Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT01G0573 Cannabis sativa HOM05D004413 ORTHO05D005199 6.1e-236 820.5 425 100.0
CANSAT01G1789 Cannabis sativa HOM05D004413 ORTHO05D005199 5.2e-235 817.4 425 99.5
CANSAT64G0940 Cannabis sativa HOM05D004413 ORTHO05D005199 2.8e-172 609.0 438 71.7
MD07G1003300 Malus domestica HOM05D004413 ORTHO05D005199 5.9e-138 495.0 418 61.7
MD02G1318000 Malus domestica HOM05D004413 ORTHO05D005199 1.5e-133 480.3 423 59.1
RcHm_v2.0_Chr7g0230361 Rosa chinensis HOM05D004413 ORTHO05D005199 1.7e-132 476.9 418 60.8
QL04p000397 Quercus lobata HOM05D004413 ORTHO05D005199 1.1e-131 474.2 481 55.3
QL04p002426 Quercus lobata HOM05D004413 ORTHO05D005199 4.5e-130 468.8 459 57.1
FAN18G0644 Fragaria x ananassa HOM05D004413 ORTHO05D005199 1.0e-129 467.6 418 58.9
Haze_03259 Corylus avellana HOM05D004413 ORTHO05D005199 5.0e-129 465.3 423 59.3
Cfa010719 Carpinus fangiana HOM05D004413 ORTHO05D005199 1.9e-128 463.4 422 60.0
FAN13G1137 Fragaria x ananassa HOM05D004413 ORTHO05D005199 2.5e-128 463.0 418 58.6
FvH4_5g32720 Fragaria vesca HOM05D004413 ORTHO05D005199 1.6e-127 460.3 418 58.4
Manes.10G150400 Manihot esculenta HOM05D004413 ORTHO05D005199 8.0e-127 458.0 439 55.8
Ciclev10031642m.g Citrus clementina HOM05D004413 ORTHO05D005199 1.4e-126 457.2 424 57.8
FAN08G0618 Fragaria x ananassa HOM05D004413 ORTHO05D005199 2.6e-125 453.0 427 56.9
Gohir.A08G146400 Gossypium hirsutum HOM05D004413 ORTHO05D005199 4.8e-124 448.7 426 58.0
TWI09G1219 Tripterygium wilfordii HOM05D004413 ORTHO05D005199 6.3e-124 448.4 430 56.3
COL.COLO4_30064 Corchorus olitorius HOM05D004413 ORTHO05D005199 1.2e-122 444.1 433 57.7
Thecc.01G415800 Theobroma cacao HOM05D004413 ORTHO05D005199 1.7e-121 440.3 433 55.4
Gohir.D08G167400 Gossypium hirsutum HOM05D004413 ORTHO05D005199 2.2e-121 439.9 426 57.3
Gorai.004G174800 Gossypium raimondii HOM05D004413 ORTHO05D005199 3.8e-121 439.1 426 57.3
Duzib138G1189 Durio zibethinus HOM05D004413 ORTHO05D005199 5.0e-121 438.7 430 57.4
Gohir.A01G019401 Gossypium hirsutum HOM05D004413 ORTHO05D005199 6.5e-121 438.3 396 58.6
Gohir.A08G005500 Gossypium hirsutum HOM05D004413 ORTHO05D005199 3.2e-120 436.0 426 56.8
GSVIVG01001402001 Vitis vinifera HOM05D004413 ORTHO05D005199 3.6e-119 432.6 415 54.0
Potri.001G228000 Populus trichocarpa HOM05D004413 ORTHO05D005199 2.3e-118 429.9 425 54.4
Atru.chr11.2687 Acer truncatum HOM05D004413 ORTHO05D005199 6.8e-118 428.3 424 55.4
Prupe.2G005000 Prunus persica HOM05D004413 ORTHO05D005199 1.7e-116 423.7 420 56.0
CSS0018065 Camellia sinensis var. sinensis HOM05D004413 ORTHO05D005199 3.5e-114 416.0 377 57.8
arahy.Tifrunner.gnm1.ann1.8FHU3N Arachis hypogaea HOM05D004413 ORTHO05D005199 4.5e-114 415.6 418 54.8
Glyma.09G152600 Glycine max HOM05D004413 ORTHO05D005199 4.5e-114 415.6 423 53.0
CiPaw.16G012500 Carya illinoinensis HOM05D004413 ORTHO05D005199 3.8e-113 412.5 399 56.9
arahy.Tifrunner.gnm1.ann1.X2RX6E Arachis hypogaea HOM05D004413 ORTHO05D005199 2.5e-112 409.8 418 54.1
Glyma.16G203400 Glycine max HOM05D004413 ORTHO05D005199 3.3e-112 409.5 424 53.1
THA.LOC104826126 Tarenaya hassleriana HOM05D004413 ORTHO05D005199 7.2e-112 408.3 393 55.0
MSTRG.28094 Avicennia marina HOM05D004413 ORTHO05D005199 1.2e-111 407.5 380 55.5
Sabra16G0135900 Salix brachista HOM05D004413 ORTHO05D005199 3.6e-111 406.0 439 52.6
TAR636G2532 Trochodendron aralioides HOM05D004413 ORTHO05D005199 4.7e-111 405.6 440 52.5
Lalb_Chr19g0124241 Lupinus albus HOM05D004413 ORTHO05D005199 6.1e-111 405.2 420 51.7
Cpa.g.sc189.31 Carica papaya HOM05D004413 ORTHO05D005199 8.0e-111 404.8 386 55.2
Aa31LG1G19950 Aethionema arabicum HOM05D004413 ORTHO05D005199 4.0e-110 402.5 391 54.7
Carub.0001s0418 Capsella rubella HOM05D004413 ORTHO05D005199 5.2e-110 402.1 378 54.5
Lj2g0027526 Lotus japonicus HOM05D004413 ORTHO05D005199 6.8e-110 401.7 374 57.0
vmacro21162 Vaccinium macrocarpon HOM05D004413 ORTHO05D005199 2.0e-109 400.2 458 50.2
ClCG09G003830 Citrullus lanatus HOM05D004413 ORTHO05D005199 1.7e-108 397.1 424 50.2
Sed0007945 Sechium edule HOM05D004413 ORTHO05D005199 1.4e-107 394.0 426 50.5
Oeu013591.1 Olea europaea HOM05D004413 ORTHO05D005199 4.1e-107 392.5 377 54.4
PGR031G3941 Punica granatum HOM05D004413 ORTHO05D005199 5.4e-107 392.1 374 53.5
Ca_02163_v3 Cicer arietinum L. HOM05D004413 ORTHO05D005199 1.6e-106 390.6 425 49.9
TPR.G25309 Trifolium pratense HOM05D004413 ORTHO05D005199 1.6e-106 390.6 375 54.9
Phvul.004G126300 Phaseolus vulgaris HOM05D004413 ORTHO05D005199 1.7e-105 387.1 433 48.7
Sc17g0005470 Simmondsia chinensis HOM05D004413 ORTHO05D005199 1.7e-105 387.1 369 53.7
CsaV3_7G031400 Cucumis sativus L. HOM05D004413 ORTHO05D005199 4.3e-104 382.5 424 50.0
VMungo0464G1648 Vigna mungo HOM05D004413 ORTHO05D005199 1.2e-103 380.9 423 48.5
Dinv43918 Davidia involucrata HOM05D004413 ORTHO05D005199 2.1e-103 380.2 383 54.8
Medtr6g463300 Medicago truncatula HOM05D004413 ORTHO05D005199 2.1e-103 380.2 426 50.7
AT1G04945 Arabidopsis thaliana HOM05D004413 ORTHO05D005199 3.6e-103 379.4 423 49.4
Sp1g03790 Schrenkiella parvula HOM05D004413 ORTHO05D005199 3.6e-103 379.4 425 48.5
Rhsim01G0132100 Rhododendron simsii HOM05D004413 ORTHO05D005199 6.1e-103 378.6 498 45.2
Thhalv10007024m.g Eutrema salsugineum HOM05D004413 ORTHO05D005199 5.2e-102 375.6 437 47.8
GSVIVG01037065001 Vitis vinifera HOM05D004413 ORTHO05D005199 2.0e-101 373.6 272 64.0
Lalb_Chr19g0124231 Lupinus albus HOM05D004413 ORTHO05D005199 3.4e-101 372.9 294 60.5
AL1G14670 Arabidopsis lyrata HOM05D004413 ORTHO05D005199 5.8e-101 372.1 424 48.1
BcaC07g36870 Brassica carinata HOM05D004413 ORTHO05D005199 9.8e-101 371.3 426 48.1
Migut.N01644 Erythranthe guttata HOM05D004413 ORTHO05D005199 1.7e-100 370.5 385 50.4
Cc02_g27150 Coffea canephora HOM05D004413 ORTHO05D005199 4.9e-100 369.0 387 52.7
AUR62016087 Chenopodium quinoa HOM05D004413 ORTHO05D005199 8.3e-100 368.2 373 51.5
C08p01610 Brassica napus HOM05D004413 ORTHO05D005199 1.1e-99 367.9 436 47.5
BolC8t46964H Brassica oleracea HOM05D004413 ORTHO05D005199 1.1e-99 367.9 436 47.5
TPR.G37653 Trifolium pratense HOM05D004413 ORTHO05D005199 1.1e-99 367.9 418 50.0
AUR62035034 Chenopodium quinoa HOM05D004413 ORTHO05D005199 1.9e-99 367.1 371 52.0
Sed0010518 Sechium edule HOM05D004413 ORTHO05D005199 1.9e-99 367.1 424 47.9
CARHR004350 Cardamine hirsuta HOM05D004413 ORTHO05D005199 4.1e-99 365.9 421 47.5
SGA_v2.0_scaffold95G28780 Striga asiatica HOM05D004413 ORTHO05D005199 4.1e-99 365.9 391 52.9
Nn3g19386 Nelumbo nucifera HOM05D004413 ORTHO05D005199 6.0e-98 362.1 406 50.0
A08p36630 Brassica napus HOM05D004413 ORTHO05D005199 7.8e-98 361.7 436 47.7
BraA08t35565Z Brassica rapa HOM05D004413 ORTHO05D005199 7.8e-98 361.7 436 47.7
Aqoxy2G00074 Aquilegia oxysepala HOM05D004413 ORTHO05D005199 2.3e-97 360.1 391 50.6
Hund04656 Selenicereus undatus HOM05D004413 ORTHO05D005199 1.1e-96 357.8 398 50.3
Nitab4.5_0001006g0010 Nicotiana tabacum HOM05D004413 ORTHO05D005199 1.5e-96 357.5 357 53.5
EL10Ac3g05776 Beta vulgaris HOM05D004413 ORTHO05D005199 1.9e-96 357.1 386 50.0
Psat1g110760 Pisum sativum HOM05D004413 ORTHO05D005199 2.5e-96 356.7 311 59.2
CAN.G1393.6 Capsicum annuum HOM05D004413 ORTHO05D005199 9.5e-96 354.8 291 58.8
Lj9A624G21 Lonicera japonica HOM05D004413 ORTHO05D005199 2.8e-95 353.2 393 50.1
Psat6g015760 Pisum sativum HOM05D004413 ORTHO05D005199 2.8e-95 353.2 311 58.8
BcaB03g13464 Brassica carinata HOM05D004413 ORTHO05D005199 3.6e-95 352.8 426 46.2
Nitab4.5_0000346g0070 Nicotiana tabacum HOM05D004413 ORTHO05D005199 8.0e-95 351.7 320 56.2
arahy.Tifrunner.gnm1.ann1.0XNQ2B Arachis hypogaea HOM05D004413 ORTHO05D005199 6.8e-94 348.6 379 49.1
Lsat_1_v5_gn_4_46341 Lactuca sativa HOM05D004413 ORTHO05D005199 1.5e-93 347.4 424 47.4
Atru.chr1.1383 Acer truncatum HOM05D004413 ORTHO05D005199 9.8e-93 344.7 279 59.1
CDE04G1207 Ceratophyllum demersum HOM05D004413 ORTHO05D005199 9.8e-93 344.7 445 44.0
Solyc01g074020.3 Solanum lycopersicum HOM05D004413 ORTHO05D005199 2.2e-92 343.6 360 50.8
Peaxi162Scf01343g00011 Petunia axillaris HOM05D004413 ORTHO05D005199 1.9e-91 340.5 399 49.9
arahy.Tifrunner.gnm1.ann1.MVM3BY Arachis hypogaea HOM05D004413 ORTHO05D005199 2.7e-90 336.7 373 48.3
MELO3C023518.2 Cucumis melo HOM05D004413 ORTHO05D005199 1.7e-89 334.0 421 46.3
CDE12G0144 Ceratophyllum demersum HOM05D004413 ORTHO05D005199 6.6e-89 332.0 448 42.2
Hma1.2p1_0038F.1_g024150 Hydrangea macrophylla HOM05D004413 ORTHO05D005199 1.6e-87 327.4 422 45.5
PSO210G4410 Papaver somniferum HOM05D004413 ORTHO05D005199 6.2e-87 325.5 392 48.2
PSO210G0136 Papaver somniferum HOM05D004413 ORTHO05D005199 2.0e-85 320.5 379 47.5
BcaC08g43081 Brassica carinata HOM05D004413 ORTHO05D005199 2.2e-84 317.0 277 56.0
SHI15877 Sapria himalayana HOM05D004413 ORTHO05D005199 3.7e-84 316.2 417 44.1
Ah.07g208370 Amaranthus hybridus HOM05D004413 ORTHO05D005199 8.3e-84 315.1 391 45.8
C06p03410 Brassica napus HOM05D004413 ORTHO05D005199 2.4e-83 313.5 277 55.6
BolC6t35480H Brassica oleracea HOM05D004413 ORTHO05D005199 2.4e-83 313.5 277 55.6
HanXRQChr16g0520481 Helianthus annuus HOM05D004413 ORTHO05D005199 5.4e-83 312.4 535 37.9
PSO170G4481 Papaver somniferum HOM05D004413 ORTHO05D005199 7.1e-83 312.0 383 46.7
A06p04180 Brassica napus HOM05D004413 ORTHO05D005199 3.0e-81 306.6 278 54.7
BraA06t23623Z Brassica rapa HOM05D004413 ORTHO05D005199 3.0e-81 306.6 278 54.7
HPP92_005742 Vanilla planifolia HOM05D004413 ORTHO05D005199 1.6e-79 300.8 397 43.8
Gohir.A11G220500 Gossypium hirsutum HOM05D004413 ORTHO05D005199 3.1e-70 270.0 307 50.8
PGSC0003DMG400006318 Solanum tuberosum HOM05D004413 ORTHO05D005199 2.0e-69 267.3 224 58.5
Os01g0962500 Oryza sativa ssp. japonica HOM05D004413 ORTHO05D005199 1.4e-67 261.2 330 45.2
ATR0582G367 Amborella trichopoda HOM05D004413 ORTHO05D005199 4.2e-67 259.6 420 39.0
Actinidia21569 Actinidia chinensis HOM05D004413 ORTHO05D005199 1.0e-65 255.0 278 51.4
unitig_578.g16701 Utricularia gibba HOM05D004413 ORTHO05D005199 3.9e-65 253.1 245 49.8
Zm00001eb140340 Zea mays HOM05D004413 ORTHO05D005199 3.3e-64 250.0 375 41.1
Lj9A625T17 Lonicera japonica HOM05D004413 ORTHO05D005199 1.1e-62 245.0 334 44.9
SEGI_33976 Sequoiadendron giganteum HOM05D004413 ORTHO05D005199 1.1e-62 245.0 288 44.1
ECA234G1090 Erigeron canadensis HOM05D004413 ORTHO05D005199 1.4e-59 234.6 355 41.7
SGA_v2.0_scaffold4G02237 Striga asiatica HOM05D004413 ORTHO05D005199 4.8e-55 219.5 199 56.3
Dinv43485 Davidia involucrata HOM05D004413 ORTHO05D005199 1.1e-54 218.4 167 61.1
SMO351G0528 Selaginella moellendorffii HOM05D004413 ORTHO05D005199 1.2e-53 214.9 282 39.4
Mapoly0103s0075 Marchantia polymorpha HOM05D004413 ORTHO05D005199 4.6e-50 203.0 286 39.5
Pp3c11_18200 Physcomitrium patens HOM05D004413 ORTHO05D005199 8.7e-49 198.7 281 38.4
GSVIVG01027705001 Vitis vinifera HOM05D004413 ORTHO05D005199 2.0e-45 187.6 126 69.0
Cre01.g049400 Chlamydomonas reinhardtii HOM05D004413 ORTHO05D005199 2.2e-44 184.1 242 39.7
PSO170G2986 Papaver somniferum HOM05D004413 ORTHO05D005199 3.8e-44 183.3 257 42.4
DCAR_015691 Daucus carota HOM05D004413 ORTHO05D005199 1.4e-43 181.4 134 64.9
Sopen01g033580 Solanum pennellii HOM05D004413 ORTHO05D005199 4.2e-43 179.9 123 68.3
AagrBONN_evm.TU.Sc2ySwM_228.625 Anthoceros agrestis HOM05D004413 ORTHO05D005199 2.1e-42 177.6 280 37.9
Sopen01g033590 Solanum pennellii HOM05D004413 ORTHO05D005199 6.7e-41 172.6 181 50.8
CBR_g50781 Chara braunii HOM05D004413 ORTHO05D005199 2.5e-40 170.6 243 35.8
Actinidia21570 Actinidia chinensis HOM05D004413 ORTHO05D005199 1.4e-35 154.8 101 69.3
Aa31LG1G19980 Aethionema arabicum HOM05D004413 ORTHO05D005199 1.5e-32 144.8 144 55.6
SEGI_03996 Sequoiadendron giganteum HOM05D004413 ORTHO05D005199 7.4e-32 142.5 184 38.0
SEGI_10444 Sequoiadendron giganteum HOM05D004413 ORTHO05D005199 9.7e-32 142.1 184 38.6
GSVIVG01027710001 Vitis vinifera HOM05D004413 ORTHO05D005199 1.3e-31 141.7 106 65.1
Actinidia15863 Actinidia chinensis HOM05D004413 ORTHO05D005199 3.8e-28 130.2 85 71.8
QL04p000430 Quercus lobata HOM05D004413 ORTHO05D005199 2.7e-26 124.0 229 38.0
A08p37250 Brassica napus HOM05D004413 ORTHO05D005199 4.4e-24 116.7 72 72.2
BraA09t42095Z Brassica rapa HOM05D004413 ORTHO05D005199 1.3e-23 115.2 107 48.6
MCO07G333 Micromonas commoda HOM05D004413 ORTHO05D005199 2.2e-23 114.4 265 30.2
DCAR_015690 Daucus carota HOM05D004413 ORTHO05D005199 2.6e-21 107.5 197 38.1
GSVIVG01018194001 Vitis vinifera HOM05D004413 ORTHO05D005199 1.9e-19 101.3 68 60.3
HanXRQChr11g0328201 Helianthus annuus HOM05D004413 ORTHO05D005199 2.5e-19 100.9 64 71.9
GSVIVG01027698001 Vitis vinifera HOM05D004413 ORTHO05D005199 4.2e-19 100.1 63 66.7
PRCOL_00005718 Prasinoderma coloniale HOM05D004413 ORTHO05D005199 5.5e-19 99.8 313 26.2
Manes.10G149900 Manihot esculenta HOM05D000073 ORTHO05D000033 2.1e-18 97.8 78 61.5
Actinidia15864 Actinidia chinensis HOM05D004413 ORTHO05D005199 3.3e-16 90.5 128 40.6
TWI73G0758 Tripterygium wilfordii HOM05D004413 ORTHO05D005199 1.4e-14 85.1 96 50.0
TAR633G2579 Trochodendron aralioides HOM05D004413 ORTHO05D005199 1.4e-14 85.1 94 45.7
GSVIVG01027696001 Vitis vinifera HOM05D004413 ORTHO05D005199 1.2e-13 82.0 59 61.0
GSVIVG01027714001 Vitis vinifera HOM05D004413 ORTHO05D005199 3.5e-13 80.5 165 36.4
Nitab4.5_0003792g0060 Nicotiana tabacum HOM05D004413 ORTHO05D005199 3.6e-10 70.5 75 48.0
GSVIVG01012403001 Vitis vinifera HOM05D004413 ORTHO05D005199 6.1e-10 69.7 53 60.4
GSVIVG01026105001 Vitis vinifera HOM05D004413 ORTHO05D005199 6.1e-10 69.7 53 60.4
Atru.chr1.1384 Acer truncatum HOM05D004413 ORTHO05D005199 6.3e-07 59.7 109 44.0
Hma1.2p1_0276F.1_g111190 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 4.1e-06 57.0 46 47.8


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