Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G934.1 Capsicum annuum HOM05D006465 ORTHO05D008207 1.6e-73 279.3 131 100.0
Sopen06g005870 Solanum pennellii HOM05D006465 ORTHO05D008207 1.2e-65 253.1 142 83.8
PGSC0003DMG400030138 Solanum tuberosum HOM05D006465 ORTHO05D008207 2.7e-65 251.9 149 80.5
Nitab4.5_0000181g0060 Nicotiana tabacum HOM05D006465 ORTHO05D008207 6.2e-62 240.7 149 77.2
Peaxi162Scf00270g01115 Petunia axillaris HOM05D006465 ORTHO05D008207 1.4e-58 229.6 152 73.0
Cc07_g18520 Coffea canephora HOM05D006465 ORTHO05D008207 4.4e-52 208.0 114 77.2
Lj4A839G53 Lonicera japonica HOM05D006465 ORTHO05D008207 5.6e-47 191.0 135 68.9
Dinv07122 Davidia involucrata HOM05D006465 ORTHO05D008207 1.6e-46 189.5 112 72.3
MSTRG.3605 Avicennia marina HOM05D006465 ORTHO05D008207 6.2e-46 187.6 132 64.4
Hund23271 Selenicereus undatus HOM05D006465 ORTHO05D008207 3.1e-45 185.3 126 67.5
TAR381G0246 Trochodendron aralioides HOM05D006465 ORTHO05D008207 4.0e-45 184.9 117 70.9
Actinidia06618 Actinidia chinensis HOM05D006465 ORTHO05D008207 1.2e-44 183.3 115 69.6
Migut.L00965 Erythranthe guttata HOM05D006465 ORTHO05D008207 1.2e-44 183.3 130 65.4
vmacro12798 Vaccinium macrocarpon HOM05D006465 ORTHO05D008207 1.2e-44 183.3 112 75.9
Migut.L00880 Erythranthe guttata HOM05D006465 ORTHO05D008207 2.0e-44 182.6 130 63.8
MD07G1057500 Malus domestica HOM05D006465 ORTHO05D008207 2.0e-44 182.6 140 60.0
SGA_v2.0_scaffold19G08773 Striga asiatica HOM05D006465 ORTHO05D008207 2.6e-44 182.2 116 69.0
Lsat_1_v5_gn_9_25981 Lactuca sativa HOM05D006465 ORTHO05D008207 4.4e-44 181.4 116 69.0
A10p27930 Brassica napus HOM05D006465 ORTHO05D008207 7.6e-44 180.6 126 67.5
Potri.005G063100 Populus trichocarpa HOM05D006465 ORTHO05D008207 7.6e-44 180.6 143 60.1
BcaB08g37219 Brassica carinata HOM05D006465 ORTHO05D008207 9.9e-44 180.3 126 66.7
Dinv24364 Davidia involucrata HOM05D006465 ORTHO05D008207 9.9e-44 180.3 108 72.2
Oeu004242.1 Olea europaea HOM05D006465 ORTHO05D008207 9.9e-44 180.3 112 70.5
Hma1.2p1_0476F.1_g160840 Hydrangea macrophylla HOM05D006465 ORTHO05D008207 1.3e-43 179.9 128 65.6
Sc07g0001830 Simmondsia chinensis HOM05D006465 ORTHO05D008207 1.3e-43 179.9 112 71.4
Ah.02g121490 Amaranthus hybridus HOM05D006465 ORTHO05D008207 2.2e-43 179.1 115 67.8
CSS0043698 Camellia sinensis var. sinensis HOM05D006465 ORTHO05D008207 2.2e-43 179.1 112 68.8
BraA10t44842Z Brassica rapa HOM05D006465 ORTHO05D008207 3.8e-43 178.3 109 72.5
PSO170G5905 Papaver somniferum HOM05D006465 ORTHO05D008207 3.8e-43 178.3 110 71.8
CsaV3_2G018330 Cucumis sativus L. HOM05D006465 ORTHO05D008207 4.9e-43 177.9 124 68.5
Thhalv10014951m.g Eutrema salsugineum HOM05D006465 ORTHO05D008207 6.4e-43 177.6 109 71.6
AUR62003565 Chenopodium quinoa HOM05D006465 ORTHO05D008207 8.4e-43 177.2 115 67.8
PSO017G4081 Papaver somniferum HOM05D006465 ORTHO05D008207 8.4e-43 177.2 110 70.9
GSVIVG01026483001 Vitis vinifera HOM05D006465 ORTHO05D008207 8.4e-43 177.2 110 70.9
HanXRQChr15g0491331 Helianthus annuus HOM05D006465 ORTHO05D008207 1.4e-42 176.4 113 69.0
Manes.03G123050 Manihot esculenta HOM05D006465 ORTHO05D008207 1.4e-42 176.4 131 62.6
Prupe.4G271100 Prunus persica HOM05D006465 ORTHO05D008207 1.4e-42 176.4 142 56.3
A03p04100 Brassica napus HOM05D006465 ORTHO05D008207 1.9e-42 176.0 109 71.6
BolC3t12987H Brassica oleracea HOM05D006465 ORTHO05D008207 1.9e-42 176.0 109 71.6
BraA03t09753Z Brassica rapa HOM05D006465 ORTHO05D008207 1.9e-42 176.0 109 71.6
CARHR204090 Cardamine hirsuta HOM05D006465 ORTHO05D008207 1.9e-42 176.0 109 71.6
ECA247G0944 Erigeron canadensis HOM05D006465 ORTHO05D008207 1.9e-42 176.0 125 65.6
ClCG02G000500 Citrullus lanatus HOM05D006465 ORTHO05D008207 2.4e-42 175.6 119 68.9
DCAR_014336 Daucus carota HOM05D006465 ORTHO05D008207 2.4e-42 175.6 116 68.1
PGR119G2011 Punica granatum HOM05D006465 ORTHO05D008207 3.2e-42 175.3 110 69.1
THA.LOC104800074 Tarenaya hassleriana HOM05D006465 ORTHO05D008207 3.2e-42 175.3 136 61.8
Thecc.01G132600 Theobroma cacao HOM05D006465 ORTHO05D008207 3.2e-42 175.3 110 68.2
TWI79G1280 Tripterygium wilfordii HOM05D006465 ORTHO05D008207 3.2e-42 175.3 110 67.3
unitig_88.g27767 Utricularia gibba HOM05D006465 ORTHO05D008207 3.2e-42 175.3 124 64.5
C03p04560 Brassica napus HOM05D006465 ORTHO05D008207 4.2e-42 174.9 109 69.7
AUR62017880 Chenopodium quinoa HOM05D006465 ORTHO05D008207 4.2e-42 174.9 115 67.8
Duzib187G1992 Durio zibethinus HOM05D006465 ORTHO05D008207 4.2e-42 174.9 110 69.1
FvH4_2g08820 Fragaria vesca HOM05D006465 ORTHO05D008207 4.2e-42 174.9 110 69.1
FAN10G0435 Fragaria x ananassa HOM05D006465 ORTHO05D008207 4.2e-42 174.9 110 69.1
FAN15G0521 Fragaria x ananassa HOM05D006465 ORTHO05D008207 4.2e-42 174.9 110 69.1
Medtr3g096320 Medicago truncatula HOM05D006465 ORTHO05D008207 5.4e-42 174.5 110 70.0
RcHm_v2.0_Chr6g0264391 Rosa chinensis HOM05D006465 ORTHO05D008207 5.4e-42 174.5 110 68.2
Nn5g28548 Nelumbo nucifera HOM05D006465 ORTHO05D008207 7.1e-42 174.1 125 65.6
Sabra05G0052300 Salix brachista HOM05D006465 ORTHO05D008207 7.1e-42 174.1 112 67.0
Ciclev10002814m.g Citrus clementina HOM05D006465 ORTHO05D008207 9.3e-42 173.7 139 58.3
SalBow7G2903 Salvia bowleyana HOM05D006465 ORTHO05D008207 9.3e-42 173.7 131 61.8
AL6G19700 Arabidopsis lyrata HOM05D006465 ORTHO05D008207 1.2e-41 173.3 109 70.6
Carub.0006s0786 Capsella rubella HOM05D006465 ORTHO05D008207 1.2e-41 173.3 109 70.6
Glyma.06G153700 Glycine max HOM05D006465 ORTHO05D008207 1.2e-41 173.3 110 70.9
AT5G09310 Arabidopsis thaliana HOM05D006465 ORTHO05D008207 1.6e-41 172.9 109 70.6
TWI75G0808 Tripterygium wilfordii HOM05D006465 ORTHO05D008207 1.6e-41 172.9 109 67.9
Sp6g34010 Schrenkiella parvula HOM05D006465 ORTHO05D008207 2.1e-41 172.6 109 69.7
Sed0005537 Sechium edule HOM05D006465 ORTHO05D008207 2.1e-41 172.6 116 67.2
EL10Ac6g15303 Beta vulgaris HOM05D006465 ORTHO05D008207 2.7e-41 172.2 125 62.4
TPR.G28231 Trifolium pratense HOM05D006465 ORTHO05D008207 2.7e-41 172.2 134 61.2
Ca_16948_v3 Cicer arietinum L. HOM05D002517 ORTHO05D003040 3.5e-41 171.8 136 61.0
Ca_16968_v3 Cicer arietinum L. HOM05D006465 ORTHO05D008207 3.5e-41 171.8 136 61.0
TAR625G1289 Trochodendron aralioides HOM05D006465 ORTHO05D008207 7.8e-41 170.6 116 69.0
CANSAT01G2296 Cannabis sativa HOM05D006465 ORTHO05D008207 1.0e-40 170.2 110 69.1
CiPaw.04G082200 Carya illinoinensis HOM05D006465 ORTHO05D008207 1.3e-40 169.9 110 66.4
CDE04G1235 Ceratophyllum demersum HOM05D006465 ORTHO05D008207 1.3e-40 169.9 110 65.5
Gohir.A05G384500 Gossypium hirsutum HOM05D005188 ORTHO05D006153 1.7e-40 169.5 108 70.4
Oeu050125.1 Olea europaea HOM05D006465 ORTHO05D008207 3.0e-40 168.7 131 62.6
Glyma.04G212600 Glycine max HOM05D006465 ORTHO05D008207 3.9e-40 168.3 110 69.1
Gohir.D04G031000 Gossypium hirsutum HOM05D006465 ORTHO05D008207 3.9e-40 168.3 108 69.4
Gorai.012G035200 Gossypium raimondii HOM05D005188 ORTHO05D006153 3.9e-40 168.3 108 69.4
Psat5g062320 Pisum sativum HOM05D006465 ORTHO05D008207 3.9e-40 168.3 136 58.1
Aa31LG3G17710 Aethionema arabicum HOM05D003132 ORTHO05D003736 5.1e-40 167.9 106 68.9
Aqoxy5G02229 Aquilegia oxysepala HOM05D006465 ORTHO05D000054 5.1e-40 167.9 118 65.3
Lj1g0025116 Lotus japonicus HOM05D006465 ORTHO05D008207 5.1e-40 167.9 131 59.5
Haze_25235 Corylus avellana HOM05D006465 ORTHO05D008207 1.1e-39 166.8 108 66.7
Atru.chr4.901 Acer truncatum HOM05D006465 ORTHO05D008207 2.5e-39 165.6 133 60.9
Phvul.009G150900 Phaseolus vulgaris HOM05D006465 ORTHO05D008207 2.5e-39 165.6 110 67.3
HPP92_019397 Vanilla planifolia HOM05D006465 ORTHO05D008207 7.3e-39 164.1 115 64.3
arahy.Tifrunner.gnm1.ann1.X6LXMM Arachis hypogaea HOM05D006465 ORTHO05D008207 1.6e-38 162.9 121 62.0
Lalb_Chr08g0238351 Lupinus albus HOM05D006465 ORTHO05D008207 2.8e-38 162.2 128 60.2
Hund04414 Selenicereus undatus HOM05D006465 ORTHO05D008207 5.3e-37 157.9 176 47.7
VMungo1309G0274 Vigna mungo HOM05D006465 ORTHO05D008207 5.3e-37 157.9 120 62.5
arahy.Tifrunner.gnm1.ann1.Q2CXKS Arachis hypogaea HOM05D006465 ORTHO05D008207 1.2e-36 156.8 137 54.7
MELO3C023238.2 Cucumis melo HOM05D006465 ORTHO05D008207 3.4e-36 155.2 142 56.3
FAN24G0187 Fragaria x ananassa HOM05D006465 ORTHO05D008207 4.9e-35 151.4 98 68.4
ATR0138G005 Amborella trichopoda HOM05D006465 ORTHO05D008207 8.4e-35 150.6 114 61.4
Solyc06g016760.3 Solanum lycopersicum HOM05D006465 ORTHO05D008207 8.4e-35 150.6 88 79.5
Os01g0960000 Oryza sativa ssp. japonica HOM05D006465 ORTHO05D008207 1.4e-34 149.8 115 59.1
QL10p043584 Quercus lobata HOM05D006465 ORTHO05D008207 2.7e-33 145.6 150 48.7
Zm00001eb362550 Zea mays HOM05D006465 ORTHO05D008207 4.6e-33 144.8 116 56.9
FvH4_3g04510 Fragaria vesca HOM05D006465 ORTHO05D008207 2.3e-32 142.5 99 63.6
FAN11G3155 Fragaria x ananassa HOM05D006465 ORTHO05D008207 2.3e-32 142.5 99 64.6
AagrBONN_evm.TU.Sc2ySwM_117.2181 Anthoceros agrestis HOM05D006465 ORTHO05D008207 2.1e-30 136.0 127 49.6
Pp3c15_3010 Physcomitrium patens HOM05D006465 ORTHO05D008207 3.4e-28 128.6 105 55.2
Mapoly0113s0017 Marchantia polymorpha HOM05D006465 ORTHO05D008207 5.8e-28 127.9 109 50.5
SMO367G0154 Selaginella moellendorffii HOM05D006465 ORTHO05D008207 3.2e-26 122.1 109 53.2
SEGI_17702 Sequoiadendron giganteum HOM05D006465 ORTHO05D008207 5.1e-24 114.8 98 55.1
MD02G1262600 Malus domestica HOM05D006465 ORTHO05D008207 1.0e-19 100.5 81 58.0
vmacro20733 Vaccinium macrocarpon HOM05D006465 ORTHO05D008207 1.9e-18 96.3 55 80.0
Rhsim10G0133300 Rhododendron simsii HOM05D006465 ORTHO05D008207 3.2e-18 95.5 53 81.1
CBR_g29852 Chara braunii HOM05D006465 ORTHO05D008207 9.3e-18 94.0 102 48.0
Lj4A838T21 Lonicera japonica HOM05D006465 ORTHO05D008207 2.1e-17 92.8 53 79.2
Potri.007G106200 Populus trichocarpa HOM05D006465 ORTHO05D008207 1.0e-16 90.5 91 53.8
CDE12G0205 Ceratophyllum demersum HOM05D006465 ORTHO05D008207 8.7e-16 87.4 51 64.7
Cc00_g19040 Coffea canephora HOM05D006465 ORTHO05D008207 1.1e-15 87.0 51 72.5
Cc00_g31500 Coffea canephora HOM05D006465 ORTHO05D008207 2.5e-15 85.9 50 72.0
Lalb_Chr11g0068481 Lupinus albus HOM05D006465 ORTHO05D008207 2.8e-14 82.4 51 68.6
Eucgr.I00202 Eucalyptus grandis HOM05D006465 ORTHO05D008207 2.4e-13 79.3 48 68.8
BolC9t59563H Brassica oleracea HOM05D006465 ORTHO05D008207 4.5e-12 75.1 45 71.1
Lalb_Chr11g0068471 Lupinus albus HOM05D006465 ORTHO05D008207 4.2e-10 68.6 49 57.1
Nitab4.5_0003581g0060 Nicotiana tabacum HOM05D006465 ORTHO05D008207 7.9e-09 64.3 57 59.6
PRCOL_00001485 Prasinoderma coloniale HOM05D006465 ORTHO05D008207 3.0e-08 62.4 96 42.7


User provided reference genes

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