Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G992.27 Capsicum annuum HOM05D000007 ORTHO05D000521 1.4e-71 272.7 129 100.0
CAN.G222.88 Capsicum annuum HOM05D000007 ORTHO05D000521 7.4e-60 233.8 126 89.7
CAN.G222.102 Capsicum annuum HOM05D000007 ORTHO05D000521 6.3e-59 230.7 126 88.9
CAN.G222.91 Capsicum annuum HOM05D000007 ORTHO05D000521 1.8e-58 229.2 126 87.3
CAN.G97.28 Capsicum annuum HOM05D000007 ORTHO05D000521 7.9e-54 213.8 125 84.0
CAN.G222.79 Capsicum annuum HOM05D000007 ORTHO05D000521 3.9e-53 211.5 122 86.1
CAN.G506.5 Capsicum annuum HOM05D000007 ORTHO05D000521 5.3e-50 201.1 126 78.6
CAN.G222.120 Capsicum annuum HOM05D000007 ORTHO05D000521 3.0e-29 132.1 74 86.5
CAN.G222.116 Capsicum annuum HOM05D000007 ORTHO05D000521 8.8e-29 130.6 124 59.7
Nitab4.5_0006347g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000521 9.8e-28 127.1 124 57.3
Nitab4.5_0000259g0320 Nicotiana tabacum HOM05D000007 ORTHO05D000521 1.8e-26 122.9 129 51.9
PGSC0003DMG400015610 Solanum tuberosum HOM05D000007 ORTHO05D000521 2.4e-26 122.5 137 50.4
PGSC0003DMG400025100 Solanum tuberosum HOM05D000007 ORTHO05D000521 9.2e-26 120.6 130 53.8
PGSC0003DMG400046639 Solanum tuberosum HOM05D000007 ORTHO05D000521 5.9e-25 117.9 94 62.8
Peaxi162Scf00376g00044 Petunia axillaris HOM05D000007 ORTHO05D000521 1.3e-24 116.7 101 61.4
Peaxi162Scf00376g00068 Petunia axillaris HOM05D000007 ORTHO05D000521 2.3e-24 115.9 138 50.7
Peaxi162Scf00583g00119 Petunia axillaris HOM05D000007 ORTHO05D000521 2.3e-24 115.9 127 53.5
Peaxi162Scf00376g00064 Petunia axillaris HOM05D000007 ORTHO05D000521 6.6e-24 114.4 113 54.0
CAN.G184.40 Capsicum annuum HOM05D000007 ORTHO05D000521 8.6e-24 114.0 120 52.5
Peaxi162Scf00583g00011 Petunia axillaris HOM05D000007 ORTHO05D000521 1.1e-23 113.6 127 52.8
PGSC0003DMG400036030 Solanum tuberosum HOM05D000007 ORTHO05D000521 1.1e-23 113.6 93 60.2
PGSC0003DMG400036974 Solanum tuberosum HOM05D000007 ORTHO05D000521 1.1e-23 113.6 120 55.0
PGSC0003DMG400040165 Solanum tuberosum HOM05D000007 ORTHO05D000521 1.5e-23 113.2 92 63.0
Peaxi162Scf00376g00061 Petunia axillaris HOM05D000007 ORTHO05D000521 2.5e-23 112.5 92 63.0
PGSC0003DMG400045529 Solanum tuberosum HOM05D000007 ORTHO05D000521 1.6e-22 109.8 120 52.5
Nitab4.5_0000259g0340 Nicotiana tabacum HOM05D000007 ORTHO05D000521 3.6e-22 108.6 128 50.0
PGSC0003DMG400025124 Solanum tuberosum HOM05D000007 ORTHO05D000521 8.0e-22 107.5 127 51.2
PGSC0003DMG400046868 Solanum tuberosum HOM05D000007 ORTHO05D000521 8.0e-22 107.5 120 48.3
CAN.G680.1 Capsicum annuum HOM05D000007 ORTHO05D000521 1.8e-21 106.3 127 51.2
PGSC0003DMG400044925 Solanum tuberosum HOM05D000007 ORTHO05D000521 1.8e-21 106.3 94 60.6
PGSC0003DMG400045521 Solanum tuberosum HOM05D000007 ORTHO05D000521 3.0e-21 105.5 120 49.2
PGSC0003DMG400037423 Solanum tuberosum HOM05D000007 ORTHO05D000521 6.8e-21 104.4 90 61.1
Nitab4.5_0000259g0350 Nicotiana tabacum HOM05D000007 ORTHO05D000521 4.4e-20 101.7 87 65.5
PGSC0003DMG400044791 Solanum tuberosum HOM05D000007 ORTHO05D000521 1.3e-19 100.1 102 55.9
Solyc05g010490.1 Solanum lycopersicum HOM05D000007 ORTHO05D000521 2.2e-19 99.4 92 55.4
Peaxi162Scf00583g00121 Petunia axillaris HOM05D000007 ORTHO05D000521 2.9e-19 99.0 124 48.4
CAN.G184.10 Capsicum annuum HOM05D000007 ORTHO05D000521 3.7e-19 98.6 127 45.7
Solyc05g010220.2 Solanum lycopersicum HOM05D000007 ORTHO05D000676 3.7e-19 98.6 123 49.6
CAN.G184.11 Capsicum annuum HOM05D000007 ORTHO05D000521 8.3e-19 97.4 117 49.6
Peaxi162Scf00583g00110 Petunia axillaris HOM05D000007 ORTHO05D000521 1.4e-18 96.7 119 49.6
PGSC0003DMG400042211 Solanum tuberosum HOM05D000007 ORTHO05D000521 5.4e-18 94.7 78 61.5
Solyc05g010500.1 Solanum lycopersicum HOM05D000007 ORTHO05D000521 9.2e-18 94.0 91 53.8
Peaxi162Scf00611g00067 Petunia axillaris HOM05D000007 ORTHO05D000521 1.2e-17 93.6 128 47.7
CAN.G184.56 Capsicum annuum HOM05D000007 ORTHO05D000521 1.6e-17 93.2 102 50.0
Peaxi162Scf00611g00002 Petunia axillaris HOM05D000007 ORTHO05D000521 2.0e-17 92.8 124 46.0
PGSC0003DMG400037392 Solanum tuberosum HOM05D000007 ORTHO05D000521 1.3e-16 90.1 121 47.9
Peaxi162Scf00583g00001 Petunia axillaris HOM05D000007 ORTHO05D000521 1.7e-16 89.7 99 53.5
Nitab4.5_0000061g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000521 3.0e-16 89.0 98 53.1
TAR624G0469 Trochodendron aralioides HOM05D000007 ORTHO05D000521 2.8e-14 82.4 115 38.3
Peaxi162Scf00376g00043 Petunia axillaris HOM05D000007 ORTHO05D000521 6.2e-14 81.3 75 52.0
TAR381G1454 Trochodendron aralioides HOM05D000007 ORTHO05D000521 9.2e-10 67.4 111 36.0
Cc11_g07980 Coffea canephora HOM05D000007 ORTHO05D000521 3.5e-09 65.5 72 44.4
Sopen05g005930 Solanum pennellii HOM05D021599 ORTHO05D000521 3.9e-08 62.0 47 61.7
Nitab4.5_0002714g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000521 5.0e-08 61.6 57 56.1
RcHm_v2.0_Chr4g0412861 Rosa chinensis HOM05D000007 ORTHO05D000521 5.6e-07 58.2 89 40.4
FAN07G1646 Fragaria x ananassa HOM05D000007 ORTHO05D000521 1.6e-06 56.6 90 37.8
FvH4_4g13100 Fragaria vesca HOM05D000007 ORTHO05D000521 2.1e-06 56.2 90 37.8
FAN12G3766 Fragaria x ananassa HOM05D000234 ORTHO05D001258 2.1e-06 56.2 90 37.8
Rhsim04G0040800 Rhododendron simsii HOM05D000007 ORTHO05D000521 2.8e-06 55.8 97 36.1
Lj8C595T2 Lonicera japonica HOM05D000007 ORTHO05D000521 4.7e-06 55.1 93 40.9


User provided reference genes

Program Settings