Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G2296 Cannabis sativa HOM05D006465 ORTHO05D008207 1.1e-72 276.6 148 100.0
MD07G1057500 Malus domestica HOM05D006465 ORTHO05D008207 8.8e-57 223.8 146 74.0
Glyma.06G153700 Glycine max HOM05D006465 ORTHO05D008207 2.4e-54 215.7 146 76.7
Thecc.01G132600 Theobroma cacao HOM05D006465 ORTHO05D008207 1.6e-53 213.0 121 80.2
Prupe.4G271100 Prunus persica HOM05D006465 ORTHO05D008207 2.7e-53 212.2 116 83.6
Potri.005G063100 Populus trichocarpa HOM05D006465 ORTHO05D008207 1.0e-52 210.3 144 70.1
RcHm_v2.0_Chr6g0264391 Rosa chinensis HOM05D006465 ORTHO05D008207 1.3e-52 209.9 116 81.0
Duzib187G1992 Durio zibethinus HOM05D006465 ORTHO05D008207 2.2e-52 209.1 121 77.7
FvH4_2g08820 Fragaria vesca HOM05D006465 ORTHO05D008207 2.2e-52 209.1 115 82.6
FAN10G0435 Fragaria x ananassa HOM05D006465 ORTHO05D008207 2.2e-52 209.1 115 82.6
FAN15G0521 Fragaria x ananassa HOM05D006465 ORTHO05D008207 2.2e-52 209.1 115 82.6
Ca_16948_v3 Cicer arietinum L. HOM05D002517 ORTHO05D003040 2.9e-52 208.8 148 68.9
Ca_16968_v3 Cicer arietinum L. HOM05D006465 ORTHO05D008207 2.9e-52 208.8 148 68.9
Glyma.04G212600 Glycine max HOM05D006465 ORTHO05D008207 2.9e-52 208.8 119 81.5
TPR.G28231 Trifolium pratense HOM05D006465 ORTHO05D008207 3.8e-52 208.4 146 68.5
Ciclev10002814m.g Citrus clementina HOM05D006465 ORTHO05D008207 5.0e-52 208.0 146 66.4
Gohir.A05G384500 Gossypium hirsutum HOM05D005188 ORTHO05D006153 5.0e-52 208.0 117 80.3
Lalb_Chr08g0238351 Lupinus albus HOM05D006465 ORTHO05D008207 5.0e-52 208.0 119 82.4
Medtr3g096320 Medicago truncatula HOM05D006465 ORTHO05D008207 5.0e-52 208.0 114 84.2
Psat5g062320 Pisum sativum HOM05D006465 ORTHO05D008207 8.5e-52 207.2 146 68.5
CiPaw.04G082200 Carya illinoinensis HOM05D006465 ORTHO05D008207 1.1e-51 206.8 117 79.5
Phvul.009G150900 Phaseolus vulgaris HOM05D006465 ORTHO05D008207 1.1e-51 206.8 119 80.7
Gohir.D04G031000 Gossypium hirsutum HOM05D006465 ORTHO05D008207 1.5e-51 206.5 117 79.5
Gorai.012G035200 Gossypium raimondii HOM05D005188 ORTHO05D006153 1.5e-51 206.5 117 79.5
Lj1g0025116 Lotus japonicus HOM05D006465 ORTHO05D008207 4.2e-51 204.9 146 67.8
Haze_25235 Corylus avellana HOM05D006465 ORTHO05D008207 9.4e-51 203.8 117 79.5
TWI79G1280 Tripterygium wilfordii HOM05D006465 ORTHO05D008207 9.4e-51 203.8 119 77.3
Manes.03G123050 Manihot esculenta HOM05D006465 ORTHO05D008207 1.6e-50 203.0 144 66.7
Sabra05G0052300 Salix brachista HOM05D006465 ORTHO05D008207 1.6e-50 203.0 119 76.5
Hund23271 Selenicereus undatus HOM05D006465 ORTHO05D008207 3.6e-50 201.8 114 82.5
BraA10t44842Z Brassica rapa HOM05D006465 ORTHO05D008207 1.4e-49 199.9 114 80.7
THA.LOC104800074 Tarenaya hassleriana HOM05D006465 ORTHO05D008207 1.4e-49 199.9 117 77.8
BcaB08g37219 Brassica carinata HOM05D006465 ORTHO05D008207 1.8e-49 199.5 115 79.1
A10p27930 Brassica napus HOM05D006465 ORTHO05D008207 1.8e-49 199.5 114 80.7
Aa31LG3G17710 Aethionema arabicum HOM05D003132 ORTHO05D003736 2.3e-49 199.1 119 77.3
Atru.chr4.901 Acer truncatum HOM05D006465 ORTHO05D008207 3.0e-49 198.7 121 73.6
A03p04100 Brassica napus HOM05D006465 ORTHO05D008207 6.8e-49 197.6 115 79.1
BolC3t12987H Brassica oleracea HOM05D006465 ORTHO05D008207 6.8e-49 197.6 115 79.1
BraA03t09753Z Brassica rapa HOM05D006465 ORTHO05D008207 6.8e-49 197.6 115 79.1
Thhalv10014951m.g Eutrema salsugineum HOM05D006465 ORTHO05D008207 6.8e-49 197.6 143 69.9
arahy.Tifrunner.gnm1.ann1.X6LXMM Arachis hypogaea HOM05D006465 ORTHO05D008207 1.2e-48 196.8 128 72.7
Dinv07122 Davidia involucrata HOM05D006465 ORTHO05D008207 1.2e-48 196.8 110 80.0
Sed0005537 Sechium edule HOM05D006465 ORTHO05D008207 1.2e-48 196.8 147 74.8
C03p04560 Brassica napus HOM05D006465 ORTHO05D008207 1.5e-48 196.4 115 77.4
TWI75G0808 Tripterygium wilfordii HOM05D006465 ORTHO05D008207 2.6e-48 195.7 115 77.4
Hma1.2p1_0476F.1_g160840 Hydrangea macrophylla HOM05D006465 ORTHO05D008207 3.4e-48 195.3 119 77.3
TAR381G0246 Trochodendron aralioides HOM05D006465 ORTHO05D008207 3.4e-48 195.3 117 76.9
PGR119G2011 Punica granatum HOM05D006465 ORTHO05D008207 5.7e-48 194.5 118 75.4
Ah.02g121490 Amaranthus hybridus HOM05D006465 ORTHO05D008207 7.5e-48 194.1 117 76.1
AL6G19700 Arabidopsis lyrata HOM05D006465 ORTHO05D008207 7.5e-48 194.1 143 71.3
VMungo1309G0274 Vigna mungo HOM05D006465 ORTHO05D008207 7.5e-48 194.1 111 80.2
TAR625G1289 Trochodendron aralioides HOM05D006465 ORTHO05D008207 9.8e-48 193.7 113 77.9
EL10Ac6g15303 Beta vulgaris HOM05D006465 ORTHO05D008207 1.3e-47 193.4 116 76.7
CsaV3_2G018330 Cucumis sativus L. HOM05D006465 ORTHO05D008207 1.3e-47 193.4 124 75.8
GSVIVG01026483001 Vitis vinifera HOM05D006465 ORTHO05D008207 1.3e-47 193.4 114 78.9
Carub.0006s0786 Capsella rubella HOM05D006465 ORTHO05D008207 2.2e-47 192.6 143 70.6
AUR62017880 Chenopodium quinoa HOM05D006465 ORTHO05D008207 2.2e-47 192.6 119 73.9
Sp6g34010 Schrenkiella parvula HOM05D006465 ORTHO05D008207 2.8e-47 192.2 115 76.5
Actinidia06618 Actinidia chinensis HOM05D006465 ORTHO05D008207 3.7e-47 191.8 114 75.4
AT5G09310 Arabidopsis thaliana HOM05D006465 ORTHO05D008207 3.7e-47 191.8 115 76.5
arahy.Tifrunner.gnm1.ann1.Q2CXKS Arachis hypogaea HOM05D006465 ORTHO05D008207 3.7e-47 191.8 144 65.3
CARHR204090 Cardamine hirsuta HOM05D006465 ORTHO05D008207 6.3e-47 191.0 143 66.4
AUR62003565 Chenopodium quinoa HOM05D006465 ORTHO05D008207 8.3e-47 190.7 119 73.9
Nn5g28548 Nelumbo nucifera HOM05D006465 ORTHO05D008207 8.3e-47 190.7 116 75.0
Sc07g0001830 Simmondsia chinensis HOM05D006465 ORTHO05D008207 1.1e-46 190.3 108 80.6
Dinv24364 Davidia involucrata HOM05D006465 ORTHO05D008207 1.4e-46 189.9 117 74.4
ClCG02G000500 Citrullus lanatus HOM05D006465 ORTHO05D008207 3.1e-46 188.7 120 77.5
Lsat_1_v5_gn_9_25981 Lactuca sativa HOM05D006465 ORTHO05D008207 9.1e-46 187.2 122 69.7
PSO017G4081 Papaver somniferum HOM05D006465 ORTHO05D008207 1.2e-45 186.8 122 71.3
vmacro12798 Vaccinium macrocarpon HOM05D006465 ORTHO05D008207 2.0e-45 186.0 119 72.3
CSS0043698 Camellia sinensis var. sinensis HOM05D006465 ORTHO05D008207 3.5e-45 185.3 110 73.6
Lj4A839G53 Lonicera japonica HOM05D006465 ORTHO05D008207 7.7e-45 184.1 122 71.3
HanXRQChr15g0491331 Helianthus annuus HOM05D006465 ORTHO05D008207 2.3e-44 182.6 111 74.8
Aqoxy5G02229 Aquilegia oxysepala HOM05D006465 ORTHO05D000054 2.9e-44 182.2 118 72.0
FAN24G0187 Fragaria x ananassa HOM05D006465 ORTHO05D008207 5.0e-44 181.4 101 81.2
PSO170G5905 Papaver somniferum HOM05D006465 ORTHO05D008207 5.0e-44 181.4 122 68.9
CDE04G1235 Ceratophyllum demersum HOM05D006465 ORTHO05D008207 6.5e-44 181.0 118 67.8
Cc07_g18520 Coffea canephora HOM05D006465 ORTHO05D008207 1.9e-43 179.5 128 68.0
Sopen06g005870 Solanum pennellii HOM05D006465 ORTHO05D008207 5.5e-43 177.9 110 72.7
QL10p043584 Quercus lobata HOM05D006465 ORTHO05D008207 7.2e-43 177.6 162 55.6
HPP92_019397 Vanilla planifolia HOM05D006465 ORTHO05D008207 6.1e-42 174.5 117 69.2
Peaxi162Scf00270g01115 Petunia axillaris HOM05D006465 ORTHO05D008207 1.0e-41 173.7 128 64.1
Nitab4.5_0000181g0060 Nicotiana tabacum HOM05D006465 ORTHO05D008207 1.4e-41 173.3 124 66.1
Migut.L00880 Erythranthe guttata HOM05D006465 ORTHO05D008207 1.8e-41 172.9 111 70.3
Hund04414 Selenicereus undatus HOM05D006465 ORTHO05D008207 1.8e-41 172.9 166 56.0
PGSC0003DMG400030138 Solanum tuberosum HOM05D006465 ORTHO05D008207 2.3e-41 172.6 110 70.9
ECA247G0944 Erigeron canadensis HOM05D006465 ORTHO05D008207 4.0e-41 171.8 119 68.9
Migut.L00965 Erythranthe guttata HOM05D006465 ORTHO05D008207 5.2e-41 171.4 111 71.2
MELO3C023238.2 Cucumis melo HOM05D006465 ORTHO05D008207 8.9e-41 170.6 147 62.6
DCAR_014336 Daucus carota HOM05D006465 ORTHO05D008207 1.2e-40 170.2 108 69.4
FvH4_3g04510 Fragaria vesca HOM05D006465 ORTHO05D008207 1.5e-40 169.9 95 80.0
FAN11G3155 Fragaria x ananassa HOM05D006465 ORTHO05D008207 1.5e-40 169.9 95 81.1
MSTRG.3605 Avicennia marina HOM05D006465 ORTHO05D008207 2.6e-40 169.1 110 69.1
unitig_88.g27767 Utricularia gibba HOM05D006465 ORTHO05D008207 3.4e-40 168.7 117 66.7
CAN.G934.1 Capsicum annuum HOM05D006465 ORTHO05D008207 4.4e-40 168.3 110 69.1
Oeu004242.1 Olea europaea HOM05D006465 ORTHO05D008207 4.4e-40 168.3 109 70.6
SalBow7G2903 Salvia bowleyana HOM05D006465 ORTHO05D008207 8.3e-39 164.1 136 59.6
SGA_v2.0_scaffold19G08773 Striga asiatica HOM05D006465 ORTHO05D008207 4.1e-38 161.8 111 67.6
ATR0138G005 Amborella trichopoda HOM05D006465 ORTHO05D008207 2.0e-37 159.5 114 63.2
Oeu050125.1 Olea europaea HOM05D006465 ORTHO05D008207 4.5e-37 158.3 109 67.0
Os01g0960000 Oryza sativa ssp. japonica HOM05D006465 ORTHO05D008207 2.1e-34 149.4 116 59.5
Zm00001eb362550 Zea mays HOM05D006465 ORTHO05D008207 2.3e-33 146.0 113 59.3
AagrBONN_evm.TU.Sc2ySwM_117.2181 Anthoceros agrestis HOM05D006465 ORTHO05D008207 9.8e-32 140.6 113 55.8
Pp3c15_3010 Physcomitrium patens HOM05D006465 ORTHO05D008207 3.9e-28 128.6 102 58.8
MD02G1262600 Malus domestica HOM05D006465 ORTHO05D008207 7.3e-27 124.4 93 65.6
Mapoly0113s0017 Marchantia polymorpha HOM05D006465 ORTHO05D008207 9.5e-27 124.0 111 47.7
SMO367G0154 Selaginella moellendorffii HOM05D006465 ORTHO05D008207 1.9e-22 109.8 112 48.2
Potri.007G106200 Populus trichocarpa HOM05D006465 ORTHO05D008207 7.8e-21 104.4 88 60.2
SEGI_17702 Sequoiadendron giganteum HOM05D006465 ORTHO05D008207 7.8e-21 104.4 94 54.3
CDE12G0205 Ceratophyllum demersum HOM05D006465 ORTHO05D008207 4.7e-18 95.1 63 63.5
Lalb_Chr11g0068481 Lupinus albus HOM05D006465 ORTHO05D008207 6.2e-18 94.7 53 83.0
Solyc06g016760.3 Solanum lycopersicum HOM05D006465 ORTHO05D008207 1.8e-17 93.2 56 71.4
CBR_g29852 Chara braunii HOM05D006465 ORTHO05D008207 2.6e-16 89.4 107 41.1
vmacro20733 Vaccinium macrocarpon HOM05D006465 ORTHO05D008207 1.1e-14 84.0 74 54.1
Rhsim10G0133300 Rhododendron simsii HOM05D006465 ORTHO05D008207 1.9e-14 83.2 61 62.3
Lalb_Chr11g0068471 Lupinus albus HOM05D006465 ORTHO05D008207 4.1e-14 82.0 48 75.0
Cc00_g19040 Coffea canephora HOM05D006465 ORTHO05D008207 1.2e-13 80.5 49 73.5
Lj4A838T21 Lonicera japonica HOM05D006465 ORTHO05D008207 2.1e-13 79.7 51 70.6
BolC9t59563H Brassica oleracea HOM05D006465 ORTHO05D008207 2.7e-13 79.3 44 79.5
Cc00_g31500 Coffea canephora HOM05D006465 ORTHO05D008207 2.7e-13 79.3 48 72.9
Eucgr.I00202 Eucalyptus grandis HOM05D006465 ORTHO05D008207 3.5e-13 79.0 50 72.0
Cre07.g323050 Chlamydomonas reinhardtii HOM05D006465 ORTHO05D008207 1.1e-06 57.4 71 38.0


User provided reference genes

Program Settings