Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G933.18 Capsicum annuum HOM05D005749 ORTHO05D007208 1.5e-195 686.0 358 100.0
Solyc10g085980.2 Solanum lycopersicum HOM05D005749 ORTHO05D007208 5.8e-171 604.4 359 90.0
Sopen10g035350 Solanum pennellii HOM05D005749 ORTHO05D007208 1.2e-168 596.7 359 89.1
PGSC0003DMG400017609 Solanum tuberosum HOM05D005749 ORTHO05D007208 2.9e-162 575.5 384 82.8
Nitab4.5_0002073g0030 Nicotiana tabacum HOM05D005749 ORTHO05D007208 2.4e-161 572.4 387 80.4
Nitab4.5_0000754g0010 Nicotiana tabacum HOM05D005749 ORTHO05D007208 4.2e-137 491.9 428 66.4
HanXRQChr11g0349581 Helianthus annuus HOM05D005749 ORTHO05D007208 3.2e-129 465.7 364 72.5
Eucgr.K03191 Eucalyptus grandis HOM05D005749 ORTHO05D007208 3.6e-128 462.2 338 73.1
Cc06_g03360 Coffea canephora HOM05D005749 ORTHO05D007208 6.1e-128 461.5 295 81.0
Dinv35687 Davidia involucrata HOM05D005749 ORTHO05D007208 2.3e-127 459.5 279 85.7
QL07p045817 Quercus lobata HOM05D005749 ORTHO05D007208 6.7e-127 458.0 385 66.5
Actinidia11228 Actinidia chinensis HOM05D005749 ORTHO05D007208 1.7e-125 453.4 387 68.2
Prupe.6G244800 Prunus persica HOM05D005749 ORTHO05D007208 1.7e-125 453.4 379 66.2
Sc07g0006200 Simmondsia chinensis HOM05D005749 ORTHO05D007208 1.1e-124 450.7 292 80.5
GSVIVG01025567001 Vitis vinifera HOM05D005749 ORTHO05D007208 5.3e-124 448.4 299 79.3
RhsimUnG0120200 Rhododendron simsii HOM05D005749 ORTHO05D007208 9.1e-124 447.6 301 79.7
RcHm_v2.0_Chr3g0468141 Rosa chinensis HOM05D005749 ORTHO05D007208 9.1e-124 447.6 385 66.2
SGA_v2.0_scaffold75G24898 Striga asiatica HOM05D005749 ORTHO05D007208 1.2e-123 447.2 273 84.2
Ciclev10011952m.g Citrus clementina HOM05D005749 ORTHO05D007208 1.5e-123 446.8 387 65.4
Migut.J00398 Erythranthe guttata HOM05D005749 ORTHO05D007208 2.6e-123 446.0 276 83.3
AUR62016425 Chenopodium quinoa HOM05D005749 ORTHO05D007208 1.3e-122 443.7 291 79.0
Lj2A105T62 Lonicera japonica HOM05D005749 ORTHO05D007208 2.2e-122 443.0 294 81.0
Gorai.002G252100 Gossypium raimondii HOM05D005749 ORTHO05D007208 6.5e-122 441.4 368 66.8
COL.COLO4_10301 Corchorus olitorius HOM05D005749 ORTHO05D007208 8.5e-122 441.0 374 66.3
Gohir.D01G207000 Gossypium hirsutum HOM05D005749 ORTHO05D007208 1.1e-121 440.7 368 66.8
Aqoxy2G01923 Aquilegia oxysepala HOM05D005749 ORTHO05D007208 1.4e-121 440.3 331 71.3
BraA02t05118Z Brassica rapa HOM05D005749 ORTHO05D007208 2.5e-121 439.5 267 84.6
PGR004G0882 Punica granatum HOM05D005749 ORTHO05D007208 3.2e-121 439.1 288 79.5
A02p01390 Brassica napus HOM05D005749 ORTHO05D007208 5.5e-121 438.3 267 84.6
Sp6g31500 Schrenkiella parvula HOM05D005749 ORTHO05D007208 5.5e-121 438.3 384 64.3
ECA248G2107 Erigeron canadensis HOM05D005749 ORTHO05D007208 7.2e-121 438.0 280 82.1
Gohir.A01G218100 Gossypium hirsutum HOM05D005749 ORTHO05D007208 7.2e-121 438.0 368 66.3
MD04G1111300 Malus domestica HOM05D005749 ORTHO05D007208 7.2e-121 438.0 384 64.3
CSS0045869 Camellia sinensis var. sinensis HOM05D005749 ORTHO05D007208 9.4e-121 437.6 386 64.5
THA.LOC104816307 Tarenaya hassleriana HOM05D005749 ORTHO05D007208 1.2e-120 437.2 288 79.9
C02p05630 Brassica napus HOM05D005749 ORTHO05D007208 1.6e-120 436.8 382 66.2
A10p25670 Brassica napus HOM05D005749 ORTHO05D007208 4.7e-120 435.3 277 80.9
BraA10t44632Z Brassica rapa HOM05D005749 ORTHO05D007208 4.7e-120 435.3 277 80.9
Carub.0006s1064 Capsella rubella HOM05D005749 ORTHO05D007208 1.0e-119 434.1 279 81.0
Thhalv10013777m.g Eutrema salsugineum HOM05D005749 ORTHO05D007208 1.0e-119 434.1 274 81.8
CARHR200990 Cardamine hirsuta HOM05D005749 ORTHO05D007208 1.4e-119 433.7 290 79.0
SalBow3G2006 Salvia bowleyana HOM05D005749 ORTHO05D007208 2.3e-119 433.0 280 79.6
BolC9t59305H Brassica oleracea HOM05D005749 ORTHO05D007208 3.9e-119 432.2 366 65.8
FAN02G1517 Fragaria x ananassa HOM05D005749 ORTHO05D007208 3.9e-119 432.2 377 66.3
unitig_27.g25368 Utricularia gibba HOM05D005749 ORTHO05D007208 3.9e-119 432.2 282 78.4
FAN05G4959 Fragaria x ananassa HOM05D005749 ORTHO05D007208 5.2e-119 431.8 377 66.3
Thecc.05G051000 Theobroma cacao HOM05D005749 ORTHO05D007208 5.2e-119 431.8 369 66.4
C09p64740 Brassica napus HOM05D005749 ORTHO05D007208 6.7e-119 431.4 366 66.1
Duzib093G1962 Durio zibethinus HOM05D005749 ORTHO05D007208 6.7e-119 431.4 367 65.4
BcaNung06325 Brassica carinata HOM05D005749 ORTHO05D007208 1.1e-118 430.6 372 65.6
TAR623G1622 Trochodendron aralioides HOM05D005749 ORTHO05D007208 1.1e-118 430.6 302 74.5
Lj5g0012474 Lotus japonicus HOM05D005749 ORTHO05D007208 1.5e-118 430.3 370 65.4
CiPaw.10G138600 Carya illinoinensis HOM05D005749 ORTHO05D007208 2.0e-118 429.9 278 78.8
Medtr1g067200 Medicago truncatula HOM05D005749 ORTHO05D007208 2.6e-118 429.5 368 65.5
Lalb_Chr20g0112991 Lupinus albus HOM05D005749 ORTHO05D007208 3.3e-118 429.1 271 81.5
Potri.006G133900 Populus trichocarpa HOM05D005749 ORTHO05D007208 7.4e-118 427.9 283 78.8
FvH4_6g14940 Fragaria vesca HOM05D005749 ORTHO05D007208 1.7e-117 426.8 377 65.3
FAN14G3553 Fragaria x ananassa HOM05D005749 ORTHO05D007208 1.7e-117 426.8 377 65.3
arahy.Tifrunner.gnm1.ann1.F15EJL Arachis hypogaea HOM05D005749 ORTHO05D007208 2.2e-117 426.4 293 75.8
Cfa017475 Carpinus fangiana HOM05D005749 ORTHO05D007208 2.2e-117 426.4 354 65.8
FAN09G3437 Fragaria x ananassa HOM05D005749 ORTHO05D007208 3.7e-117 425.6 362 67.4
AL6G22910 Arabidopsis lyrata HOM05D005749 ORTHO05D007208 4.8e-117 425.2 274 80.7
AT5G12130 Arabidopsis thaliana HOM05D005749 ORTHO05D007208 4.8e-117 425.2 382 63.4
Haze_20679 Corylus avellana HOM05D005749 ORTHO05D007208 6.3e-117 424.9 368 65.2
Glyma.13G135400 Glycine max HOM05D005749 ORTHO05D007208 8.2e-117 424.5 365 66.3
TPR.G35663 Trifolium pratense HOM05D005749 ORTHO05D007208 8.2e-117 424.5 374 64.2
Glyma.10G047600 Glycine max HOM05D005749 ORTHO05D007208 1.1e-116 424.1 376 63.6
Aa31LG3G15070 Aethionema arabicum HOM05D005749 ORTHO05D007208 1.8e-116 423.3 269 81.4
VMungo0720G0421 Vigna mungo HOM05D005749 ORTHO05D007208 2.4e-116 422.9 368 64.1
vmacro20079 Vaccinium macrocarpon HOM05D005749 ORTHO05D007208 3.1e-116 422.5 339 69.6
Lalb_Chr02g0153481 Lupinus albus HOM05D005749 ORTHO05D007208 1.2e-115 420.6 297 74.4
Lsat_1_v5_gn_1_53521 Lactuca sativa HOM05D005749 ORTHO05D007208 3.5e-115 419.1 390 64.1
Ca_02301_v3 Cicer arietinum L. HOM05D005749 ORTHO05D007208 1.3e-114 417.2 268 80.6
PSO339G5588 Papaver somniferum HOM05D005749 ORTHO05D007208 1.7e-114 416.8 268 80.2
PSO384G0170 Papaver somniferum HOM05D005749 ORTHO05D007208 1.7e-114 416.8 268 79.9
CsaV3_4G024440 Cucumis sativus L. HOM05D005749 ORTHO05D007208 2.2e-114 416.4 367 64.9
Hma1.2p1_0350F.1_g132660 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 2.2e-114 416.4 259 82.2
BolC2t06507H Brassica oleracea HOM05D005749 ORTHO05D007208 5.0e-114 415.2 247 86.2
ClCG04G008720 Citrullus lanatus HOM05D005749 ORTHO05D007208 2.5e-113 412.9 370 64.3
DCAR_014958 Daucus carota HOM05D005749 ORTHO05D007208 8.8e-111 404.4 384 60.7
MELO3C003076.2 Cucumis melo HOM05D005749 ORTHO05D007208 1.2e-110 404.1 367 63.8
HPP92_000647 Vanilla planifolia HOM05D005749 ORTHO05D007208 9.7e-110 401.0 268 76.5
HPP92_000699 Vanilla planifolia HOM05D005749 ORTHO05D007208 2.8e-109 399.4 268 76.1
Zm00001eb265640 Zea mays HOM05D005749 ORTHO05D007208 6.3e-109 398.3 297 69.0
Os05g0121200 Oryza sativa ssp. japonica HOM05D005749 ORTHO05D007208 2.0e-107 393.3 293 68.9
Oeu029112.2 Olea europaea HOM05D000267 ORTHO05D000298 8.5e-106 387.9 236 86.0
Zm00001eb355290 Zea mays HOM05D005749 ORTHO05D007208 7.2e-105 384.8 294 68.0
Sed0002515 Sechium edule HOM05D005749 ORTHO05D007208 9.4e-105 384.4 345 64.3
CANSAT80G2775 Cannabis sativa HOM05D005749 ORTHO05D007208 1.2e-104 384.0 372 59.4
MBI13_g05975_MAGBIO Magnolia biondii HOM05D005749 ORTHO05D007208 1.2e-104 384.0 278 75.2
Manes.08G001100 Manihot esculenta HOM05D005749 ORTHO05D007208 3.4e-102 375.9 326 65.3
Hund12066 Selenicereus undatus HOM05D005749 ORTHO05D007208 9.1e-100 367.9 290 70.7
arahy.Tifrunner.gnm1.ann1.SNR3S1 Arachis hypogaea HOM05D005749 ORTHO05D007208 6.5e-98 361.7 469 48.2
arahy.Tifrunner.gnm1.ann1.R14JEG Arachis hypogaea HOM05D005749 ORTHO05D007208 1.5e-97 360.5 247 75.7
EL10Ac7g17315 Beta vulgaris HOM05D005749 ORTHO05D007208 3.3e-97 359.4 306 66.7
arahy.Tifrunner.gnm1.ann1.V0P37H Arachis hypogaea HOM05D005749 ORTHO05D007208 4.2e-97 359.0 474 47.3
Mapoly0068s0066 Marchantia polymorpha HOM05D005749 ORTHO05D007208 4.2e-97 359.0 269 69.5
Pp3c12_18750 Physcomitrium patens HOM05D005749 ORTHO05D007208 7.5e-94 348.2 268 68.7
AagrBONN_evm.TU.Sc2ySwM_362.1198 Anthoceros agrestis HOM05D005749 ORTHO05D007208 8.6e-90 334.7 288 60.8
FAN09G4246 Fragaria x ananassa HOM05D005749 ORTHO05D007208 8.6e-90 334.7 206 81.6
Hma1.2p1_0350F.1_g132650 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 1.0e-87 327.8 211 79.1
MD12G1129500 Malus domestica HOM05D005749 ORTHO05D007208 1.4e-87 327.4 342 56.7
Psat6g125120 Pisum sativum HOM05D005749 ORTHO05D007208 6.8e-87 325.1 314 61.1
Ah.08g212020 Amaranthus hybridus HOM05D005749 ORTHO05D007208 4.9e-85 318.9 347 57.6
Peaxi162Scf00146g01323 Petunia axillaris HOM05D005749 ORTHO05D007208 4.9e-85 318.9 177 92.7
Atru.chr8.2516 Acer truncatum HOM05D005749 ORTHO05D007208 6.8e-79 298.5 299 58.5
AUR62011608 Chenopodium quinoa HOM05D005749 ORTHO05D007208 2.0e-78 297.0 299 59.2
MCO03G081 Micromonas commoda HOM05D005749 ORTHO05D007208 1.3e-77 294.3 275 56.0
MCO03G201 Micromonas commoda HOM05D005749 ORTHO05D007208 5.4e-76 288.9 263 57.0
Sabra06G0105200 Salix brachista HOM05D005749 ORTHO05D007208 3.6e-72 276.2 313 55.3
Cre17.g712400 Chlamydomonas reinhardtii HOM05D005749 ORTHO05D007208 2.0e-70 270.4 260 57.3
SMO201G0179 Selaginella moellendorffii HOM05D005749 ORTHO05D007208 1.3e-69 267.7 187 71.7
PRCOL_00003295 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 2.2e-69 266.9 259 55.6
ATR0594G051 Amborella trichopoda HOM05D005749 ORTHO05D007208 6.6e-66 255.4 157 84.1
PRCOL_00006447 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 4.0e-63 246.1 331 45.3
Phvul.007G161800 Phaseolus vulgaris HOM05D005749 ORTHO05D007208 3.4e-62 243.0 266 54.5
Cpa.g.sc114.34 Carica papaya HOM05D005749 ORTHO05D007208 1.1e-55 221.5 142 79.6
Actinidia19727 Actinidia chinensis HOM05D005749 ORTHO05D007208 1.8e-55 220.7 129 86.0
RcHm_v2.0_Chr2g0168111 Rosa chinensis HOM05D005749 ORTHO05D007208 6.4e-53 212.2 130 83.8
SEGI_07760 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 5.1e-50 202.6 136 76.5
Cpa.g.sc114.35 Carica papaya HOM05D005749 ORTHO05D007208 6.2e-48 195.7 123 84.6
Hma1.2p1_0111F.1_g053580 Hydrangea macrophylla HOM05D005749 ORTHO05D007208 1.9e-41 174.1 108 77.8
PRCOL_00000418 Prasinoderma coloniale HOM05D005749 ORTHO05D007208 6.9e-39 165.6 253 38.3
CDE09G0524 Ceratophyllum demersum HOM05D005749 ORTHO05D007208 8.4e-29 132.1 179 43.0
SEGI_12651 Sequoiadendron giganteum HOM05D005749 ORTHO05D007208 2.3e-26 124.0 82 81.7
CBR_g5606 Chara braunii HOM05D000019 ORTHO05D000002 1.1e-25 121.7 187 39.0
Lsat_1_v5_gn_1_79620 Lactuca sativa HOM05D005749 ORTHO05D007208 6.3e-24 115.9 90 66.7
Dinv03750 Davidia involucrata HOM05D005749 ORTHO05D007208 2.5e-12 77.4 41 95.1
Actinidia19728 Actinidia chinensis HOM05D005749 ORTHO05D007208 2.1e-11 74.3 149 40.3
Peaxi162Scf00146g01322 Petunia axillaris HOM05D005749 ORTHO05D007208 7.9e-11 72.4 66 66.7
MCO11G480 Micromonas commoda HOM05D005749 ORTHO05D007208 2.6e-09 67.4 244 23.8
Dinv06973 Davidia involucrata HOM05D005749 ORTHO05D007208 7.4e-09 65.9 36 88.9
CBR_g41620 Chara braunii HOM05D005749 ORTHO05D007208 4.1e-07 60.1 51 58.8


User provided reference genes

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