7 342 60.5
Ca_22623_v3 Cicer arietinum L. HOM05D007191 ORTHO05D009370 4.6e-109 398.7 284 68.0
Phvul.003G287700 Phaseolus vulgaris HOM05D007191 ORTHO05D009370 4.6e-109 398.7 284 67.6
VMungo0251G2065 Vigna mungo HOM05D007191 ORTHO05D009370 4.6e-109 398.7 284 67.3
Carub.0007s0220 Capsella rubella HOM05D007191 ORTHO05D009370 6.1e-109 398.3 291 67.4
Sabra05G0118000 Salix brachista HOM05D007191 ORTHO05D009370 6.1e-109 398.3 293 66.6
BcaNung05371 Brassica carinata HOM05D007191 ORTHO05D009370 7.9e-109 397.9 292 65.1
Peaxi162Scf00085g00523 Petunia axillaris HOM05D007191 ORTHO05D009370 1.4e-108 397.1 289 65.1
arahy.Tifrunner.gnm1.ann1.DV4H7C Arachis hypogaea HOM05D007191 ORTHO05D009370 2.3e-108 396.4 284 66.9
AT4G38020 Arabidopsis thaliana HOM05D007191 ORTHO05D009370 5.1e-108 395.2 334 60.8
Lj4g0026970 Lotus japonicus HOM05D007191 ORTHO05D009370 6.7e-108 394.8 284 68.0
Lalb_Chr16g0392111 Lupinus albus HOM05D007191 ORTHO05D009370 6.7e-108 394.8 284 66.2
Thhalv10025567m.g Eutrema salsugineum HOM05D007191 ORTHO05D009370 2.5e-107 392.9 294 65.3
Sp7g35660 Schrenkiella parvula HOM05D007191 ORTHO05D009370 2.5e-107 392.9 330 61.5
Lsat_1_v5_gn_4_142441 Lactuca sativa HOM05D007191 ORTHO05D009370 4.3e-107 392.1 329 59.9
BcaNung00953 Brassica carinata HOM05D007191 ORTHO05D009370 2.2e-106 389.8 291 64.3
C01p01190 Brassica napus HOM05D007191 ORTHO05D009370 6.3e-106 388.3 291 63.9
BolC1t00117H Brassica oleracea HOM05D007191 ORTHO05D009370 6.3e-106 388.3 291 63.9
Eucgr.H02435 Eucalyptus grandis HOM05D007191 ORTHO05D009370 1.1e-105 387.5 288 64.9
A01p01070 Brassica napus HOM05D007191 ORTHO05D009370 3.1e-105 386.0 324 59.9
BraA01t00105Z Brassica rapa HOM05D007191 ORTHO05D009370 3.1e-105 386.0 324 59.9
MBI16_g30311_MAGBIO Magnolia biondii HOM05D007191 ORTHO05D009370 3.1e-105 386.0 329 60.5
CARHR246430 Cardamine hirsuta HOM05D007191 ORTHO05D009370 5.3e-105 385.2 291 66.0
AL7G12620 Arabidopsis lyrata HOM05D007191 ORTHO05D009370 6.9e-105 384.8 330 61.5
Aqoxy6G01485 Aquilegia oxysepala HOM05D007191 ORTHO05D009370 4.5e-104 382.1 301 61.1
AUR62003688 Chenopodium quinoa HOM05D007191 ORTHO05D009370 1.3e-103 380.6 300 62.7
AUR62018000 Chenopodium quinoa HOM05D007191 ORTHO05D009370 2.5e-102 376.3 287 64.1
Aa31LG6G14960 Aethionema arabicum HOM05D007191 ORTHO05D009370 9.4e-102 374.4 316 57.9
HanXRQChr09g0259541 Helianthus annuus HOM05D007191 ORTHO05D009370 7.9e-101 371.3 288 63.5
Ah.03g143260 Amaranthus hybridus HOM05D007191 ORTHO05D009370 1.0e-100 370.9 283 64.7
Sed0016887 Sechium edule HOM05D007191 ORTHO05D009370 1.0e-100 370.9 297 63.3
PSO675G0552 Papaver somniferum HOM05D007191 ORTHO05D009370 1.8e-100 370.2 310 59.4
Oeu017115.1 Olea europaea HOM05D007191 ORTHO05D009370 7.4e-99 364.8 357 52.9
Nitab4.5_0005446g0010 Nicotiana tabacum HOM05D007191 ORTHO05D009370 2.4e-97 359.8 318 57.9
PSO541G2681 Papaver somniferum HOM05D007191 ORTHO05D009370 2.6e-96 356.3 289 60.2
MSTRG.23388 Avicennia marina HOM05D007191 ORTHO05D009370 3.5e-96 355.9 351 51.9
Migut.H02278 Erythranthe guttata HOM05D007191 ORTHO05D009370 1.7e-95 353.6 346 54.9
CDE04G1458 Ceratophyllum demersum HOM05D007191 ORTHO05D009370 5.5e-94 348.6 285 58.6
Nn5g29827 Nelumbo nucifera HOM05D007191 ORTHO05D009370 1.0e-92 344.4 291 57.7
arahy.Tifrunner.gnm1.ann1.6T17AW Arachis hypogaea HOM05D007191 ORTHO05D009370 1.5e-91 340.5 284 60.9
SalBow3G4077 Salvia bowleyana HOM05D007191 ORTHO05D009370 9.7e-91 337.8 332 53.6
Sc03g0000490 Simmondsia chinensis HOM05D007191 ORTHO05D009370 2.8e-90 336.3 273 59.3
DCAR_003441 Daucus carota HOM05D007191 ORTHO05D003232 3.7e-90 335.9 246 65.0
CAN.G1771.10 Capsicum annuum HOM05D007191 ORTHO05D009370 1.1e-89 334.3 248 62.9
Lj2A526T20 Lonicera japonica HOM05D007191 ORTHO05D009370 1.8e-84 317.0 347 51.3
SGA_v2.0_scaffold108G30936 Striga asiatica HOM05D007191 ORTHO05D009370 2.0e-83 313.5 301 50.8
unitig_27.g25347 Utricularia gibba HOM05D007191 ORTHO05D009370 1.7e-82 310.5 288 54.9
Os03g0685100 Oryza sativa ssp. japonica HOM05D007191 ORTHO05D009370 1.4e-81 307.4 284 53.9
HPP92_014152 Vanilla planifolia HOM05D007191 ORTHO05D009370 9.1e-81 304.7 271 55.4
HPP92_014172 Vanilla planifolia HOM05D007191 ORTHO05D009370 1.1e-78 297.7 281 53.7
ECA232G3284 Erigeron canadensis HOM05D000006 ORTHO05D000001 8.0e-77 291.6 235 60.4
PGSC0003DMG400016118 Solanum tuberosum HOM05D007191 ORTHO05D009370 6.8e-76 288.5 200 66.0
SMO364G0498 Selaginella moellendorffii HOM05D007191 ORTHO05D009370 2.0e-72 276.9 319 44.8
Zm00001eb053350 Zea mays HOM05D007191 ORTHO05D009370 2.0e-72 276.9 261 52.9
Pp3c5_6200 Physcomitrium patens HOM05D007191 ORTHO05D009370 4.3e-70 269.2 331 44.4
Mapoly0036s0111 Marchantia polymorpha HOM05D007191 ORTHO05D009370 9.5e-62 241.5 323 42.7
CBR_g31860 Chara braunii HOM05D000601 ORTHO05D000407 2.0e-59 233.8 331 38.7
AUR62043608 Chenopodium quinoa HOM05D007191 ORTHO05D009370 3.6e-53 213.0 144 67.4
Pp3c5_6210 Physcomitrium patens HOM05D007191 ORTHO05D009370 3.6e-53 213.0 250 44.0
Cc00_g34880 Coffea canephora HOM05D007191 ORTHO05D009370 9.8e-51 204.9 154 60.4
PGR102G1719 Punica granatum HOM05D007191 ORTHO05D009370 1.2e-48 198.0 155 60.6
AUR62014153 Chenopodium quinoa HOM05D007191 ORTHO05D002709 6.0e-48 195.7 136 65.4
MCO07G132 Micromonas commoda HOM05D007191 ORTHO05D009370 1.6e-45 187.6 279 40.1
Cre17.g744947 Chlamydomonas reinhardtii HOM05D007191 ORTHO05D009370 4.0e-44 183.0 384 33.3
PRCOL_00003319 Prasinoderma coloniale HOM05D007191 ORTHO05D009370 5.8e-35 152.5 299 35.5
SEGI_29034 Sequoiadendron giganteum HOM05D007191 ORTHO05D009370 1.9e-30 137.5 145 46.9
SEGI_38116 Sequoiadendron giganteum HOM05D007191 ORTHO05D009370 1.6e-29 134.4 167 43.1
Cc07_g13860 Coffea canephora HOM05D007191 ORTHO05D009370 1.0e-23 115.2 94 56.4
RcHm_v2.0_Chr6g0269301 Rosa chinensis HOM05D007191 ORTHO05D009370 3.0e-23 113.6 99 54.5
Cc07_g13870 Coffea canephora HOM05D007191 ORTHO05D003232 2.9e-18 97.1 67 62.7
Ca_28666_v3 Cicer arietinum L. HOM05D005801 ORTHO05D009370 1.3e-13 81.6 149 35.6
CSS0007107 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 8.4e-10 68.9 61 54.1
CSS0022959 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 8.4e-10 68.9 61 54.1
Lsat_1_v5_gn_5_144900 Lactuca sativa HOM05D005801 ORTHO05D008555 3.2e-09 67.0 197 29.9
CDE04G1187 Ceratophyllum demersum HOM05D005801 ORTHO05D008555 5.5e-09 66.2 197 29.9
PRCOL_00003145 Prasinoderma coloniale HOM05D005801 ORTHO05D008555 3.5e-08 63.5 249 26.9
DCAR_028663 Daucus carota HOM05D005801 ORTHO05D008555 1.8e-07 61.2 179 29.6
SMO367G0373 Selaginella moellendorffii HOM05D005801 ORTHO05D008555 1.8e-07 61.2 154 31.8
Sc18g0001500 Simmondsia chinensis HOM05D005801 ORTHO05D008555 3.9e-07 60.1 179 30.7
HanXRQChr10g0318931 Helianthus annuus HOM05D005801 ORTHO05D008555 5.1e-07 59.7 167 31.7
HanXRQChr10g0318941 Helianthus annuus HOM05D005801 ORTHO05D008555 5.1e-07 59.7 167 31.7
HanXRQChr14g0438761 Helianthus annuus HOM05D005801 ORTHO05D008555 5.1e-07 59.7 167 31.7
GSVIVG01015302001 Vitis vinifera HOM05D005801 ORTHO05D008555 5.1e-07 59.7 159 32.1
AagrBONN_evm.TU.Sc2ySwM_117.170 Anthoceros agrestis HOM05D006539 ORTHO05D008694 6.7e-07 59.3 152 27.6
HPP92_009088 Vanilla planifolia HOM05D005801 ORTHO05D008555 2.5e-06 57.4 181 31.5


User provided reference genes

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