Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G929.35 Capsicum annuum HOM05D014102 ORTHO05D016168 3.4e-65 251.5 128 100.0
CAN.G2537.1 Capsicum annuum HOM05D000004 ORTHO05D000002 5.7e-52 207.6 119 87.4
Sopen08g016280 Solanum pennellii HOM05D000004 ORTHO05D000002 1.0e-29 133.7 133 55.6
Sopen02g028910 Solanum pennellii HOM05D000004 ORTHO05D000002 3.7e-19 98.6 133 45.9
Sopen02g018880 Solanum pennellii HOM05D000004 ORTHO05D000048 5.2e-13 78.2 50 60.0
Sopen03g015220 Solanum pennellii HOM05D000004 ORTHO05D000002 5.2e-13 78.2 50 60.0
PGSC0003DMG400042551 Solanum tuberosum HOM05D023338 ORTHO05D028486 3.4e-12 75.5 57 54.4
Sopen11g025280 Solanum pennellii HOM05D000004 ORTHO05D000002 4.4e-12 75.1 50 58.0
CAN.G386.37 Capsicum annuum HOM05D000004 ORTHO05D000002 9.8e-12 73.9 49 55.1
CAN.G1384.2 Capsicum annuum HOM05D000015 ORTHO05D000002 2.8e-11 72.4 97 47.4
Atru.chr3.1983 Acer truncatum HOM05D000004 ORTHO05D000002 4.1e-10 68.6 127 34.6
CAN.G921.5 Capsicum annuum HOM05D019044 ORTHO05D000002 1.6e-09 66.6 107 34.6
BcaB07g33616 Brassica carinata HOM05D000004 ORTHO05D000002 2.0e-09 66.2 115 32.2
BcaC08g44498 Brassica carinata HOM05D000004 ORTHO05D027131 2.0e-09 66.2 57 50.9
CAN.G134.70 Capsicum annuum HOM05D014102 ORTHO05D016168 2.0e-09 66.2 102 42.2
Sopen04g023950 Solanum pennellii HOM05D000004 ORTHO05D000002 3.5e-09 65.5 139 30.9
Nn2g14750 Nelumbo nucifera HOM05D000004 ORTHO05D000002 5.9e-09 64.7 52 50.0
TPR.G22228 Trifolium pratense HOM05D000004 ORTHO05D000002 5.9e-09 64.7 105 35.2
TPR.G28616 Trifolium pratense HOM05D000004 ORTHO05D000002 5.9e-09 64.7 58 48.3
EL10Ac7g17357 Beta vulgaris HOM05D000004 ORTHO05D000002 1.0e-08 63.9 125 32.0
Nn1g03780 Nelumbo nucifera HOM05D000004 ORTHO05D000002 1.0e-08 63.9 109 32.1
EL10Ac9g22701 Beta vulgaris HOM05D000004 ORTHO05D000002 1.3e-08 63.5 51 51.0
TPR.G18991 Trifolium pratense HOM05D000004 ORTHO05D000002 1.3e-08 63.5 123 33.3
Nn1g04221 Nelumbo nucifera HOM05D000004 ORTHO05D000002 1.7e-08 63.2 51 51.0
Sopen07g005380 Solanum pennellii HOM05D000004 ORTHO05D000048 1.7e-08 63.2 141 29.8
AUR62027767 Chenopodium quinoa HOM05D000004 ORTHO05D000002 2.2e-08 62.8 57 42.1
Nn7g37314 Nelumbo nucifera HOM05D000004 ORTHO05D000002 2.2e-08 62.8 52 50.0
Sp7g21440 Schrenkiella parvula HOM05D000004 ORTHO05D000002 3.8e-08 62.0 123 32.5
BcaB05g22502 Brassica carinata HOM05D011596 ORTHO05D000002 5.0e-08 61.6 54 46.3
Sopen05g011810 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-08 61.6 43 60.5
CSS0005910 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.5e-08 60.8 55 47.3
ECA246G2187 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.1e-07 60.5 53 47.2
ECA233G4222 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.5e-07 60.1 50 44.0
ECA238G3964 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.5e-07 60.1 48 45.8
Sp1g30070 Schrenkiella parvula HOM05D000004 ORTHO05D000002 1.5e-07 60.1 49 46.9
Ca_22397_v3 Cicer arietinum L. HOM05D019583 ORTHO05D025031 1.9e-07 59.7 73 34.2
ECA248G2061 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.9e-07 59.7 64 35.9
Nn5g27115 Nelumbo nucifera HOM05D000004 ORTHO05D000002 1.9e-07 59.7 116 31.9
BcaC05g28910 Brassica carinata HOM05D019583 ORTHO05D000002 2.5e-07 59.3 119 31.1
AUR62034871 Chenopodium quinoa HOM05D000004 ORTHO05D000002 2.5e-07 59.3 54 40.7
CAN.G532.42 Capsicum annuum HOM05D000004 ORTHO05D000002 4.2e-07 58.5 125 35.2
ECA233G2726 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.5e-07 58.2 52 42.3
ECA234G0220 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.5e-07 58.2 61 42.6
CAN.G1954.3 Capsicum annuum HOM05D000004 ORTHO05D000002 7.2e-07 57.8 52 42.3
SHI48351 Sapria himalayana HOM05D000004 ORTHO05D000002 7.2e-07 57.8 118 33.1
Hund24199 Selenicereus undatus HOM05D000004 ORTHO05D007707 7.2e-07 57.8 49 49.0
Psat1g210200 Pisum sativum HOM05D000004 ORTHO05D000002 9.4e-07 57.4 68 39.7
CSS0032753 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.6e-06 56.6 55 43.6
ECA233G4737 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.6e-06 56.6 74 37.8
BcaB03g14473 Brassica carinata HOM05D000004 ORTHO05D000002 2.1e-06 56.2 80 35.0
ECA236G2858 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.1e-06 56.2 48 45.8
Thhalv10012141m.g Eutrema salsugineum HOM05D000004 ORTHO05D000002 2.1e-06 56.2 129 31.0
Thhalv10026804m.g Eutrema salsugineum HOM05D000004 ORTHO05D000002 2.1e-06 56.2 134 28.4
Nn6g32083 Nelumbo nucifera HOM05D000004 ORTHO05D000002 2.1e-06 56.2 57 43.9
ECA232G1662 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.7e-06 55.8 50 42.0
CAN.G370.23 Capsicum annuum HOM05D000004 ORTHO05D000002 3.6e-06 55.5 139 32.4
ECA233G5891 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.6e-06 55.5 48 43.8
Aa31LG4G9850 Aethionema arabicum HOM05D000004 ORTHO05D000002 4.7e-06 55.1 121 27.3
ECA247G2578 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.7e-06 55.1 48 45.8
ECA233G3795 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.1e-06 54.7 121 28.1
ECA234G0112 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.1e-06 54.7 48 43.8
ECA238G2785 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.1e-06 54.7 48 41.7
ECA247G0045 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.1e-06 54.7 58 36.2
Manes.17G007266 Manihot esculenta HOM05D000004 ORTHO05D000002 6.1e-06 54.7 125 27.2
SHI24712 Sapria himalayana HOM05D000004 ORTHO05D000002 6.1e-06 54.7 117 30.8
Sopen01g010380 Solanum pennellii HOM05D000004 ORTHO05D000002 6.1e-06 54.7 44 45.5
ECA232G3081 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.0e-06 54.3 63 39.7
ECA233G6229 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.0e-06 54.3 123 30.1
Lalb_Chr06g0168691 Lupinus albus HOM05D000004 ORTHO05D000002 8.0e-06 54.3 63 41.3
QL09p022526 Quercus lobata HOM05D004457 ORTHO05D005282 8.0e-06 54.3 85 34.1
Sp7g03930 Schrenkiella parvula HOM05D011596 ORTHO05D000002 8.0e-06 54.3 49 44.9


User provided reference genes

Program Settings