Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G851.40 Capsicum annuum HOM05D001587 ORTHO05D008791 4.1e-204 714.5 365 100.0
Sopen04g034390 Solanum pennellii HOM05D001587 ORTHO05D008791 1.2e-179 633.3 369 88.1
Solyc04g080800.4 Solanum lycopersicum HOM05D001587 ORTHO05D008791 9.4e-177 623.6 369 87.3
PGSC0003DMG400003752 Solanum tuberosum HOM05D001587 ORTHO05D008791 8.0e-176 620.5 370 86.5
Peaxi162Scf00189g00920 Petunia axillaris HOM05D001587 ORTHO05D008791 8.3e-165 583.9 368 82.9
Nitab4.5_0001861g0110 Nicotiana tabacum HOM05D001587 ORTHO05D008791 2.0e-163 579.3 370 83.0
Nitab4.5_0005779g0030 Nicotiana tabacum HOM05D001587 ORTHO05D008791 4.3e-153 545.0 369 78.9
Cc10_g02390 Coffea canephora HOM05D001587 ORTHO05D008791 8.9e-127 457.6 293 77.8
MSTRG.1247 Avicennia marina HOM05D001587 ORTHO05D008791 1.5e-126 456.8 346 69.9
Lj4A33T83 Lonicera japonica HOM05D001587 ORTHO05D008791 4.4e-126 455.3 301 75.1
Migut.C00772 Erythranthe guttata HOM05D001587 ORTHO05D008791 9.9e-126 454.1 367 65.9
Cpa.g.sc99.13 Carica papaya HOM05D001587 ORTHO05D008791 2.9e-125 452.6 340 67.4
GSVIVG01009782001 Vitis vinifera HOM05D001587 ORTHO05D008791 2.9e-125 452.6 321 71.7
TWI56G0852 Tripterygium wilfordii HOM05D001587 ORTHO05D008791 4.9e-125 451.8 368 65.5
Hma1.2p1_1194F.1_g265710 Hydrangea macrophylla HOM05D001587 ORTHO05D008791 6.4e-125 451.4 291 77.0
AUR62034528 Chenopodium quinoa HOM05D001587 ORTHO05D008791 8.4e-125 451.1 334 68.6
CSS0005575 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D008791 1.4e-124 450.3 308 76.6
Thecc.08G034500 Theobroma cacao HOM05D001587 ORTHO05D008791 1.9e-124 449.9 324 71.3
Duzib041G0293 Durio zibethinus HOM05D001587 ORTHO05D008791 5.4e-124 448.4 324 71.0
Atru.chr13.396 Acer truncatum HOM05D001587 ORTHO05D008791 7.1e-124 448.0 292 76.0
CSS0021558 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D008791 9.3e-124 447.6 352 69.6
RcHm_v2.0_Chr6g0301771 Rosa chinensis HOM05D001587 ORTHO05D008791 2.1e-123 446.4 333 70.0
Gorai.010G007600 Gossypium raimondii HOM05D001587 ORTHO05D008791 4.6e-123 445.3 324 71.6
Manes.05G154300 Manihot esculenta HOM05D001587 ORTHO05D008791 1.0e-122 444.1 325 71.4
QL02p010191 Quercus lobata HOM05D001587 ORTHO05D008791 1.0e-122 444.1 317 72.6
Gohir.D06G002700 Gossypium hirsutum HOM05D001587 ORTHO05D008791 1.3e-122 443.7 324 71.6
Ciclev10001571m.g Citrus clementina HOM05D001587 ORTHO05D008791 1.7e-122 443.4 368 65.2
CANSAT35G0963 Cannabis sativa HOM05D001587 ORTHO05D008791 2.3e-122 443.0 292 74.7
EL10Ac1g00602 Beta vulgaris HOM05D001587 ORTHO05D008791 5.1e-122 441.8 339 67.0
Hund17199 Selenicereus undatus HOM05D001587 ORTHO05D008791 5.1e-122 441.8 344 68.0
COL.COLO4_26234 Corchorus olitorius HOM05D001587 ORTHO05D008791 6.6e-122 441.4 324 70.7
Potri.005G232200 Populus trichocarpa HOM05D001587 ORTHO05D008791 8.7e-122 441.0 306 72.5
Prupe.1G373400 Prunus persica HOM05D001587 ORTHO05D008791 1.9e-121 439.9 289 75.8
MD15G1021600 Malus domestica HOM05D001587 ORTHO05D008791 2.5e-121 439.5 291 74.2
Sabra05G0179100 Salix brachista HOM05D001587 ORTHO05D002654 5.6e-121 438.3 289 75.4
Sed0025916 Sechium edule HOM05D001587 ORTHO05D008791 5.6e-121 438.3 347 67.1
HanXRQChr04g0099151 Helianthus annuus HOM05D001587 ORTHO05D008791 9.6e-121 437.6 321 70.4
Ah.05g180890 Amaranthus hybridus HOM05D001587 ORTHO05D008791 3.6e-120 435.6 289 73.0
FvH4_2g39240 Fragaria vesca HOM05D001587 ORTHO05D008791 3.6e-120 435.6 315 70.5
Lsat_1_v5_gn_1_17201 Lactuca sativa HOM05D001587 ORTHO05D008791 4.8e-120 435.3 322 69.6
Eucgr.F01602 Eucalyptus grandis HOM05D001587 ORTHO05D008791 6.2e-120 434.9 338 67.8
Sc15g0007180 Simmondsia chinensis HOM05D001587 ORTHO05D008791 6.2e-120 434.9 291 73.9
TPR.G12317 Trifolium pratense HOM05D001587 ORTHO05D008791 1.1e-119 434.1 341 67.4
Lalb_Chr08g0245991 Lupinus albus HOM05D001587 ORTHO05D008791 1.5e-118 430.3 334 66.5
MBI11_g07616_MAGBIO Magnolia biondii HOM05D001587 ORTHO05D008791 1.5e-118 430.3 291 72.5
Nn5g29720 Nelumbo nucifera HOM05D001587 ORTHO05D008791 2.0e-118 429.9 338 67.2
ECA247G3480 Erigeron canadensis HOM05D001587 ORTHO05D008791 2.6e-118 429.5 327 68.2
CsaV3_2G029060 Cucumis sativus L. HOM05D001587 ORTHO05D008791 5.8e-118 428.3 292 73.3
Glyma.06G029000 Glycine max HOM05D001587 ORTHO05D008791 5.8e-118 428.3 296 72.6
Aqoxy6G01203 Aquilegia oxysepala HOM05D001587 ORTHO05D008791 7.6e-118 427.9 367 63.2
Lj1g0011689 Lotus japonicus HOM05D001587 ORTHO05D008791 2.2e-117 426.4 338 65.1
AT1G45110 Arabidopsis thaliana HOM05D001587 ORTHO05D008791 3.8e-117 425.6 292 72.6
MELO3C010971.2 Cucumis melo HOM05D001587 ORTHO05D008791 3.8e-117 425.6 291 72.9
AL1G52680 Arabidopsis lyrata HOM05D001587 ORTHO05D008791 4.9e-117 425.2 292 71.6
BcaC08g42893 Brassica carinata HOM05D001587 ORTHO05D008791 1.9e-116 423.3 292 71.6
C06p01170 Brassica napus HOM05D001587 ORTHO05D008791 1.9e-116 423.3 292 71.6
BolC6t35253H Brassica oleracea HOM05D001587 ORTHO05D008791 1.9e-116 423.3 292 71.6
Phvul.009G060300 Phaseolus vulgaris HOM05D001587 ORTHO05D008791 2.4e-116 422.9 296 71.3
BcaB07g33894 Brassica carinata HOM05D001587 ORTHO05D008791 3.2e-116 422.5 292 70.5
THA.LOC104813319 Tarenaya hassleriana HOM05D001587 ORTHO05D008791 3.2e-116 422.5 309 69.6
A10p07100 Brassica napus HOM05D001587 ORTHO05D008791 4.2e-116 422.2 292 71.2
BraA10t42958Z Brassica rapa HOM05D001587 ORTHO05D008791 4.2e-116 422.2 292 71.2
PSO541G2666 Papaver somniferum HOM05D001587 ORTHO05D008791 4.2e-116 422.2 356 62.6
Sp1g33880 Schrenkiella parvula HOM05D001587 ORTHO05D008791 5.4e-116 421.8 290 71.7
Carub.0001s3551 Capsella rubella HOM05D001587 ORTHO05D008791 7.1e-116 421.4 292 70.9
PSO675G8960 Papaver somniferum HOM05D001587 ORTHO05D008791 1.2e-115 420.6 339 65.5
FAN27G1828 Fragaria x ananassa HOM05D001587 ORTHO05D008791 2.1e-115 419.9 335 66.0
Thhalv10011622m.g Eutrema salsugineum HOM05D001587 ORTHO05D008791 2.7e-115 419.5 291 71.8
Rhsim07G0243600 Rhododendron simsii HOM05D001587 ORTHO05D008791 2.7e-115 419.5 322 69.9
CDE04G1582 Ceratophyllum demersum HOM05D001587 ORTHO05D008791 7.9e-115 417.9 291 70.4
unitig_578.g16081 Utricularia gibba HOM05D001587 ORTHO05D008791 1.3e-114 417.2 368 65.5
CARHR036210 Cardamine hirsuta HOM05D001587 ORTHO05D008791 6.6e-114 414.8 325 65.2
FAN15G0115 Fragaria x ananassa HOM05D001587 ORTHO05D008791 5.6e-113 411.8 322 66.8
Aa31sc185G120 Aethionema arabicum HOM05D001587 ORTHO05D008791 1.4e-111 407.1 395 57.7
Medtr3g112310 Medicago truncatula HOM05D001587 ORTHO05D008791 1.5e-110 403.7 314 67.2
CiPaw.07G156300 Carya illinoinensis HOM05D001587 ORTHO05D008791 3.8e-109 399.1 265 76.2
Os10g0414500 Oryza sativa ssp. japonica HOM05D001587 ORTHO05D008791 1.9e-108 396.7 285 68.8
Zm00001eb048090 Zea mays HOM05D001587 ORTHO05D008791 1.2e-107 394.0 321 63.9
VMungo1309G0203 Vigna mungo HOM05D001587 ORTHO05D008791 1.6e-107 393.7 266 73.3
FAN20G2929 Fragaria x ananassa HOM05D001587 ORTHO05D008791 2.7e-107 392.9 309 67.6
Gohir.A06G007600 Gossypium hirsutum HOM05D001587 ORTHO05D008791 1.5e-105 387.1 275 71.6
HPP92_024861 Vanilla planifolia HOM05D001587 ORTHO05D008791 1.9e-105 386.7 322 62.1
arahy.Tifrunner.gnm1.ann1.R2LLHR Arachis hypogaea HOM05D001587 ORTHO05D008791 5.3e-103 378.6 492 45.9
arahy.Tifrunner.gnm1.ann1.F22IQH Arachis hypogaea HOM05D001587 ORTHO05D008791 9.3e-100 367.9 503 44.3
vmacro04308 Vaccinium macrocarpon HOM05D001587 ORTHO05D008791 3.5e-99 365.9 575 41.6
ATR0665G135 Amborella trichopoda HOM05D001587 ORTHO05D008791 2.3e-98 363.2 262 68.7
TAR628G1547 Trochodendron aralioides HOM05D001587 ORTHO05D008791 1.1e-95 354.4 361 56.2
Haze_22561 Corylus avellana HOM05D001587 ORTHO05D008791 3.1e-95 352.8 384 53.1
ClCG08G014710 Citrullus lanatus HOM05D001587 ORTHO05D008791 2.9e-93 346.3 321 58.9
SGA_v2.0_scaffold11G05847 Striga asiatica HOM05D001587 ORTHO05D008791 3.2e-92 342.8 261 68.2
SalBow7G1285 Salvia bowleyana HOM05D001587 ORTHO05D008791 4.2e-92 342.4 274 66.4
Dinv39461 Davidia involucrata HOM05D001587 ORTHO05D008791 2.7e-91 339.7 279 64.9
AUR62014470 Chenopodium quinoa HOM05D001587 ORTHO05D008791 6.7e-90 335.1 232 69.8
Actinidia15364 Actinidia chinensis HOM05D001587 ORTHO05D002654 1.5e-89 334.0 229 74.7
Mapoly0042s0010 Marchantia polymorpha HOM05D001587 ORTHO05D008791 3.3e-89 332.8 275 59.6
Psat0s471g0160 Pisum sativum HOM05D001587 ORTHO05D008791 6.3e-88 328.6 233 70.0
Ca_15490_v3 Cicer arietinum L. HOM05D001587 ORTHO05D008791 1.4e-87 327.4 287 59.9
Pp3c23_9730 Physcomitrium patens HOM05D001587 ORTHO05D008791 1.2e-83 314.3 285 55.1
SMO169G0295 Selaginella moellendorffii HOM05D001587 ORTHO05D008791 1.2e-83 314.3 290 54.1
AagrBONN_evm.TU.Sc2ySwM_344.3744 Anthoceros agrestis HOM05D001587 ORTHO05D008791 8.8e-82 308.1 285 54.7
vmacro07875 Vaccinium macrocarpon HOM05D001587 ORTHO05D008791 8.2e-80 301.6 184 79.3
MD08G1024000 Malus domestica HOM05D001587 ORTHO05D008791 9.4e-76 288.1 321 53.6
Ca_29810_v3 Cicer arietinum L. HOM05D001587 ORTHO05D008791 4.2e-60 236.1 179 68.7
AagrBONN_evm.TU.Sc2ySwM_344.3737 Anthoceros agrestis HOM05D001587 ORTHO05D008791 8.8e-58 228.4 206 56.3
Glyma.04G029000 Glycine max HOM05D001587 ORTHO05D008791 2.4e-55 220.3 142 74.6
Psat3g187600 Pisum sativum HOM05D001587 ORTHO05D008791 1.7e-53 214.2 170 63.5
Cre13.g572000 Chlamydomonas reinhardtii HOM05D001587 ORTHO05D008791 6.5e-53 212.2 321 39.9
Dinv31791 Davidia involucrata HOM05D001587 ORTHO05D002654 4.2e-52 209.5 213 56.3
MCO14G527 Micromonas commoda HOM05D001587 ORTHO05D008791 2.6e-49 200.3 193 52.8
PRCOL_00005810 Prasinoderma coloniale HOM05D001587 ORTHO05D008791 2.2e-48 197.2 299 39.5
Manes.18G021412 Manihot esculenta HOM05D001587 ORTHO05D008791 9.2e-47 191.8 234 48.7
Psat3g187640 Pisum sativum HOM05D001587 ORTHO05D008791 9.5e-44 181.8 199 53.8
Psat5g097560 Pisum sativum HOM05D000922 ORTHO05D008791 8.9e-34 148.7 216 42.1
Hma1.2p1_1194F.1_g265720 Hydrangea macrophylla HOM05D001587 ORTHO05D014867 1.3e-29 134.8 98 70.4
Psat5g097640 Pisum sativum HOM05D000922 ORTHO05D001851 2.3e-29 134.0 169 45.0
AL1G52690 Arabidopsis lyrata HOM05D001587 ORTHO05D014867 1.1e-28 131.7 105 61.9
SEGI_08976 Sequoiadendron giganteum HOM05D001587 ORTHO05D008791 4.4e-25 119.8 109 58.7
SEGI_23158 Sequoiadendron giganteum HOM05D001587 ORTHO05D008791 9.8e-25 118.6 107 58.9
CARHR174630 Cardamine hirsuta HOM05D001587 ORTHO05D014867 9.2e-23 112.1 91 62.6
Ca_02074_v3 Cicer arietinum L. HOM05D001587 ORTHO05D008791 3.0e-21 107.1 99 59.6
CARHR293210 Cardamine hirsuta HOM05D001587 ORTHO05D008791 6.8e-18 95.9 64 75.0
SEGI_08644 Sequoiadendron giganteum HOM05D001587 ORTHO05D014867 8.4e-16 89.0 77 55.8
COL.COLO4_00685 Corchorus olitorius HOM05D030008 ORTHO05D034598 7.8e-14 82.4 153 34.0
CSS0001111 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 2.3e-13 80.9 57 73.7
CSS0020626 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 2.3e-13 80.9 57 73.7
CSS0029664 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 2.3e-13 80.9 57 73.7
CSS0031048 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 2.3e-13 80.9 57 73.7
CSS0048350 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 2.3e-13 80.9 57 73.7
CSS0002416 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 3.0e-13 80.5 75 61.3
CSS0016398 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 3.0e-13 80.5 57 73.7
CSS0046073 Camellia sinensis var. sinensis HOM05D001587 ORTHO05D014867 3.0e-13 80.5 57 73.7
Psat4g126360 Pisum sativum HOM05D001587 ORTHO05D037360 5.1e-13 79.7 55 67.3
Potri.002G030701 Populus trichocarpa HOM05D001587 ORTHO05D014867 4.3e-12 76.6 132 37.9
Sabra02G0024500 Salix brachista HOM05D001587 ORTHO05D037360 4.6e-06 56.6 38 68.4


User provided reference genes

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