Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G1695 Cannabis sativa HOM05D002465 ORTHO05D008860 1.2e-121 439.9 228 100.0
CANSAT21G1380 Cannabis sativa HOM05D002465 ORTHO05D008860 2.4e-85 319.3 166 98.2
CiPaw.05G261500 Carya illinoinensis HOM05D002465 ORTHO05D008860 3.2e-66 255.8 159 82.4
MD07G1279900 Malus domestica HOM05D002465 ORTHO05D008860 4.2e-66 255.4 164 79.3
Prupe.2G302000 Prunus persica HOM05D002465 ORTHO05D008860 7.2e-66 254.6 162 81.5
QL09p012523 Quercus lobata HOM05D002465 ORTHO05D008860 1.6e-65 253.4 163 79.1
Cfa016296 Carpinus fangiana HOM05D002465 ORTHO05D008860 6.1e-65 251.5 159 81.1
Duzib205G0883 Durio zibethinus HOM05D002465 ORTHO05D008860 6.7e-64 248.1 163 75.5
COL.COLO4_30296 Corchorus olitorius HOM05D002465 ORTHO05D008860 7.4e-63 244.6 163 76.1
Thecc.03G185600 Theobroma cacao HOM05D002465 ORTHO05D008860 2.8e-62 242.7 163 75.5
Phvul.007G075300 Phaseolus vulgaris HOM05D002465 ORTHO05D008860 2.4e-61 239.6 161 77.6
Haze_00056 Corylus avellana HOM05D002465 ORTHO05D008860 5.3e-61 238.4 154 79.2
CAN.G204.25 Capsicum annuum HOM05D002465 ORTHO05D008860 9.1e-61 237.7 161 72.0
Atru.chr1.341 Acer truncatum HOM05D002465 ORTHO05D008860 1.5e-60 236.9 163 73.6
Glyma.20G163100 Glycine max HOM05D002465 ORTHO05D008860 3.5e-60 235.7 161 76.4
FvH4_7g30420 Fragaria vesca HOM05D002465 ORTHO05D008860 4.5e-60 235.3 162 77.8
FAN01G0734 Fragaria x ananassa HOM05D002465 ORTHO05D008860 4.5e-60 235.3 162 77.8
FAN06G0587 Fragaria x ananassa HOM05D002465 ORTHO05D008860 4.5e-60 235.3 162 77.8
FAN06G4105 Fragaria x ananassa HOM05D002465 ORTHO05D008860 5.9e-60 235.0 162 77.8
FAN03G2954 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.0e-59 234.2 162 77.2
Medtr1g099620 Medicago truncatula HOM05D002465 ORTHO05D008860 1.3e-59 233.8 163 75.5
FAN10G1848 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.7e-59 233.4 162 77.2
Lj5g0014102 Lotus japonicus HOM05D002465 ORTHO05D008860 1.7e-59 233.4 162 73.5
VMungo0720G1208 Vigna mungo HOM05D002465 ORTHO05D008860 1.7e-59 233.4 161 74.5
Ciclev10006645m.g Citrus clementina HOM05D002465 ORTHO05D008860 8.5e-59 231.1 157 73.9
FAN10G3921 Fragaria x ananassa HOM05D002465 ORTHO05D008860 8.5e-59 231.1 162 76.5
Lalb_Chr02g0141271 Lupinus albus HOM05D002465 ORTHO05D008860 8.5e-59 231.1 161 73.9
Peaxi162Scf00618g00066 Petunia axillaris HOM05D002465 ORTHO05D008860 8.5e-59 231.1 161 71.4
TPR.G7770 Trifolium pratense HOM05D002465 ORTHO05D008860 8.5e-59 231.1 165 74.5
Ca_10714_v3 Cicer arietinum L. HOM05D002465 ORTHO05D008860 1.9e-58 229.9 164 72.0
Cc02_g02280 Coffea canephora HOM05D002465 ORTHO05D008860 2.5e-58 229.6 165 69.7
Potri.004G072500 Populus trichocarpa HOM05D002465 ORTHO05D008860 3.2e-58 229.2 164 72.6
Cpa.g.sc107.122 Carica papaya HOM05D002465 ORTHO05D008860 9.4e-58 227.6 157 70.7
arahy.Tifrunner.gnm1.ann1.9T5AB0 Arachis hypogaea HOM05D002465 ORTHO05D008860 1.2e-57 227.3 163 72.4
Psat6g195800 Pisum sativum HOM05D002465 ORTHO05D008860 1.2e-57 227.3 161 73.9
PGSC0003DMG400037424 Solanum tuberosum HOM05D002465 ORTHO05D008860 1.6e-57 226.9 161 70.8
PGSC0003DMG402028895 Solanum tuberosum HOM05D002465 ORTHO05D008860 1.6e-57 226.9 161 70.8
Gohir.D12G255800 Gossypium hirsutum HOM05D002465 ORTHO05D008860 8.0e-57 224.6 162 71.0
Gohir.A12G253500 Gossypium hirsutum HOM05D002465 ORTHO05D008860 1.0e-56 224.2 162 71.0
arahy.Tifrunner.gnm1.ann1.R026RD Arachis hypogaea HOM05D002465 ORTHO05D008860 3.9e-56 222.2 164 72.0
Gorai.008G273900 Gossypium raimondii HOM05D002465 ORTHO05D008860 3.9e-56 222.2 162 69.8
Ah.07g206480 Amaranthus hybridus HOM05D002465 ORTHO05D008860 5.2e-56 221.9 165 67.9
DCAR_014522 Daucus carota HOM05D002465 ORTHO05D008860 5.2e-56 221.9 159 73.0
EL10Ac3g05401 Beta vulgaris HOM05D002465 ORTHO05D008860 6.7e-56 221.5 163 69.9
Sabra04G0047800 Salix brachista HOM05D002465 ORTHO05D008860 6.7e-56 221.5 164 70.1
Sopen06g012110 Solanum pennellii HOM05D002465 ORTHO05D008860 6.7e-56 221.5 161 68.3
Solyc06g036330.1 Solanum lycopersicum HOM05D002465 ORTHO05D008860 8.8e-56 221.1 161 67.7
Manes.14G021500 Manihot esculenta HOM05D002465 ORTHO05D008860 1.5e-55 220.3 162 70.4
Nn6g32108 Nelumbo nucifera HOM05D002465 ORTHO05D008860 2.0e-55 219.9 160 68.8
Nn6g32109 Nelumbo nucifera HOM05D002465 ORTHO05D008860 2.0e-55 219.9 160 68.8
AUR62021108 Chenopodium quinoa HOM05D002465 ORTHO05D008860 4.4e-55 218.8 163 71.2
AUR62031433 Chenopodium quinoa HOM05D002465 ORTHO05D008860 4.4e-55 218.8 163 71.2
TWI23G0306 Tripterygium wilfordii HOM05D002465 ORTHO05D008860 4.4e-55 218.8 163 69.9
MBI11_g09066_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D008860 1.3e-54 217.2 158 70.9
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 1.7e-54 216.9 160 68.8
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 1.7e-54 216.9 160 68.8
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 2.8e-54 216.1 160 68.1
Sed0017948 Sechium edule HOM05D002465 ORTHO05D008860 3.7e-54 215.7 161 70.2
QL09p012480 Quercus lobata HOM05D002465 ORTHO05D008860 6.3e-54 214.9 130 82.3
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 8.2e-54 214.5 160 66.9
CSS0010708 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D008860 1.8e-53 213.4 162 69.1
Aqoxy5G00658 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 7.0e-53 211.5 164 64.6
Carub.0008s1297 Capsella rubella HOM05D002465 ORTHO05D008860 7.0e-53 211.5 162 65.4
BcaB05g21982 Brassica carinata HOM05D002465 ORTHO05D008860 1.2e-52 210.7 162 64.8
Sc13g0009250 Simmondsia chinensis HOM05D002465 ORTHO05D008860 1.6e-52 210.3 165 63.6
THA.LOC104811948 Tarenaya hassleriana HOM05D002465 ORTHO05D008860 1.6e-52 210.3 162 64.2
Aa31LG3G9050 Aethionema arabicum HOM05D002465 ORTHO05D008860 2.6e-52 209.5 160 65.6
ClCG05G008460 Citrullus lanatus HOM05D002465 ORTHO05D008860 3.5e-52 209.1 162 66.7
AL8G27240 Arabidopsis lyrata HOM05D002465 ORTHO05D008860 1.7e-51 206.8 159 65.4
CARHR265740 Cardamine hirsuta HOM05D002465 ORTHO05D008860 2.9e-51 206.1 162 64.2
Thhalv10014103m.g Eutrema salsugineum HOM05D002465 ORTHO05D008860 3.8e-51 205.7 162 64.2
AT5G52810 Arabidopsis thaliana HOM05D002465 ORTHO05D008860 1.1e-50 204.1 162 61.1
CsaV3_3G017540 Cucumis sativus L. HOM05D002465 ORTHO05D008860 1.1e-50 204.1 159 69.2
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 1.5e-50 203.8 162 63.0
Migut.F01082 Erythranthe guttata HOM05D002465 ORTHO05D008860 1.9e-50 203.4 162 66.7
SalBow2G2390 Salvia bowleyana HOM05D002465 ORTHO05D008860 4.2e-50 202.2 160 65.6
MELO3C006954.2 Cucumis melo HOM05D002465 ORTHO05D008860 5.5e-50 201.8 160 66.2
Dinv35265 Davidia involucrata HOM05D002465 ORTHO05D008860 6.1e-49 198.4 141 75.9
Actinidia08586 Actinidia chinensis HOM05D002465 ORTHO05D008860 8.0e-49 198.0 163 62.6
PSO478G0039 Papaver somniferum HOM05D002465 ORTHO05D008860 2.3e-48 196.4 164 62.2
PGR142G3674 Punica granatum HOM05D002465 ORTHO05D008860 2.0e-47 193.4 161 65.2
HanXRQChr07g0206921 Helianthus annuus HOM05D002465 ORTHO05D008860 2.6e-47 193.0 161 61.5
BcaC03g14498 Brassica carinata HOM05D002465 ORTHO05D008860 4.4e-47 192.2 160 62.5
Lsat_1_v5_gn_2_131440 Lactuca sativa HOM05D002465 ORTHO05D008860 5.7e-47 191.8 160 64.4
Nitab4.5_0016317g0010 Nicotiana tabacum HOM05D002465 ORTHO05D008860 5.7e-47 191.8 129 72.9
Nitab4.5_0004854g0030 Nicotiana tabacum HOM05D002465 ORTHO05D008860 7.5e-47 191.4 127 74.0
Eucgr.L01486 Eucalyptus grandis HOM05D002465 ORTHO05D008860 6.3e-46 188.3 163 65.0
ECA238G0507 Erigeron canadensis HOM05D002465 ORTHO05D008860 4.1e-45 185.7 158 62.7
Os10g0533200 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D008860 1.3e-43 180.6 160 57.5
SEGI_38444 Sequoiadendron giganteum HOM05D002465 ORTHO05D008860 2.5e-42 176.4 162 59.3
TAR374G0466 Trochodendron aralioides HOM05D002465 ORTHO05D008860 7.2e-42 174.9 165 55.8
Zm00001eb021880 Zea mays HOM05D002465 ORTHO05D008860 1.2e-41 174.1 160 56.9
SGA_v2.0_scaffold10G05284 Striga asiatica HOM05D002465 ORTHO05D008860 3.6e-41 172.6 166 57.8
Aqoxy5G00661 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 5.7e-39 165.2 113 70.8
Aqoxy5G00666 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 7.5e-39 164.9 113 70.8
Glyma.10G230300 Glycine max HOM05D002465 ORTHO05D008860 3.7e-38 162.5 112 74.1
HPP92_015083 Vanilla planifolia HOM05D002465 ORTHO05D008860 1.8e-37 160.2 163 54.0
HPP92_028539 Vanilla planifolia HOM05D002465 ORTHO05D008860 1.8e-37 160.2 163 54.0
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 1.6e-36 157.1 165 56.4
ATR0661G059 Amborella trichopoda HOM05D002465 ORTHO05D008860 4.5e-36 155.6 165 54.5
vmacro06619 Vaccinium macrocarpon HOM05D002465 ORTHO05D008860 4.5e-36 155.6 164 54.3
Cfa016297 Carpinus fangiana HOM05D002465 ORTHO05D008860 1.6e-33 147.1 86 86.0
Mapoly0033s0116 Marchantia polymorpha HOM05D002465 ORTHO05D008860 9.8e-31 137.9 162 46.3
CDE07G0391 Ceratophyllum demersum HOM05D002465 ORTHO05D008860 5.0e-27 125.6 162 42.0
unitig_26.g10201 Utricularia gibba HOM05D002465 ORTHO05D008860 5.0e-27 125.6 103 65.0
AagrBONN_evm.TU.Sc2ySwM_362.356 Anthoceros agrestis HOM05D002465 ORTHO05D008860 1.7e-22 110.5 114 50.9
Pp3c1_3280 Physcomitrium patens HOM05D002465 ORTHO05D008860 6.0e-20 102.1 120 45.0
Actinidia34162 Actinidia chinensis HOM05D002465 ORTHO05D008860 4.4e-15 85.9 83 60.2
Pp3s46_180 Physcomitrium patens HOM05D002465 ORTHO05D028651 2.7e-12 76.6 158 26.6
CANSAT54G2668 Cannabis sativa HOM05D019233 ORTHO05D019572 3.5e-12 76.3 47 89.4
CANSAT25G0677 Cannabis sativa HOM05D019233 ORTHO05D019572 1.3e-11 74.3 58 67.2
CANSAT78G0469 Cannabis sativa HOM05D019233 ORTHO05D019572 7.3e-10 68.6 58 72.4
Cfa016299 Carpinus fangiana HOM05D002465 ORTHO05D008860 1.1e-08 64.7 88 48.9


User provided reference genes

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