Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G925.3 Capsicum annuum HOM05D005966 ORTHO05D007584 3.1e-66 255.0 129 100.0
CAN.G377.10 Capsicum annuum HOM05D005966 ORTHO05D007584 6.3e-35 151.0 85 84.7
PGSC0003DMG400020667 Solanum tuberosum HOM05D005966 ORTHO05D007584 7.0e-34 147.5 85 82.4
Solyc12g006650.2 Solanum lycopersicum HOM05D005966 ORTHO05D007584 4.5e-33 144.8 85 80.0
Nitab4.5_0007523g0010 Nicotiana tabacum HOM05D005966 ORTHO05D007584 7.7e-33 144.1 85 80.0
Nitab4.5_0010819g0010 Nicotiana tabacum HOM05D005966 ORTHO05D007584 1.0e-32 143.7 85 80.0
Sopen12g002600 Solanum pennellii HOM05D005966 ORTHO05D007584 1.3e-32 143.3 85 80.0
Peaxi162Scf00984g00027 Petunia axillaris HOM05D005966 ORTHO05D007584 6.5e-32 141.0 85 78.8
CAN.G1289.8 Capsicum annuum HOM05D005966 ORTHO05D007584 3.8e-24 115.2 66 83.3
Dinv36541 Davidia involucrata HOM05D005966 ORTHO05D007584 1.0e-21 107.1 84 61.9
Hma1.2p1_0018F.1_g012590 Hydrangea macrophylla HOM05D005966 ORTHO05D007584 2.3e-21 105.9 87 60.9
Lj7C631G5 Lonicera japonica HOM05D005966 ORTHO05D007584 6.8e-21 104.4 80 66.2
vmacro06121 Vaccinium macrocarpon HOM05D005966 ORTHO05D007584 8.9e-21 104.0 87 58.6
vmacro06181 Vaccinium macrocarpon HOM05D005966 ORTHO05D007584 8.9e-21 104.0 87 58.6
Oeu018459.1 Olea europaea HOM05D005966 ORTHO05D007584 2.0e-20 102.8 87 59.8
GSVIVG01015509001 Vitis vinifera HOM05D005966 ORTHO05D007584 4.4e-20 101.7 88 54.5
Sabra15G0082400 Salix brachista HOM05D005966 ORTHO05D007584 5.7e-20 101.3 87 55.2
Sabra15G0082900 Salix brachista HOM05D005966 ORTHO05D007584 5.7e-20 101.3 87 55.2
Oeu021589.1 Olea europaea HOM05D005966 ORTHO05D007584 9.8e-20 100.5 87 58.6
Rhsim03G0247300 Rhododendron simsii HOM05D005966 ORTHO05D007584 9.8e-20 100.5 87 56.3
Nn2g12002 Nelumbo nucifera HOM05D005966 ORTHO05D007584 1.3e-19 100.1 85 57.6
QL02p087915 Quercus lobata HOM05D005966 ORTHO05D007584 1.3e-19 100.1 88 58.0
Ciclev10007689m.g Citrus clementina HOM05D005966 ORTHO05D007584 1.7e-19 99.8 85 55.3
DCAR_014873 Daucus carota HOM05D005966 ORTHO05D007584 1.7e-19 99.8 85 56.5
Duzib187G1826 Durio zibethinus HOM05D005966 ORTHO05D007584 3.7e-19 98.6 88 58.0
Thecc.09G123800 Theobroma cacao HOM05D005966 ORTHO05D007584 3.7e-19 98.6 88 55.7
CiPaw.04G170200 Carya illinoinensis HOM05D005966 ORTHO05D007584 8.3e-19 97.4 88 55.7
Gohir.D05G018700 Gossypium hirsutum HOM05D005966 ORTHO05D007584 1.1e-18 97.1 88 58.0
Gorai.009G019100 Gossypium raimondii HOM05D005966 ORTHO05D007584 1.1e-18 97.1 88 58.0
Atru.chr7.1212 Acer truncatum HOM05D005966 ORTHO05D007584 2.4e-18 95.9 88 54.5
Actinidia07431 Actinidia chinensis HOM05D005966 ORTHO05D007584 2.4e-18 95.9 87 52.9
Actinidia26399 Actinidia chinensis HOM05D005966 ORTHO05D007584 2.4e-18 95.9 87 55.2
PSO170G3915 Papaver somniferum HOM05D005966 ORTHO05D007584 2.4e-18 95.9 85 55.3
Potri.015G057100 Populus trichocarpa HOM05D005966 ORTHO05D007584 2.4e-18 95.9 88 54.5
CSS0033485 Camellia sinensis var. sinensis HOM05D005966 ORTHO05D007584 3.2e-18 95.5 87 55.2
Gohir.A05G017800 Gossypium hirsutum HOM05D005966 ORTHO05D007584 4.1e-18 95.1 88 56.8
PSO455G0207 Papaver somniferum HOM05D005966 ORTHO05D007584 4.1e-18 95.1 85 54.1
Prupe.7G240500 Prunus persica HOM05D005966 ORTHO05D007584 4.1e-18 95.1 86 54.7
ECA236G0249 Erigeron canadensis HOM05D005966 ORTHO05D007584 7.0e-18 94.4 85 51.8
TAR636G0633 Trochodendron aralioides HOM05D005966 ORTHO05D007584 7.0e-18 94.4 85 54.1
Haze_25609 Corylus avellana HOM05D005966 ORTHO05D007584 9.2e-18 94.0 88 54.5
Eucgr.C04186 Eucalyptus grandis HOM05D005966 ORTHO05D007584 9.2e-18 94.0 85 51.8
Manes.06G049700 Manihot esculenta HOM05D005966 ORTHO05D007584 9.2e-18 94.0 87 51.7
Sed0002176 Sechium edule HOM05D005966 ORTHO05D007584 1.6e-17 93.2 86 52.3
Cpa.g.sc75.51 Carica papaya HOM05D005966 ORTHO05D007584 2.7e-17 92.4 88 52.3
Cfa003353 Carpinus fangiana HOM05D005966 ORTHO05D007584 2.7e-17 92.4 88 53.4
Lsat_1_v5_gn_8_59020 Lactuca sativa HOM05D005966 ORTHO05D007584 2.7e-17 92.4 85 52.9
SGA_v2.0_scaffold163G38051 Striga asiatica HOM05D005966 ORTHO05D007584 2.7e-17 92.4 87 51.7
MSTRG.14036 Avicennia marina HOM05D005966 ORTHO05D007584 3.5e-17 92.0 91 52.7
RcHm_v2.0_Chr7g0212931 Rosa chinensis HOM05D005966 ORTHO05D007584 7.8e-17 90.9 85 54.1
FvH4_5g23630 Fragaria vesca HOM05D005966 ORTHO05D007584 1.0e-16 90.5 85 54.1
FAN18G1628 Fragaria x ananassa HOM05D005966 ORTHO05D007584 1.0e-16 90.5 85 54.1
FAN18G2691 Fragaria x ananassa HOM05D005966 ORTHO05D007584 1.0e-16 90.5 85 54.1
Cc06_g08730 Coffea canephora HOM05D005966 ORTHO05D007584 1.3e-16 90.1 87 48.3
FAN13G2896 Fragaria x ananassa HOM05D005966 ORTHO05D007584 1.7e-16 89.7 85 54.1
MD15G1175600 Malus domestica HOM05D005966 ORTHO05D007584 1.7e-16 89.7 81 55.6
Lalb_Chr07g0178861 Lupinus albus HOM05D005966 ORTHO05D007584 3.9e-16 88.6 86 46.5
BraA03t10303Z Brassica rapa HOM05D005966 ORTHO05D007584 8.6e-16 87.4 101 45.5
Migut.E01544 Erythranthe guttata HOM05D005966 ORTHO05D007584 8.6e-16 87.4 87 51.7
A03p09900 Brassica napus HOM05D005966 ORTHO05D007584 1.1e-15 87.0 101 45.5
BolC3t13620H Brassica oleracea HOM05D005966 ORTHO05D007584 1.1e-15 87.0 101 45.5
Gohir.A07G035000 Gossypium hirsutum HOM05D005966 ORTHO05D007584 1.5e-15 86.7 88 51.1
C03p11480 Brassica napus HOM05D005966 ORTHO05D007584 1.9e-15 86.3 101 44.6
Glyma.05G009700 Glycine max HOM05D005966 ORTHO05D007584 1.9e-15 86.3 86 50.0
HanXRQChr04g0104201 Helianthus annuus HOM05D005966 ORTHO05D007584 1.9e-15 86.3 85 50.6
SalBow1G1471 Salvia bowleyana HOM05D005966 ORTHO05D007584 1.9e-15 86.3 87 50.6
Sp6g24230 Schrenkiella parvula HOM05D005966 ORTHO05D007584 1.9e-15 86.3 101 44.6
Gorai.001G041100 Gossypium raimondii HOM05D005966 ORTHO05D007584 2.5e-15 85.9 88 51.1
EL10Ac8g18623 Beta vulgaris HOM05D005966 ORTHO05D007584 3.3e-15 85.5 85 49.4
Thhalv10012923m.g Eutrema salsugineum HOM05D005966 ORTHO05D007584 3.3e-15 85.5 101 44.6
Carub.0006s1857 Capsella rubella HOM05D005966 ORTHO05D007584 5.6e-15 84.7 101 43.6
Glyma.17G117600 Glycine max HOM05D005966 ORTHO05D007584 5.6e-15 84.7 86 48.8
Medtr4g114100 Medicago truncatula HOM05D005966 ORTHO05D007584 5.6e-15 84.7 85 49.4
THA.LOC104799647 Tarenaya hassleriana HOM05D005966 ORTHO05D007584 5.6e-15 84.7 85 51.8
AUR62011094 Chenopodium quinoa HOM05D005966 ORTHO05D007584 7.3e-15 84.3 85 52.9
ClCG08G000940 Citrullus lanatus HOM05D005966 ORTHO05D007584 7.3e-15 84.3 90 47.8
Gohir.D07G039000 Gossypium hirsutum HOM05D005966 ORTHO05D007584 7.3e-15 84.3 98 50.0
MELO3C022187.2 Cucumis melo HOM05D005966 ORTHO05D007584 1.2e-14 83.6 90 46.7
AT5G20170 Arabidopsis thaliana HOM05D005966 ORTHO05D007584 2.8e-14 82.4 101 42.6
VMungo1215G0752 Vigna mungo HOM05D005966 ORTHO05D007584 2.8e-14 82.4 86 46.5
AUR62033484 Chenopodium quinoa HOM05D005966 ORTHO05D007584 3.6e-14 82.0 85 50.6
Phvul.003G161800 Phaseolus vulgaris HOM05D005966 ORTHO05D007584 3.6e-14 82.0 86 46.5
Aqoxy5G00491 Aquilegia oxysepala HOM05D005966 ORTHO05D007584 4.7e-14 81.6 87 46.0
CANSAT11G2564 Cannabis sativa HOM05D005966 ORTHO05D007584 4.7e-14 81.6 87 46.0
CsaV3_5G040100 Cucumis sativus L. HOM05D005966 ORTHO05D007584 4.7e-14 81.6 90 48.9
Lj4g0014642 Lotus japonicus HOM05D005966 ORTHO05D007584 4.7e-14 81.6 86 47.7
MD02G1034800 Malus domestica HOM05D005966 ORTHO05D007584 6.2e-14 81.3 70 55.7
Ca_21691_v3 Cicer arietinum L. HOM05D005966 ORTHO05D007584 8.0e-14 80.9 86 47.7
Aa31LG1G14440 Aethionema arabicum HOM05D005966 ORTHO05D007584 1.1e-13 80.5 101 41.6
CARHR192650 Cardamine hirsuta HOM05D005966 ORTHO05D007584 1.4e-13 80.1 98 41.8
Psat4g039400 Pisum sativum HOM05D005966 ORTHO05D007584 1.4e-13 80.1 86 45.3
AL6G31730 Arabidopsis lyrata HOM05D005966 ORTHO05D007584 1.8e-13 79.7 101 41.6
TPR.G10691 Trifolium pratense HOM05D005966 ORTHO05D007584 3.1e-13 79.0 85 47.1
unitig_578.g16582 Utricularia gibba HOM05D005966 ORTHO05D007584 3.1e-13 79.0 70 54.3
arahy.Tifrunner.gnm1.ann1.Z0FLIL Arachis hypogaea HOM05D005966 ORTHO05D007584 5.2e-13 78.2 85 43.5
arahy.Tifrunner.gnm1.ann1.QB31BF Arachis hypogaea HOM05D005966 ORTHO05D007584 2.0e-12 76.3 86 44.2
CDE01G0041 Ceratophyllum demersum HOM05D005966 ORTHO05D007584 2.0e-12 76.3 89 46.1
Ah.14g080180 Amaranthus hybridus HOM05D005966 ORTHO05D007584 7.5e-12 74.3 83 44.6
PGR102G3358 Punica granatum HOM05D005966 ORTHO05D007584 9.8e-12 73.9 59 55.9
HPP92_009844 Vanilla planifolia HOM05D005966 ORTHO05D007584 2.2e-11 72.8 83 45.8
Os12g0638600 Oryza sativa ssp. japonica HOM05D005966 ORTHO05D007584 6.4e-11 71.2 88 42.0
Zm00001eb334260 Zea mays HOM05D005966 ORTHO05D007584 1.1e-10 70.5 88 42.0
Hma1.2p1_0090F.1_g045710 Hydrangea macrophylla HOM05D005966 ORTHO05D007584 3.2e-10 68.9 61 47.5
Zm00001eb207940 Zea mays HOM05D005966 ORTHO05D007584 5.4e-10 68.2 88 40.9
Hund26492 Selenicereus undatus HOM05D005966 ORTHO05D007584 1.2e-09 67.0 86 41.9
SEGI_37567 Sequoiadendron giganteum HOM05D005966 ORTHO05D007584 3.5e-09 65.5 87 35.6
ATR1156G034 Amborella trichopoda HOM05D005966 ORTHO05D007584 4.6e-09 65.1 83 42.2
TAR625G1387 Trochodendron aralioides HOM05D005966 ORTHO05D007584 1.3e-08 63.5 54 53.7
Sc08g0006730 Simmondsia chinensis HOM05D005966 ORTHO05D007584 5.0e-08 61.6 67 46.3
SHI18656 Sapria himalayana HOM05D005966 ORTHO05D007584 3.6e-06 55.5 63 44.4


User provided reference genes

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