Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G8813.1 Capsicum annuum HOM05D004629 ORTHO05D006604 3.1e-34 147.9 75 100.0
CAN.G140.2 Capsicum annuum HOM05D004629 ORTHO05D006604 4.2e-23 110.9 59 91.5
Solyc01g006280.3 Solanum lycopersicum HOM05D004629 ORTHO05D006604 3.6e-22 107.8 59 88.1
Sopen01g002270 Solanum pennellii HOM05D004629 ORTHO05D006604 3.6e-22 107.8 59 88.1
SalBow2G2882 Salvia bowleyana HOM05D004629 ORTHO05D006604 6.1e-22 107.1 59 86.4
Nitab4.5_0005132g0060 Nicotiana tabacum HOM05D004629 ORTHO05D006604 3.0e-21 104.8 59 84.7
PGSC0003DMG400032146 Solanum tuberosum HOM05D004629 ORTHO05D006604 3.0e-21 104.8 59 84.7
Peaxi162Scf00192g00022 Petunia axillaris HOM05D004629 ORTHO05D006604 1.5e-20 102.4 54 90.7
MSTRG.18392 Avicennia marina HOM05D004629 ORTHO05D006604 1.7e-19 99.0 72 69.4
Cc01_g02770 Coffea canephora HOM05D004629 ORTHO05D006604 2.2e-19 98.6 72 68.1
SGA_v2.0_scaffold1G00754 Striga asiatica HOM05D004629 ORTHO05D006604 3.7e-19 97.8 72 68.1
FvH4_3g44470 Fragaria vesca HOM05D004629 ORTHO05D006604 4.8e-19 97.4 70 68.6
FAN11G0302 Fragaria x ananassa HOM05D004629 ORTHO05D006604 4.8e-19 97.4 70 68.6
FAN16G0373 Fragaria x ananassa HOM05D004629 ORTHO05D006604 4.8e-19 97.4 70 68.6
FAN25G1401 Fragaria x ananassa HOM05D004629 ORTHO05D006604 4.8e-19 97.4 70 68.6
TWI60G1346 Tripterygium wilfordii HOM05D004629 ORTHO05D006604 4.8e-19 97.4 57 80.7
Migut.N02273 Erythranthe guttata HOM05D004629 ORTHO05D006604 8.2e-19 96.7 61 77.0
arahy.Tifrunner.gnm1.ann1.MLY2RP Arachis hypogaea HOM05D004629 ORTHO05D006604 1.1e-18 96.3 70 68.6
EL10Ac4g10337 Beta vulgaris HOM05D004629 ORTHO05D006604 1.1e-18 96.3 70 68.6
Oeu038860.1 Olea europaea HOM05D004629 ORTHO05D006604 1.1e-18 96.3 61 75.4
Oeu046515.2 Olea europaea HOM05D004629 ORTHO05D006604 1.1e-18 96.3 61 75.4
Actinidia06301 Actinidia chinensis HOM05D004629 ORTHO05D006604 1.4e-18 95.9 70 68.6
Ah.04g161630 Amaranthus hybridus HOM05D004629 ORTHO05D006604 1.4e-18 95.9 70 67.1
RcHm_v2.0_Chr5g0081161 Rosa chinensis HOM05D004629 ORTHO05D006604 1.4e-18 95.9 70 67.1
Ciclev10014585m.g Citrus clementina HOM05D004629 ORTHO05D006604 1.8e-18 95.5 70 67.1
Lj2A677G23 Lonicera japonica HOM05D004629 ORTHO05D006604 1.8e-18 95.5 70 67.1
Atru.chr3.2163_Atru.chr3.2169 Acer truncatum HOM05D004629 ORTHO05D006604 2.4e-18 95.1 70 67.1
Aqoxy2G00099 Aquilegia oxysepala HOM05D004629 ORTHO05D006604 2.4e-18 95.1 70 67.1
Aqoxy5G02405 Aquilegia oxysepala HOM05D004629 ORTHO05D006604 2.4e-18 95.1 70 67.1
CiPaw.13G171100 Carya illinoinensis HOM05D004629 ORTHO05D006604 2.4e-18 95.1 70 67.1
Nn2g15715 Nelumbo nucifera HOM05D004629 ORTHO05D019743 2.4e-18 95.1 70 68.6
Thecc.10G155600 Theobroma cacao HOM05D004629 ORTHO05D006604 2.4e-18 95.1 70 67.1
Lalb_Chr06g0164051 Lupinus albus HOM05D004629 ORTHO05D006604 3.1e-18 94.7 70 65.7
Rhsim01G0186400 Rhododendron simsii HOM05D004629 ORTHO05D006604 3.1e-18 94.7 70 65.7
MBI13_g20490_MAGBIO Magnolia biondii HOM05D004629 ORTHO05D006604 4.1e-18 94.4 59 76.3
Nn7g35984 Nelumbo nucifera HOM05D004629 ORTHO05D006604 4.1e-18 94.4 70 67.1
VMungo0720G3137 Vigna mungo HOM05D004629 ORTHO05D006604 4.1e-18 94.4 69 68.1
AT1G50480 Arabidopsis thaliana HOM05D004629 ORTHO05D006604 5.3e-18 94.0 61 73.8
arahy.Tifrunner.gnm1.ann1.XFL7KU Arachis hypogaea HOM05D004629 ORTHO05D006604 5.3e-18 94.0 70 67.1
CSS0018441 Camellia sinensis var. sinensis HOM05D004629 ORTHO05D006604 5.3e-18 94.0 69 66.7
Cpa.g.sc119.97 Carica papaya HOM05D004629 ORTHO05D006604 5.3e-18 94.0 70 67.1
Ciclev10014598m.g Citrus clementina HOM05D004629 ORTHO05D006604 5.3e-18 94.0 70 65.7
Lj5g0025778 Lotus japonicus HOM05D004629 ORTHO05D006604 5.3e-18 94.0 70 65.7
Actinidia39366 Actinidia chinensis HOM05D004629 ORTHO05D006604 7.0e-18 93.6 70 67.1
Gohir.A05G400500 Gossypium hirsutum HOM05D004629 ORTHO05D006604 7.0e-18 93.6 70 65.7
Gorai.012G017900 Gossypium raimondii HOM05D004629 ORTHO05D006604 7.0e-18 93.6 70 65.7
QL01p010068 Quercus lobata HOM05D004629 ORTHO05D006604 7.0e-18 93.6 57 77.2
Aqoxy3G01857 Aquilegia oxysepala HOM05D004629 ORTHO05D006604 9.1e-18 93.2 70 65.7
AUR62000039 Chenopodium quinoa HOM05D004629 ORTHO05D006604 1.2e-17 92.8 70 65.7
AL1G58130 Arabidopsis lyrata HOM05D004629 ORTHO05D006604 1.6e-17 92.4 61 72.1
Glyma.20G243700 Glycine max HOM05D004629 ORTHO05D006604 1.6e-17 92.4 69 66.7
PSO339G6259 Papaver somniferum HOM05D004629 ORTHO05D006604 1.6e-17 92.4 70 67.1
PSO384G3664 Papaver somniferum HOM05D004629 ORTHO05D006604 1.6e-17 92.4 70 67.1
unitig_22.g5472 Utricularia gibba HOM05D004629 ORTHO05D006604 1.6e-17 92.4 52 86.5
Lalb_Chr02g0143781 Lupinus albus HOM05D004629 ORTHO05D006604 2.0e-17 92.0 69 63.8
Phvul.007G006400 Phaseolus vulgaris HOM05D004629 ORTHO05D006604 2.0e-17 92.0 69 66.7
Potri.001G010800 Populus trichocarpa HOM05D004629 ORTHO05D006604 2.0e-17 92.0 70 65.7
Potri.003G215100 Populus trichocarpa HOM05D004629 ORTHO05D006604 2.0e-17 92.0 70 64.3
TAR369G0186 Trochodendron aralioides HOM05D004629 ORTHO05D006604 2.0e-17 92.0 51 86.3
Gohir.D04G015400 Gossypium hirsutum HOM05D004629 ORTHO05D006604 2.6e-17 91.7 70 64.3
CARHR040480 Cardamine hirsuta HOM05D004629 ORTHO05D006604 3.5e-17 91.3 58 75.9
Sabra03G0160400 Salix brachista HOM05D004629 ORTHO05D006604 3.5e-17 91.3 70 64.3
THA.LOC104806618 Tarenaya hassleriana HOM05D004629 ORTHO05D006604 3.5e-17 91.3 69 66.7
ClCG03G013940 Citrullus lanatus HOM05D004629 ORTHO05D006604 4.5e-17 90.9 57 75.4
Glyma.10G112700 Glycine max HOM05D004629 ORTHO05D006604 4.5e-17 90.9 69 65.2
Prupe.6G013000 Prunus persica HOM05D004629 ORTHO05D006604 4.5e-17 90.9 70 62.9
MD11G1015100 Malus domestica HOM05D004629 ORTHO05D006604 5.9e-17 90.5 70 62.9
Aa31LG10G3810 Aethionema arabicum HOM05D004629 ORTHO05D006604 7.7e-17 90.1 58 74.1
MD03G1012400 Malus domestica HOM05D004629 ORTHO05D006604 7.7e-17 90.1 70 62.9
Manes.03G089535 Manihot esculenta HOM05D004629 ORTHO05D006604 7.7e-17 90.1 70 62.9
Sp1g37320 Schrenkiella parvula HOM05D004629 ORTHO05D006604 7.7e-17 90.1 58 74.1
CANSAT11G0664 Cannabis sativa HOM05D004629 ORTHO05D006604 1.0e-16 89.7 70 62.9
Thhalv10011315m.g Eutrema salsugineum HOM05D004629 ORTHO05D006604 1.0e-16 89.7 58 72.4
Hund21652 Selenicereus undatus HOM05D004629 ORTHO05D006604 1.0e-16 89.7 70 62.9
BcaB02g11149 Brassica carinata HOM05D004629 ORTHO05D006604 1.3e-16 89.4 69 63.8
BcaB07g33484 Brassica carinata HOM05D004629 ORTHO05D006604 1.3e-16 89.4 69 63.8
BcaC08g43218 Brassica carinata HOM05D004629 ORTHO05D006604 1.3e-16 89.4 69 63.8
A06p03100 Brassica napus HOM05D004629 ORTHO05D006604 1.3e-16 89.4 69 63.8
C06p05660 Brassica napus HOM05D004629 ORTHO05D006604 1.3e-16 89.4 69 63.8
BolC6t35677H Brassica oleracea HOM05D004629 ORTHO05D006604 1.3e-16 89.4 69 63.8
BraA06t23523Z Brassica rapa HOM05D004629 ORTHO05D006604 1.3e-16 89.4 69 63.8
Dinv36331 Davidia involucrata HOM05D004629 ORTHO05D006604 1.3e-16 89.4 70 62.9
HanXRQChr07g0196791 Helianthus annuus HOM05D004629 ORTHO05D006604 1.3e-16 89.4 69 63.8
PGR119G2006 Punica granatum HOM05D004629 ORTHO05D006604 1.3e-16 89.4 72 59.7
Thecc.10G098800 Theobroma cacao HOM05D004629 ORTHO05D006604 1.3e-16 89.4 59 71.2
Carub.0001s3955 Capsella rubella HOM05D004629 ORTHO05D006604 1.7e-16 89.0 58 74.1
Glyma.10G293800 Glycine max HOM05D004629 ORTHO05D006604 1.7e-16 89.0 67 65.7
BcaB02g11151 Brassica carinata HOM05D004629 ORTHO05D006604 2.2e-16 88.6 72 59.7
BcaC05g27413 Brassica carinata HOM05D004629 ORTHO05D006604 2.2e-16 88.6 72 59.7
A05p20130 Brassica napus HOM05D004629 ORTHO05D006604 2.2e-16 88.6 69 62.3
C05p33610 Brassica napus HOM05D004629 ORTHO05D006604 2.2e-16 88.6 72 59.7
BolC5t32091H Brassica oleracea HOM05D004629 ORTHO05D006604 2.2e-16 88.6 72 59.7
CDE05G1698 Ceratophyllum demersum HOM05D004635 ORTHO05D005899 2.2e-16 88.6 70 60.0
Sed0008832 Sechium edule HOM05D004629 ORTHO05D006604 2.2e-16 88.6 57 75.4
TPR.G10403 Trifolium pratense HOM05D004629 ORTHO05D006604 2.2e-16 88.6 67 64.2
Sc09g0000300 Simmondsia chinensis HOM05D004629 ORTHO05D006604 2.9e-16 88.2 57 73.7
Haze_23000 Corylus avellana HOM05D004629 ORTHO05D006604 3.8e-16 87.8 70 60.0
ECA238G3810 Erigeron canadensis HOM05D004629 ORTHO05D006604 3.8e-16 87.8 69 62.3
BraA05t20921Z Brassica rapa HOM05D004629 ORTHO05D006604 5.0e-16 87.4 69 62.3
Duzib128G1447 Durio zibethinus HOM05D004629 ORTHO05D006604 5.0e-16 87.4 70 61.4
Lsat_1_v5_gn_2_101421 Lactuca sativa HOM05D004629 ORTHO05D006604 5.0e-16 87.4 69 62.3
GSVIVG01025376001 Vitis vinifera HOM05D004629 ORTHO05D006604 5.0e-16 87.4 70 62.9
CDE05G0953 Ceratophyllum demersum HOM05D004629 ORTHO05D006604 6.5e-16 87.0 70 58.6
Ca_11347_v3 Cicer arietinum L. HOM05D004629 ORTHO05D006604 6.5e-16 87.0 67 61.2
MELO3C015653.2 Cucumis melo HOM05D004629 ORTHO05D006604 8.5e-16 86.7 57 71.9
CsaV3_1G042270 Cucumis sativus L. HOM05D004629 ORTHO05D006604 8.5e-16 86.7 57 71.9
DCAR_024372 Daucus carota HOM05D004629 ORTHO05D006604 8.5e-16 86.7 56 75.0
Eucgr.B02610 Eucalyptus grandis HOM05D004629 ORTHO05D006604 8.5e-16 86.7 59 71.2
Cfa009633 Carpinus fangiana HOM05D004629 ORTHO05D006604 1.1e-15 86.3 70 60.0
Psat6g238880 Pisum sativum HOM05D004629 ORTHO05D006604 1.1e-15 86.3 67 61.2
HPP92_005763 Vanilla planifolia HOM05D004629 ORTHO05D006604 1.1e-15 86.3 70 61.4
Medtr1g116140 Medicago truncatula HOM05D004629 ORTHO05D006604 1.5e-15 85.9 67 61.2
Medtr5g059390 Medicago truncatula HOM05D004629 ORTHO05D006604 1.5e-15 85.9 67 61.2
Psat2g086520 Pisum sativum HOM05D004629 ORTHO05D006604 1.5e-15 85.9 67 59.7
ATR0598G234 Amborella trichopoda HOM05D004629 ORTHO05D006604 5.5e-15 84.0 69 59.4
Zm00001eb314490 Zea mays HOM05D004629 ORTHO05D006604 1.6e-14 82.4 58 69.0
ECA248G3511 Erigeron canadensis HOM05D004629 ORTHO05D006604 2.1e-14 82.0 65 61.5
AagrBONN_evm.TU.Sc2ySwM_117.3293 Anthoceros agrestis HOM05D004629 ORTHO05D006604 8.0e-14 80.1 72 55.6
Pp3c15_21130 Physcomitrium patens HOM05D004629 ORTHO05D006604 2.3e-13 78.6 67 58.2
HanXRQChr11g0344961 Helianthus annuus HOM05D004629 ORTHO05D006604 3.0e-13 78.2 65 61.5
Os09g0446800 Oryza sativa ssp. japonica HOM05D004629 ORTHO05D006604 4.0e-13 77.8 58 63.8
Lsat_1_v5_gn_1_68420 Lactuca sativa HOM05D004629 ORTHO05D006604 3.4e-12 74.7 65 55.4
DCAR_017261 Daucus carota HOM05D004629 ORTHO05D006604 1.0e-08 63.2 47 63.8
Mapoly0009s0223 Marchantia polymorpha HOM05D004629 ORTHO05D006604 2.9e-08 61.6 72 48.6
CBR_g29353 Chara braunii HOM05D004629 ORTHO05D006604 4.2e-07 57.8 61 52.5
Cre13.g566000 Chlamydomonas reinhardtii HOM05D004629 ORTHO05D006604 4.7e-06 54.3 65 46.2


User provided reference genes

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