Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G853.18 Capsicum annuum HOM05D004653 ORTHO05D006221 0.0e+00 1091.3 533 100.0
Solyc03g113780.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 2.7e-281 971.5 536 89.7
PGSC0003DMG401024581 Solanum tuberosum HOM05D004653 ORTHO05D006221 4.6e-281 970.7 529 90.7
Sopen03g032830 Solanum pennellii HOM05D004653 ORTHO05D006221 5.6e-279 963.8 529 90.4
Nitab4.5_0000642g0300 Nicotiana tabacum HOM05D004653 ORTHO05D006221 1.9e-250 869.0 538 82.0
COL.COLO4_11961 Corchorus olitorius HOM05D004653 ORTHO05D006221 3.2e-234 815.1 524 76.0
CSS0037453 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 4.4e-231 804.7 543 71.8
Migut.I00061 Erythranthe guttata HOM05D004653 ORTHO05D006221 2.2e-230 802.4 542 72.5
Potri.002G102600 Populus trichocarpa HOM05D004653 ORTHO05D006221 1.1e-229 800.0 462 80.7
Actinidia30803 Actinidia chinensis HOM05D004653 ORTHO05D006221 1.5e-228 796.2 548 70.8
QL09p016947 Quercus lobata HOM05D004653 ORTHO05D006221 4.5e-228 794.7 492 76.6
GSVIVG01009125001 Vitis vinifera HOM05D004653 ORTHO05D006221 4.5e-228 794.7 528 72.9
Hma1.2p1_0961F.1_g241730 Hydrangea macrophylla HOM05D004653 ORTHO05D006221 1.0e-227 793.5 482 77.8
Atru.chr13.1058 Acer truncatum HOM05D004653 ORTHO05D006221 2.9e-227 792.0 530 72.5
Thecc.08G066400 Theobroma cacao HOM05D004653 ORTHO05D006221 2.9e-227 792.0 460 79.8
TWI56G0982 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 1.4e-226 789.6 542 71.4
CiPaw.07G169200 Carya illinoinensis HOM05D004653 ORTHO05D006221 1.9e-226 789.3 462 79.4
Nn1g05497 Nelumbo nucifera HOM05D004653 ORTHO05D006221 9.4e-226 786.9 491 76.0
Gorai.009G279800 Gossypium raimondii HOM05D004653 ORTHO05D006221 1.2e-225 786.6 539 71.6
SalBow5G1317 Salvia bowleyana HOM05D004653 ORTHO05D006221 1.8e-224 782.7 551 71.0
Lj1g0013887 Lotus japonicus HOM05D004653 ORTHO05D006221 1.1e-223 780.0 534 70.2
Medtr3g100890 Medicago truncatula HOM05D004653 ORTHO05D006221 1.5e-223 779.6 521 71.4
TPR.G26053 Trifolium pratense HOM05D004653 ORTHO05D006221 1.5e-223 779.6 472 76.5
Gohir.D05G267700 Gossypium hirsutum HOM05D004653 ORTHO05D006221 2.0e-223 779.2 539 71.2
AUR62027845 Chenopodium quinoa HOM05D004653 ORTHO05D006221 3.3e-223 778.5 544 71.0
MBI06_g18790_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 5.7e-223 777.7 515 73.0
Phvul.009G037700 Phaseolus vulgaris HOM05D004653 ORTHO05D006221 5.7e-223 777.7 467 77.5
SGA_v2.0_scaffold25G10868 Striga asiatica HOM05D004653 ORTHO05D006221 7.4e-223 777.3 544 71.0
Prupe.1G526800 Prunus persica HOM05D004653 ORTHO05D006221 1.3e-222 776.5 468 77.4
Lj4C92G16 Lonicera japonica HOM05D004653 ORTHO05D006221 1.7e-222 776.2 464 78.2
Cfa013708 Carpinus fangiana HOM05D004653 ORTHO05D006221 2.2e-222 775.8 467 77.3
Ciclev10000790m.g Citrus clementina HOM05D004653 ORTHO05D006221 2.2e-222 775.8 541 69.5
AUR62019003 Chenopodium quinoa HOM05D004653 ORTHO05D006221 4.8e-222 774.6 544 70.8
FAN18G1441 Fragaria x ananassa HOM05D004653 ORTHO05D006221 4.8e-222 774.6 481 76.3
FAN04G0673 Fragaria x ananassa HOM05D004653 ORTHO05D006221 6.3e-222 774.2 481 76.1
MSTRG.23086 Avicennia marina HOM05D004653 ORTHO05D006221 8.2e-222 773.9 462 79.0
FvH4_5g35940 Fragaria vesca HOM05D004653 ORTHO05D006221 1.1e-221 773.5 481 76.1
Manes.18G062000 Manihot esculenta HOM05D004653 ORTHO05D006221 1.8e-221 772.7 541 70.1
Psat5g045400 Pisum sativum HOM05D004653 ORTHO05D006221 4.1e-221 771.5 521 70.4
RcHm_v2.0_Chr7g0237681 Rosa chinensis HOM05D004653 ORTHO05D006221 7.0e-221 770.8 538 70.1
MD15G1380600 Malus domestica HOM05D004653 ORTHO05D006221 9.1e-221 770.4 476 76.3
Manes.02G147500 Manihot esculenta HOM05D004653 ORTHO05D006221 9.1e-221 770.4 462 77.5
VMungo1309G1466 Vigna mungo HOM05D004653 ORTHO05D006221 9.1e-221 770.4 467 76.9
TAR376G1013 Trochodendron aralioides HOM05D004653 ORTHO05D006221 2.6e-220 768.8 547 69.7
ClCG11G014410 Citrullus lanatus HOM05D004653 ORTHO05D006221 3.5e-220 768.5 533 67.7
PSO675G8871 Papaver somniferum HOM05D004653 ORTHO05D006221 7.7e-220 767.3 462 75.8
MD08G1191800 Malus domestica HOM05D004653 ORTHO05D006221 1.0e-219 766.9 462 77.5
FAN08G1395 Fragaria x ananassa HOM05D004653 ORTHO05D006221 1.3e-219 766.5 481 75.7
CANSAT11G2183 Cannabis sativa HOM05D004653 ORTHO05D006221 1.7e-219 766.1 462 77.3
arahy.Tifrunner.gnm1.ann1.QAT0QL Arachis hypogaea HOM05D004653 ORTHO05D006221 2.2e-219 765.8 460 76.3
PSO541G1602 Papaver somniferum HOM05D004653 ORTHO05D006221 2.2e-219 765.8 462 75.5
Cpa.g.sc36.204 Carica papaya HOM05D004653 ORTHO05D006221 6.5e-219 764.2 457 78.1
CSS0025013 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 8.5e-219 763.8 461 77.2
Lalb_Chr23g0270281 Lupinus albus HOM05D004653 ORTHO05D006221 8.5e-219 763.8 461 77.2
Aqoxy6G01474 Aquilegia oxysepala HOM05D004653 ORTHO05D006221 5.5e-218 761.1 478 74.7
Ca_15984_v3 Cicer arietinum L. HOM05D004653 ORTHO05D006221 7.2e-218 760.8 461 76.4
MELO3C003541.2 Cucumis melo HOM05D004653 ORTHO05D006221 2.1e-217 759.2 515 69.3
CsaV3_3G047810 Cucumis sativus L. HOM05D004653 ORTHO05D006221 2.1e-217 759.2 461 75.1
Sabra02G0080400 Salix brachista HOM05D004653 ORTHO05D006221 2.1e-217 759.2 622 62.4
HanXRQChr02g0047071 Helianthus annuus HOM05D004653 ORTHO05D006221 8.0e-217 757.3 532 70.7
Lalb_Chr11g0065151 Lupinus albus HOM05D004653 ORTHO05D006221 8.0e-217 757.3 463 77.1
Ciclev10001057m.g Citrus clementina HOM05D004653 ORTHO05D006221 1.4e-216 756.5 461 75.7
THA.LOC104799811 Tarenaya hassleriana HOM05D004653 ORTHO05D006221 2.6e-215 752.3 528 68.4
TWI36G0595 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 2.6e-215 752.3 462 76.2
Eucgr.F02123 Eucalyptus grandis HOM05D004653 ORTHO05D006221 5.7e-215 751.1 462 74.7
PGR031G0949 Punica granatum HOM05D004653 ORTHO05D006221 5.7e-215 751.1 543 67.8
Hund26999 Selenicereus undatus HOM05D004653 ORTHO05D006221 7.5e-215 750.7 541 67.5
Sed0021217 Sechium edule HOM05D004653 ORTHO05D006221 1.4e-213 746.5 533 67.0
ATR0022G001 Amborella trichopoda HOM05D004653 ORTHO05D006221 3.1e-213 745.3 514 69.6
AT5G49970 Arabidopsis thaliana HOM05D004653 ORTHO05D006221 9.1e-213 743.8 459 74.5
Haze_22352 Corylus avellana HOM05D004653 ORTHO05D006221 1.2e-212 743.4 545 66.4
ECA247G2604 Erigeron canadensis HOM05D004653 ORTHO05D006221 2.0e-212 742.7 461 77.2
DCAR_012873 Daucus carota HOM05D004653 ORTHO05D006221 1.3e-211 740.0 504 71.6
Sp6g11760 Schrenkiella parvula HOM05D004653 ORTHO05D006221 1.3e-211 740.0 495 70.3
Cc04_g13590 Coffea canephora HOM05D004653 ORTHO05D006221 1.7e-211 739.6 436 78.9
Lsat_1_v5_gn_1_2401 Lactuca sativa HOM05D004653 ORTHO05D006221 2.2e-211 739.2 440 79.3
FAN13G0646 Fragaria x ananassa HOM05D004653 ORTHO05D006221 5.0e-211 738.0 461 76.6
Os10g0377800 Oryza sativa ssp. japonica HOM05D004653 ORTHO05D006221 6.5e-211 737.6 466 73.8
Thhalv10013217m.g Eutrema salsugineum HOM05D004653 ORTHO05D006221 1.5e-210 736.5 460 73.5
CARHR258740 Cardamine hirsuta HOM05D004653 ORTHO05D006221 2.5e-210 735.7 459 74.1
A03p27590 Brassica napus HOM05D004653 ORTHO05D006221 7.2e-210 734.2 460 73.7
EL10Ac1g01097 Beta vulgaris HOM05D004653 ORTHO05D006221 9.4e-210 733.8 490 72.9
Carub.0008s0987 Capsella rubella HOM05D004653 ORTHO05D006221 1.2e-209 733.4 459 72.8
vmacro22331 Vaccinium macrocarpon HOM05D004653 ORTHO05D006221 1.2e-209 733.4 654 58.3
BcaC01g04840 Brassica carinata HOM05D004653 ORTHO05D006221 2.1e-209 732.6 477 72.1
BraA03t11972Z Brassica rapa HOM05D004653 ORTHO05D006221 6.1e-209 731.1 476 71.8
AL8G23940 Arabidopsis lyrata HOM05D004653 ORTHO05D006221 8.0e-209 730.7 459 73.2
Rhsim06G0074900 Rhododendron simsii HOM05D004653 ORTHO05D006221 5.2e-208 728.0 480 73.1
Gohir.A05G265600 Gossypium hirsutum HOM05D004653 ORTHO05D006221 1.5e-207 726.5 539 68.3
TAR628G1442 Trochodendron aralioides HOM05D004653 ORTHO05D006221 1.5e-207 726.5 462 73.2
BolC3t15652H Brassica oleracea HOM05D004653 ORTHO05D006221 3.4e-207 725.3 460 73.0
arahy.Tifrunner.gnm1.ann1.Y1WP0G Arachis hypogaea HOM05D004653 ORTHO05D006221 4.4e-207 724.9 532 66.4
BcaB01g02929 Brassica carinata HOM05D004653 ORTHO05D006221 5.7e-207 724.5 496 69.2
C03p33300 Brassica napus HOM05D004653 ORTHO05D006221 5.7e-207 724.5 460 73.0
CDE05G0914 Ceratophyllum demersum HOM05D004653 ORTHO05D006221 3.1e-205 718.8 460 72.4
HPP92_004087 Vanilla planifolia HOM05D004653 ORTHO05D006221 7.7e-204 714.1 511 66.9
Aa31sc34G110 Aethionema arabicum HOM05D004653 ORTHO05D006221 1.0e-203 713.8 477 69.4
HPP92_004102 Vanilla planifolia HOM05D004653 ORTHO05D006221 5.0e-203 711.4 540 65.2
unitig_26.g9628 Utricularia gibba HOM05D004653 ORTHO05D006221 2.5e-202 709.1 543 63.7
Sc01g0000970 Simmondsia chinensis HOM05D004653 ORTHO05D006221 6.1e-201 704.5 421 77.0
Glyma.04G093600 Glycine max HOM05D004653 ORTHO05D006221 2.8e-198 695.7 549 63.0
Sc01g0000980 Simmondsia chinensis HOM05D004653 ORTHO05D006221 1.1e-197 693.7 421 75.8
Peaxi162Scf00017g00233 Petunia axillaris HOM05D004653 ORTHO05D006221 2.4e-197 692.6 439 80.9
Dinv44830 Davidia involucrata HOM05D004653 ORTHO05D006221 7.5e-191 671.0 470 71.3
MBI02_g18292_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 8.3e-190 667.5 462 68.2
Mapoly0107s0030 Marchantia polymorpha HOM05D004653 ORTHO05D006221 3.0e-187 659.1 466 67.0
Oeu042971.1 Olea europaea HOM05D004653 ORTHO05D006221 6.6e-187 657.9 442 70.1
CAN.G853.20 Capsicum annuum HOM05D004653 ORTHO05D006221 8.6e-187 657.5 460 65.9
Cc07_g19270 Coffea canephora HOM05D004653 ORTHO05D006221 1.8e-184 649.8 460 65.4
Nitab4.5_0024258g0010 Nicotiana tabacum HOM05D004653 ORTHO05D006221 6.8e-184 647.9 390 84.6
Sopen03g032820 Solanum pennellii HOM05D004653 ORTHO05D006221 9.8e-183 644.0 463 65.2
Solyc03g113770.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 7.8e-180 634.4 460 64.6
Oeu042973.1 Olea europaea HOM05D004653 ORTHO05D006221 3.0e-179 632.5 421 70.8
SGA_v2.0_scaffold467G52033 Striga asiatica HOM05D004653 ORTHO05D006221 1.9e-178 629.8 459 66.7
SMO356G0546 Selaginella moellendorffii HOM05D004653 ORTHO05D006221 9.5e-178 627.5 441 65.3
Pp3c2_19610 Physcomitrium patens HOM05D004653 ORTHO05D006221 2.1e-177 626.3 473 61.9
Oeu018527.2 Olea europaea HOM05D004653 ORTHO05D006221 2.2e-174 616.3 465 66.5
SalBow5G2478 Salvia bowleyana HOM05D004653 ORTHO05D006221 2.1e-172 609.8 452 63.5
Migut.I00062 Erythranthe guttata HOM05D004653 ORTHO05D006221 1.5e-170 603.6 453 62.9
Nitab4.5_0007586g0050 Nicotiana tabacum HOM05D004653 ORTHO05D006221 3.6e-169 599.0 463 62.6
CSS0007986 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 1.3e-163 580.5 348 77.3
AagrBONN_evm.TU.Sc2ySwM_368.1227 Anthoceros agrestis HOM05D004653 ORTHO05D006221 3.3e-154 549.3 465 57.8
MSTRG.23084 Avicennia marina HOM05D004653 ORTHO05D006221 1.8e-139 500.4 348 68.7
Cre08.g378200 Chlamydomonas reinhardtii HOM05D004653 ORTHO05D006221 1.9e-125 453.8 502 48.8
PGSC0003DMG400024580 Solanum tuberosum HOM05D004653 ORTHO05D006221 1.5e-122 444.1 418 51.7
Zm00001eb027880 Zea mays HOM05D004653 ORTHO05D006221 1.0e-118 431.4 346 65.3
MBI17_g06166_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 5.5e-117 425.6 316 65.5
Lalb_Chr23g0270171 Lupinus albus HOM05D004653 ORTHO05D006221 1.3e-113 414.5 255 75.7
CSS0017284 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 1.9e-101 374.0 261 67.0
Actinidia10360 Actinidia chinensis HOM05D004653 ORTHO05D006221 2.9e-94 350.1 326 56.1
CBR_g24311 Chara braunii HOM05D000019 ORTHO05D000353 2.8e-89 333.6 267 58.4
Glyma.06G095500 Glycine max HOM05D004653 ORTHO05D006221 1.1e-85 321.6 203 74.4
SEGI_17033 Sequoiadendron giganteum HOM05D004653 ORTHO05D006221 8.9e-83 312.0 214 63.1
MCO02G367 Micromonas commoda HOM05D004653 ORTHO05D006221 4.3e-77 293.1 242 57.0
Duzib116G0761 Durio zibethinus HOM05D004653 ORTHO05D006221 1.1e-61 241.9 208 63.5
Lalb_Chr23g0270161 Lupinus albus HOM05D004653 ORTHO05D006221 6.6e-54 216.1 144 70.1
CBR_g24313 Chara braunii HOM05D004653 ORTHO05D006221 8.6e-54 215.7 162 61.7
Nitab4.5_0005655g0030 Nicotiana tabacum HOM05D004653 ORTHO05D006221 6.2e-52 209.5 113 85.8
Cc06_g21090 Coffea canephora HOM05D004653 ORTHO05D006221 3.4e-42 177.2 101 85.1
Dinv42645 Davidia involucrata HOM05D004653 ORTHO05D006221 9.9e-42 175.6 157 59.2
Glyma.06G095451 Glycine max HOM05D004653 ORTHO05D006221 1.1e-40 172.2 176 52.3
SEGI_12419 Sequoiadendron giganteum HOM05D004653 ORTHO05D006221 4.8e-36 156.8 91 75.8
Potri.005G159500 Populus trichocarpa HOM05D004653 ORTHO05D006221 9.0e-35 152.5 115 67.0
CSS0010132 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 9.3e-32 142.5 152 52.0
Dinv42644 Davidia involucrata HOM05D004653 ORTHO05D006221 2.2e-17 94.7 115 53.9
PRCOL_00006962 Prasinoderma coloniale HOM05D004653 ORTHO05D006221 1.9e-13 81.6 57 57.9
Gohir.A06G032660 Gossypium hirsutum HOM05D004653 ORTHO05D019566 1.8e-11 75.1 45 84.4
Gorai.010G036500 Gossypium raimondii HOM05D004653 ORTHO05D019566 1.8e-11 75.1 45 84.4
Lalb_Chr23g0270181 Lupinus albus HOM05D004653 ORTHO05D019566 3.1e-11 74.3 58 69.0
BcaB08g35370 Brassica carinata HOM05D004653 ORTHO05D006221 6.9e-11 73.2 57 59.6
CSS0005277 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D019566 1.6e-07 62.0 50 68.0
ATR1171G001 Amborella trichopoda HOM05D004653 ORTHO05D019566 4.6e-07 60.5 83 44.6


User provided reference genes

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