Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G943.56 Capsicum annuum HOM05D005601 ORTHO05D007265 1.2e-247 859.4 421 100.0
Sopen07g034790 Solanum pennellii HOM05D005601 ORTHO05D007265 8.5e-230 800.0 423 91.3
Solyc07g066640.3 Solanum lycopersicum HOM05D005601 ORTHO05D007265 9.4e-229 796.6 423 90.8
PGSC0003DMG400022116 Solanum tuberosum HOM05D005601 ORTHO05D007265 3.9e-227 791.2 424 90.3
Nitab4.5_0006109g0020 Nicotiana tabacum HOM05D005601 ORTHO05D007265 6.3e-225 783.9 423 89.4
Nitab4.5_0000029g0250 Nicotiana tabacum HOM05D005601 ORTHO05D007265 6.9e-224 780.4 413 90.6
Peaxi162Scf00452g00334 Petunia axillaris HOM05D005601 ORTHO05D007265 6.1e-220 767.3 423 88.9
Dinv42472 Davidia involucrata HOM05D005601 ORTHO05D007265 1.0e-198 696.8 423 77.5
Migut.M01519 Erythranthe guttata HOM05D005601 ORTHO05D007265 1.0e-195 686.8 427 76.8
CSS0009872 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 3.7e-193 678.3 422 76.8
CSS0045419 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 6.3e-193 677.6 422 76.5
SGA_v2.0_scaffold7G03617 Striga asiatica HOM05D005601 ORTHO05D007265 3.3e-189 665.2 432 74.5
vmacro11692 Vaccinium macrocarpon HOM05D005601 ORTHO05D007265 7.5e-186 654.1 480 66.2
Rhsim06G0242900 Rhododendron simsii HOM05D005601 ORTHO05D007265 1.0e-182 643.7 489 65.4
Lj2A13G19 Lonicera japonica HOM05D005601 ORTHO05D007265 3.0e-182 642.1 418 72.2
MSTRG.7080 Avicennia marina HOM05D005601 ORTHO05D007265 1.4e-179 633.3 426 72.1
SalBow8G4673 Salvia bowleyana HOM05D005601 ORTHO05D007265 4.1e-176 621.7 416 71.9
GSVIVG01020400001 Vitis vinifera HOM05D005601 ORTHO05D007265 3.0e-174 615.5 423 67.8
MELO3C012601.2 Cucumis melo HOM05D005601 ORTHO05D007265 7.3e-173 610.9 423 67.6
CsaV3_7G022950 Cucumis sativus L. HOM05D005601 ORTHO05D007265 2.1e-172 609.4 423 67.1
CiPaw.11G059700 Carya illinoinensis HOM05D005601 ORTHO05D007265 6.2e-172 607.8 425 66.8
ClCG09G022740 Citrullus lanatus HOM05D005601 ORTHO05D007265 5.2e-171 604.7 455 64.0
QL09p016707 Quercus lobata HOM05D005601 ORTHO05D007265 8.9e-171 604.0 441 64.4
Sed0023216 Sechium edule HOM05D005601 ORTHO05D007265 2.6e-170 602.4 423 67.6
QL04p090699 Quercus lobata HOM05D005601 ORTHO05D007265 3.4e-170 602.1 441 64.2
Eucgr.F04464 Eucalyptus grandis HOM05D005601 ORTHO05D007265 7.5e-170 600.9 422 67.1
Manes.14G007400 Manihot esculenta HOM05D005601 ORTHO05D007265 1.3e-169 600.1 425 66.8
Potri.008G084100 Populus trichocarpa HOM05D005601 ORTHO05D007265 1.1e-168 597.0 427 67.2
Potri.010G172300 Populus trichocarpa HOM05D005601 ORTHO05D007265 1.9e-168 596.3 436 65.8
Oeu019720.3 Olea europaea HOM05D005601 ORTHO05D007265 2.4e-168 595.9 430 69.1
TWI38G0323 Tripterygium wilfordii HOM05D005601 ORTHO05D007265 1.1e-165 587.0 431 64.7
Ciclev10006846m.g Citrus clementina HOM05D005601 ORTHO05D007265 1.5e-165 586.6 408 65.9
CANSAT56G2459 Cannabis sativa HOM05D005601 ORTHO05D007265 7.3e-165 584.3 431 63.8
MD05G1234300 Malus domestica HOM05D005601 ORTHO05D007265 7.3e-165 584.3 430 64.0
DCAR_016842 Daucus carota HOM05D005601 ORTHO05D000532 1.6e-164 583.2 437 64.8
Prupe.4G131800 Prunus persica HOM05D005601 ORTHO05D007265 1.5e-162 576.6 440 61.4
Atru.chr1.81 Acer truncatum HOM05D005601 ORTHO05D007265 4.4e-162 575.1 422 64.9
PSO675G6728 Papaver somniferum HOM05D005601 ORTHO05D007265 4.9e-161 571.6 424 64.2
MD10G1210800 Malus domestica HOM05D005601 ORTHO05D007265 8.4e-161 570.9 430 62.8
PGR031G2718 Punica granatum HOM05D005601 ORTHO05D007265 2.4e-160 569.3 464 60.3
Sc09g0007790 Simmondsia chinensis HOM05D005601 ORTHO05D007265 2.1e-159 566.2 425 63.3
Nn7g38204 Nelumbo nucifera HOM05D005601 ORTHO05D007265 4.6e-159 565.1 424 63.0
BcaB02g06608 Brassica carinata HOM05D005601 ORTHO05D007265 1.7e-158 563.1 419 63.2
BcaC05g25587 Brassica carinata HOM05D005601 ORTHO05D007265 3.9e-158 562.0 419 63.0
C05p14450 Brassica napus HOM05D005601 ORTHO05D007265 3.9e-158 562.0 419 63.0
FvH4_3g14650 Fragaria vesca HOM05D005601 ORTHO05D007265 6.6e-158 561.2 433 62.4
BolC5t30171H Brassica oleracea HOM05D005601 ORTHO05D007265 8.6e-158 560.8 419 63.0
Carub.0001s1603 Capsella rubella HOM05D005601 ORTHO05D007265 1.9e-157 559.7 418 63.2
Lj3g0011890 Lotus japonicus HOM05D005601 ORTHO05D007265 9.6e-157 557.4 434 61.1
THA.LOC104812373 Tarenaya hassleriana HOM05D005601 ORTHO05D007265 1.2e-156 557.0 454 60.8
A06p12210 Brassica napus HOM05D005601 ORTHO05D007265 1.6e-156 556.6 419 62.5
BraA06t24389Z Brassica rapa HOM05D005601 ORTHO05D007265 1.6e-156 556.6 419 62.5
Sabra10G0131500 Salix brachista HOM05D005601 ORTHO05D007265 2.1e-156 556.2 435 62.1
RcHm_v2.0_Chr5g0024141 Rosa chinensis HOM05D005601 ORTHO05D007265 2.8e-156 555.8 430 62.3
AL1G28410 Arabidopsis lyrata HOM05D005601 ORTHO05D007265 1.4e-155 553.5 418 62.2
AT1G16290 Arabidopsis thaliana HOM05D005601 ORTHO05D007265 3.1e-155 552.4 418 61.5
CARHR016760 Cardamine hirsuta HOM05D005601 ORTHO05D007265 4.0e-155 552.0 419 62.3
Sp1g14480 Schrenkiella parvula HOM05D005601 ORTHO05D007583 4.0e-155 552.0 408 63.0
TAR627G0482 Trochodendron aralioides HOM05D005601 ORTHO05D007265 4.0e-155 552.0 371 70.1
Aqoxy1G01411 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 5.2e-155 551.6 420 61.4
FAN11G1412 Fragaria x ananassa HOM05D005601 ORTHO05D007265 3.4e-154 548.9 452 59.7
Cc05_g16460 Coffea canephora HOM05D005601 ORTHO05D007265 7.6e-154 547.7 348 75.6
Aa31LG7G820 Aethionema arabicum HOM05D005601 ORTHO05D007265 9.9e-154 547.4 419 62.3
Thecc.07G184900 Theobroma cacao HOM05D005601 ORTHO05D007265 2.9e-153 545.8 426 60.6
Gorai.002G109700 Gossypium raimondii HOM05D005601 ORTHO05D007265 4.9e-153 545.0 423 61.2
Thhalv10007775m.g Eutrema salsugineum HOM05D005601 ORTHO05D007265 3.2e-152 542.3 418 62.0
Lalb_Chr25g0284511 Lupinus albus HOM05D005601 ORTHO05D007265 3.5e-151 538.9 425 60.2
Psat1g014320 Pisum sativum HOM05D005601 ORTHO05D007265 3.0e-150 535.8 429 59.4
Lalb_Chr20g0108481 Lupinus albus HOM05D005601 ORTHO05D007265 1.7e-145 520.0 421 58.2
TPR.G22999 Trifolium pratense HOM05D005601 ORTHO05D007265 3.8e-145 518.8 444 56.1
Aqoxy72s008 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 2.5e-141 506.1 424 57.8
Gorai.013G145200 Gossypium raimondii HOM05D005601 ORTHO05D007265 4.3e-141 505.4 422 57.1
Gohir.D13G129200 Gossypium hirsutum HOM05D005601 ORTHO05D007265 8.1e-140 501.1 422 56.6
Zm00001eb207280 Zea mays HOM05D005601 ORTHO05D007265 4.0e-139 498.8 420 55.2
Gohir.A13G125400 Gossypium hirsutum HOM05D005601 ORTHO05D007265 5.3e-139 498.4 422 56.4
Glyma.08G165100 Glycine max HOM05D005601 ORTHO05D007265 1.6e-135 486.9 426 55.9
arahy.Tifrunner.gnm1.ann1.5WL8RC Arachis hypogaea HOM05D005601 ORTHO05D007265 1.3e-134 483.8 397 58.9
FAN21G2538 Fragaria x ananassa HOM05D005601 ORTHO05D007265 5.1e-134 481.9 424 55.7
FAN16G1778 Fragaria x ananassa HOM05D005601 ORTHO05D007265 6.5e-129 464.9 424 54.5
Ca_03553_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 2.7e-127 459.5 420 54.5
Ca_29556_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 2.7e-127 459.5 420 54.5
SMO196G0059 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 3.3e-125 452.6 400 54.0
MBI02_g08257_MAGBIO Magnolia biondii HOM05D005601 ORTHO05D007265 7.4e-125 451.4 346 60.4
Sabra08G0062400 Salix brachista HOM05D005601 ORTHO05D007265 3.7e-124 449.1 466 53.9
SMO137G0068 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 2.3e-118 429.9 433 47.3
Gohir.D01G084000 Gossypium hirsutum HOM05D005601 ORTHO05D007265 8.8e-118 427.9 347 60.2
Gohir.A01G099600 Gossypium hirsutum HOM05D005601 ORTHO05D007265 2.4e-115 419.9 333 60.1
Mapoly0008s0010 Marchantia polymorpha HOM05D005601 ORTHO05D007265 8.8e-110 401.4 446 45.1
CBR_g32054 Chara braunii HOM05D005601 ORTHO05D007265 1.2e-103 380.9 427 43.1
Pp3c5_22590 Physcomitrium patens HOM05D005601 ORTHO05D007265 4.8e-100 369.0 493 40.4
AagrBONN_evm.TU.Sc2ySwM_117.1218 Anthoceros agrestis HOM05D005601 ORTHO05D007265 7.0e-99 365.2 412 44.2
Oeu034984.1 Olea europaea HOM05D005601 ORTHO05D007265 2.6e-98 363.2 223 79.4
unitig_26.g10063 Utricularia gibba HOM05D005601 ORTHO05D007265 2.7e-95 353.2 249 68.7
Dinv19582 Davidia involucrata HOM05D005601 ORTHO05D007265 4.8e-92 342.4 206 77.7
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 2.1e-79 300.4 385 40.3
Haze_07789 Corylus avellana HOM05D005601 ORTHO05D007265 4.9e-76 289.3 190 67.9
Dinv19583 Davidia involucrata HOM05D005601 ORTHO05D007265 2.0e-74 283.9 187 69.5
Actinidia24664 Actinidia chinensis HOM05D005601 ORTHO05D007265 3.0e-65 253.4 186 64.0
HPP92_016685 Vanilla planifolia HOM05D005601 ORTHO05D007265 5.6e-64 249.2 185 58.4
HPP92_016686 Vanilla planifolia HOM05D005601 ORTHO05D007265 1.7e-52 211.1 158 60.8
ATR0752G040 Amborella trichopoda HOM05D005601 ORTHO05D007265 6.6e-49 199.1 147 57.8
unitig_26.g10062 Utricularia gibba HOM05D000493 ORTHO05D008479 4.4e-45 186.4 103 84.5
arahy.Tifrunner.gnm1.ann1.4IME1R Arachis hypogaea HOM05D005601 ORTHO05D007265 1.9e-43 181.0 152 55.3
CSS0035233 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 2.4e-43 180.6 106 77.4
Sabra07G0054400 Salix brachista HOM05D005601 ORTHO05D007265 2.1e-42 177.6 162 58.6
Sabra07G0054100 Salix brachista HOM05D005601 ORTHO05D007265 7.8e-42 175.6 162 58.0
Sabra07G0054700 Salix brachista HOM05D005601 ORTHO05D007265 7.8e-42 175.6 162 58.6
Sabra07G0055500 Salix brachista HOM05D005601 ORTHO05D007265 1.0e-41 175.3 145 61.4
Aqoxy4G01783 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 2.5e-40 170.6 141 57.4
ATR0752G225 Amborella trichopoda HOM05D005601 ORTHO05D007265 3.6e-39 166.8 125 60.8
Aqoxy5G02624 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 1.8e-38 164.5 117 65.0
Sabra07G0055700 Salix brachista HOM05D005601 ORTHO05D007265 3.2e-35 153.7 127 62.2
SEGI_07478 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 3.9e-33 146.7 120 56.7
Cc05_g16470 Coffea canephora HOM05D005601 ORTHO05D007265 2.5e-32 144.1 82 79.3
Cc01_g09470 Coffea canephora HOM05D005601 ORTHO05D007265 5.6e-32 142.9 88 70.5
SEGI_03880 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 2.1e-26 124.4 101 54.5
Sabra07G0055000 Salix brachista HOM05D005601 ORTHO05D007265 2.7e-26 124.0 86 67.4
Cpa.g.sc32.54 Carica papaya HOM05D005601 ORTHO05D007265 3.5e-26 123.6 72 75.0
SEGI_07505 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 1.0e-25 122.1 108 50.0
Zm00001eb338130 Zea mays HOM05D005601 ORTHO05D007265 5.6e-24 116.3 113 54.0
SHI32865 Sapria himalayana HOM05D005601 ORTHO05D007265 9.6e-24 115.5 83 62.7
SEGI_02544 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 5.8e-21 106.3 90 51.1
SHI32862 Sapria himalayana HOM05D005601 ORTHO05D007265 4.9e-20 103.2 60 70.0
Medtr2g065540 Medicago truncatula HOM05D005601 ORTHO05D007265 3.2e-19 100.5 58 70.7
PRCOL_00003152 Prasinoderma coloniale HOM05D005601 ORTHO05D007265 4.0e-14 83.6 171 30.4
ATR0752G173 Amborella trichopoda HOM05D005601 ORTHO05D007265 9.0e-14 82.4 53 67.9
Zm00001eb249880 Zea mays HOM05D005601 ORTHO05D007265 1.0e-12 79.0 51 64.7
SHI32867 Sapria himalayana HOM05D005601 ORTHO05D007265 1.3e-12 78.6 51 62.7
SHI32866 Sapria himalayana HOM05D005601 ORTHO05D007265 1.2e-10 72.0 88 44.3
Zm00001eb234590 Zea mays HOM05D000076 ORTHO05D007265 4.6e-10 70.1 42 69.0
HPP92_016689 Vanilla planifolia HOM05D005601 ORTHO05D007265 2.3e-09 67.8 37 73.0
Zm00001eb316750 Zea mays HOM05D000076 ORTHO05D001279 2.3e-09 67.8 42 66.7
Cpa.g.sc32.60 Carica papaya HOM05D005601 ORTHO05D000047 5.7e-08 63.2 42 66.7
BraA06t24405Z Brassica rapa HOM05D005601 ORTHO05D007265 1.3e-07 62.0 100 38.0
A06p12420 Brassica napus HOM05D005601 ORTHO05D007265 4.8e-07 60.1 100 37.0
BcaC05g25566 Brassica carinata HOM05D005601 ORTHO05D007265 4.1e-06 57.0 100 36.0


User provided reference genes

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