Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G822.1 Capsicum annuum HOM05D000527 ORTHO05D018839 2.6e-71 271.9 136 100.0
Nitab4.5_0002008g0050 Nicotiana tabacum HOM05D000527 ORTHO05D000559 4.6e-36 154.8 137 62.0
Solyc07g007930.3 Solanum lycopersicum HOM05D000527 ORTHO05D000559 1.0e-35 153.7 137 62.0
Sopen07g003810 Solanum pennellii HOM05D000527 ORTHO05D000559 1.0e-35 153.7 137 62.0
CAN.G809.83 Capsicum annuum HOM05D000527 ORTHO05D000559 1.3e-35 153.3 137 62.0
PGSC0003DMG400030891 Solanum tuberosum HOM05D000527 ORTHO05D000559 1.3e-35 153.3 137 61.3
Nitab4.5_0009377g0040 Nicotiana tabacum HOM05D000527 ORTHO05D000559 5.1e-35 151.4 136 61.0
Nitab4.5_0005465g0030 Nicotiana tabacum HOM05D000527 ORTHO05D000559 4.3e-34 148.3 137 60.6
Peaxi162Scf00088g01328 Petunia axillaris HOM05D000527 ORTHO05D000559 6.2e-33 144.4 137 58.4
Cc06_g08070 Coffea canephora HOM05D000527 ORTHO05D000559 3.1e-24 115.5 137 46.0
CAN.G1662.2 Capsicum annuum HOM05D000527 ORTHO05D018839 1.5e-23 113.2 58 94.8
Dinv36479 Davidia involucrata HOM05D000527 ORTHO05D000559 1.5e-23 113.2 137 45.3
CSS0014911 Camellia sinensis var. sinensis HOM05D000527 ORTHO05D018839 5.9e-23 111.3 137 46.7
Hma1.2p1_0497F.1_g166370 Hydrangea macrophylla HOM05D000527 ORTHO05D000559 5.9e-23 111.3 137 45.3
Rhsim01G0061700 Rhododendron simsii HOM05D000527 ORTHO05D000559 7.6e-23 110.9 137 47.4
SalBow1G6103 Salvia bowleyana HOM05D000527 ORTHO05D000559 4.2e-21 105.1 137 45.3
Actinidia40499 Actinidia chinensis HOM05D000527 ORTHO05D000559 1.6e-20 103.2 137 44.5
vmacro07720 Vaccinium macrocarpon HOM05D000527 ORTHO05D000559 4.6e-20 101.7 137 43.8
Cfa003422 Carpinus fangiana HOM05D000527 ORTHO05D000559 7.9e-20 100.9 137 40.1
Haze_25510 Corylus avellana HOM05D000527 ORTHO05D000559 1.8e-19 99.8 137 40.1
Manes.01G175500 Manihot esculenta HOM05D000527 ORTHO05D000559 3.0e-19 99.0 137 40.1
Potri.018G126400 Populus trichocarpa HOM05D000527 ORTHO05D000559 8.8e-19 97.4 137 39.4
TAR383G0644 Trochodendron aralioides HOM05D000527 ORTHO05D000559 1.1e-18 97.1 137 41.6
TAR625G0943 Trochodendron aralioides HOM05D000527 ORTHO05D000559 1.1e-18 97.1 137 40.9
CiPaw.03G248400 Carya illinoinensis HOM05D000527 ORTHO05D000559 3.3e-18 95.5 137 38.7
Sabra06G0047900 Salix brachista HOM05D000527 ORTHO05D000559 7.4e-18 94.4 137 40.1
COL.COLO4_35153 Corchorus olitorius HOM05D000527 ORTHO05D000559 1.7e-17 93.2 137 40.1
Nn2g12118 Nelumbo nucifera HOM05D000527 ORTHO05D000559 8.2e-17 90.9 136 39.7
Oeu000513.1 Olea europaea HOM05D000527 ORTHO05D000559 1.1e-16 90.5 137 43.1
CsaV3_1G026710 Cucumis sativus L. HOM05D000527 ORTHO05D000559 1.4e-16 90.1 137 39.4
Potri.006G065700 Populus trichocarpa HOM05D000527 ORTHO05D000559 1.4e-16 90.1 137 39.4
Duzib168G2387 Durio zibethinus HOM05D000527 ORTHO05D000559 2.4e-16 89.4 137 38.7
Eucgr.C04266 Eucalyptus grandis HOM05D000527 ORTHO05D000559 2.4e-16 89.4 137 37.2
Duzib150G0955 Durio zibethinus HOM05D000527 ORTHO05D000559 3.1e-16 89.0 137 38.0
Lj7A433T53 Lonicera japonica HOM05D000527 ORTHO05D000559 5.3e-16 88.2 133 39.1
Oeu055965.1 Olea europaea HOM05D000527 ORTHO05D000559 9.1e-16 87.4 137 41.6
Thecc.09G132000 Theobroma cacao HOM05D000527 ORTHO05D000559 9.1e-16 87.4 137 37.2
PGR142G1648 Punica granatum HOM05D000527 ORTHO05D000559 2.6e-15 85.9 137 39.4
MBI17_g21976_MAGBIO Magnolia biondii HOM05D000527 ORTHO05D000559 7.7e-15 84.3 137 36.5
PGR102G0131 Punica granatum HOM05D000527 ORTHO05D000559 1.0e-14 84.0 137 37.2
Oeu032453.1 Olea europaea HOM05D000527 ORTHO05D000559 1.7e-14 83.2 95 46.3
ClCG06G011490 Citrullus lanatus HOM05D000527 ORTHO05D000559 6.5e-14 81.3 137 35.8
MBI15_g13305_MAGBIO Magnolia biondii HOM05D000527 ORTHO05D000559 8.5e-14 80.9 137 35.8
Atru.chr7.1949 Acer truncatum HOM05D000527 ORTHO05D000559 1.4e-13 80.1 133 35.3
CDE06G2805 Ceratophyllum demersum HOM05D000527 ORTHO05D000559 1.4e-13 80.1 137 35.0
Gohir.D08G099600 Gossypium hirsutum HOM05D000527 ORTHO05D000559 3.2e-13 79.0 137 37.2
Ciclev10007519m.g Citrus clementina HOM05D000527 ORTHO05D000559 4.2e-13 78.6 135 35.6
MBI11_g11858_MAGBIO Magnolia biondii HOM05D000527 ORTHO05D000559 7.2e-13 77.8 137 35.0
Gorai.004G107400 Gossypium raimondii HOM05D000527 ORTHO05D000559 1.6e-12 76.6 137 36.5
Gohir.A08G088562 Gossypium hirsutum HOM05D000527 ORTHO05D000559 6.1e-12 74.7 137 37.2
Oeu038256.1 Olea europaea HOM05D000527 ORTHO05D000559 1.4e-11 73.6 95 44.2
Oeu052178.1 Olea europaea HOM05D000527 ORTHO05D000559 3.0e-11 72.4 92 44.6
CANSAT11G1409 Cannabis sativa HOM05D000527 ORTHO05D000559 5.1e-11 71.6 133 33.1
MD02G1025600 Malus domestica HOM05D000527 ORTHO05D018839 1.5e-10 70.1 98 39.8
DCAR_020886 Daucus carota HOM05D000527 ORTHO05D000559 2.0e-10 69.7 137 35.8
DCAR_020888 Daucus carota HOM05D000527 ORTHO05D000559 2.0e-10 69.7 137 35.8
GSVIVG01015589001 Vitis vinifera HOM05D000527 ORTHO05D000559 2.6e-10 69.3 106 37.7
unitig_748.g7165 Utricularia gibba HOM05D000527 ORTHO05D000559 3.3e-10 68.9 91 41.8
MD02G1026300 Malus domestica HOM05D000527 ORTHO05D000559 4.4e-10 68.6 98 37.8
QL02p089845 Quercus lobata HOM05D000527 ORTHO05D000559 4.4e-10 68.6 114 35.1
Cpa.g.sc46.40 Carica papaya HOM05D000527 ORTHO05D000559 7.4e-10 67.8 136 36.0
Manes.06G047200 Manihot esculenta HOM05D000527 ORTHO05D000559 1.3e-09 67.0 137 33.6
SGA_v2.0_scaffold109G31072 Striga asiatica HOM05D000527 ORTHO05D000559 1.3e-09 67.0 92 39.1
Sc08g0006320 Simmondsia chinensis HOM05D000527 ORTHO05D018839 1.7e-09 66.6 90 40.0
EL10Ac8g18719 Beta vulgaris HOM05D000527 ORTHO05D000559 4.8e-09 65.1 133 31.6
unitig_0.g2719 Utricularia gibba HOM05D000527 ORTHO05D000559 4.8e-09 65.1 92 38.0
Sc08g0006290 Simmondsia chinensis HOM05D000527 ORTHO05D000559 6.3e-09 64.7 114 35.1
arahy.Tifrunner.gnm1.ann1.UR837P Arachis hypogaea HOM05D000527 ORTHO05D000559 1.1e-08 63.9 90 38.9
AUR62011175 Chenopodium quinoa HOM05D000527 ORTHO05D000559 1.8e-08 63.2 137 32.1
arahy.Tifrunner.gnm1.ann1.SM3TC1 Arachis hypogaea HOM05D000527 ORTHO05D000559 2.4e-08 62.8 90 37.8
Migut.J01217 Erythranthe guttata HOM05D000527 ORTHO05D000559 3.1e-08 62.4 53 52.8
AL6G31800 Arabidopsis lyrata HOM05D000527 ORTHO05D000559 5.3e-08 61.6 98 30.6
Phvul.003G168800 Phaseolus vulgaris HOM05D000527 ORTHO05D000559 7.0e-08 61.2 70 41.4
Sed0021184 Sechium edule HOM05D000527 ORTHO05D000559 1.5e-07 60.1 98 33.7
Sp6g24160 Schrenkiella parvula HOM05D000527 ORTHO05D000559 2.0e-07 59.7 53 45.3
A02p06130 Brassica napus HOM05D000527 ORTHO05D000559 2.6e-07 59.3 53 43.4
AUR62013309 Chenopodium quinoa HOM05D000527 ORTHO05D000559 2.6e-07 59.3 92 37.0
AT5G20250 Arabidopsis thaliana HOM05D000527 ORTHO05D000559 3.4e-07 58.9 53 45.3
VMungo1215G1211 Vigna mungo HOM05D000527 ORTHO05D000559 3.4e-07 58.9 51 45.1
Os06g0172800 Oryza sativa ssp. japonica HOM05D000527 ORTHO05D000559 4.5e-07 58.5 106 31.1
HPP92_017083 Vanilla planifolia HOM05D000527 ORTHO05D000559 4.5e-07 58.5 137 30.7
Zm00001eb281720 Zea mays HOM05D000527 ORTHO05D000559 4.5e-07 58.5 95 36.8
Aa31LG1G14360 Aethionema arabicum HOM05D000527 ORTHO05D000559 5.9e-07 58.2 99 35.4
BcaC03g13746 Brassica carinata HOM05D000527 ORTHO05D000559 5.9e-07 58.2 53 43.4
Lj4g0004012 Lotus japonicus HOM05D000527 ORTHO05D000559 5.9e-07 58.2 53 43.4
Prupe.7G248600 Prunus persica HOM05D000527 ORTHO05D000559 5.9e-07 58.2 55 49.1
THA.LOC104811023 Tarenaya hassleriana HOM05D000527 ORTHO05D000559 5.9e-07 58.2 53 45.3
A10p19690 Brassica napus HOM05D000527 ORTHO05D000559 7.7e-07 57.8 53 43.4
BraA10t44044Z Brassica rapa HOM05D000527 ORTHO05D000559 7.7e-07 57.8 53 43.4
Carub.0006s1864 Capsella rubella HOM05D000527 ORTHO05D000559 7.7e-07 57.8 53 45.3
FAN23G1523 Fragaria x ananassa HOM05D000527 ORTHO05D000559 7.7e-07 57.8 88 36.4
FAN28G0293 Fragaria x ananassa HOM05D000527 ORTHO05D000559 7.7e-07 57.8 88 36.4
Hund26537 Selenicereus undatus HOM05D000527 ORTHO05D000559 1.3e-06 57.0 137 29.2
ATR0800G044 Amborella trichopoda HOM05D000527 ORTHO05D000559 1.7e-06 56.6 137 32.1
BolC2t07030H Brassica oleracea HOM05D000527 ORTHO05D000559 1.7e-06 56.6 53 41.5
BraA02t05563Z Brassica rapa HOM05D000527 ORTHO05D000559 1.7e-06 56.6 53 43.4
Glyma.17G111400 Glycine max HOM05D000527 ORTHO05D000559 1.7e-06 56.6 97 32.0
RcHm_v2.0_Chr2g0087631 Rosa chinensis HOM05D000527 ORTHO05D000559 1.7e-06 56.6 88 36.4
TWI34G1769 Tripterygium wilfordii HOM05D000527 ORTHO05D000559 1.7e-06 56.6 94 37.2
BcaB05g22856 Brassica carinata HOM05D000527 ORTHO05D000559 2.2e-06 56.2 53 41.5
BcaB08g36537 Brassica carinata HOM05D000527 ORTHO05D000559 2.2e-06 56.2 54 40.7
BcaC04g19415 Brassica carinata HOM05D000527 ORTHO05D000559 2.2e-06 56.2 53 43.4
C09p55950 Brassica napus HOM05D000527 ORTHO05D000559 2.2e-06 56.2 53 43.4
BolC9t58464H Brassica oleracea HOM05D000527 ORTHO05D000559 2.2e-06 56.2 53 43.4
CARHR192580 Cardamine hirsuta HOM05D000527 ORTHO05D000559 2.9e-06 55.8 52 46.2
Glyma.13G160100 Glycine max HOM05D000527 ORTHO05D000559 2.9e-06 55.8 53 49.1
ECA234G1088 Erigeron canadensis HOM05D000527 ORTHO05D000559 3.8e-06 55.5 100 33.0
Migut.K00425 Erythranthe guttata HOM05D000527 ORTHO05D000559 3.8e-06 55.5 53 49.1
PSO170G6092 Papaver somniferum HOM05D000527 ORTHO05D000559 5.0e-06 55.1 56 41.1
AUR62024430 Chenopodium quinoa HOM05D000527 ORTHO05D000559 6.5e-06 54.7 137 31.4
Lsat_1_v5_gn_5_92921 Lactuca sativa HOM05D000527 ORTHO05D000559 6.5e-06 54.7 87 39.1
Hund09283 Selenicereus undatus HOM05D000527 ORTHO05D000559 6.5e-06 54.7 70 40.0
FvH4_1g02620 Fragaria vesca HOM05D000527 ORTHO05D000559 8.5e-06 54.3 88 35.2
FAN19G3096 Fragaria x ananassa HOM05D000527 ORTHO05D000559 8.5e-06 54.3 88 35.2
HanXRQChr10g0315851 Helianthus annuus HOM05D000527 ORTHO05D000559 8.5e-06 54.3 88 37.5
SEGI_19248 Sequoiadendron giganteum HOM05D000527 ORTHO05D000559 8.5e-06 54.3 133 32.3
TPR.G15457 Trifolium pratense HOM05D000527 ORTHO05D019461 8.5e-06 54.3 133 27.8


User provided reference genes

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