Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G8162.1 Capsicum annuum HOM05D002496 ORTHO05D002787 3.9e-88 328.2 173 100.0
CAN.G1783.6 Capsicum annuum HOM05D002496 ORTHO05D002787 7.9e-57 224.2 147 86.4
Solyc12g100360.1 Solanum lycopersicum HOM05D002496 ORTHO05D002787 7.9e-57 224.2 147 86.4
Sopen12g035030 Solanum pennellii HOM05D002496 ORTHO05D002787 7.9e-57 224.2 147 86.4
Peaxi162Scf00738g00312 Petunia axillaris HOM05D002496 ORTHO05D002787 1.3e-56 223.4 147 85.7
Dinv13473 Davidia involucrata HOM05D002496 ORTHO05D002787 1.8e-56 223.0 147 85.0
Nitab4.5_0000827g0130 Nicotiana tabacum HOM05D002496 ORTHO05D002787 3.0e-56 222.2 147 85.7
CAN.G792.4 Capsicum annuum HOM05D002496 ORTHO05D002787 6.7e-56 221.1 147 85.7
Ciclev10014012m.g Citrus clementina HOM05D002496 ORTHO05D002787 8.7e-56 220.7 147 83.7
Actinidia39346 Actinidia chinensis HOM05D002496 ORTHO05D002787 2.5e-55 219.2 147 83.0
Cfa009562 Carpinus fangiana HOM05D002496 ORTHO05D002787 2.5e-55 219.2 147 83.0
COL.COLO4_05794 Corchorus olitorius HOM05D002496 ORTHO05D002787 4.3e-55 218.4 147 83.0
Dinv11477 Davidia involucrata HOM05D002496 ORTHO05D002787 4.3e-55 218.4 147 83.0
GSVIVG01025470001 Vitis vinifera HOM05D002496 ORTHO05D002787 4.3e-55 218.4 147 83.0
Atru.chr3.2106 Acer truncatum HOM05D002496 ORTHO05D002787 7.4e-55 217.6 147 82.3
HanXRQChr13g0405751 Helianthus annuus HOM05D002496 ORTHO05D002787 7.4e-55 217.6 147 81.6
Haze_22941 Corylus avellana HOM05D002496 ORTHO05D002787 9.6e-55 217.2 147 82.3
Glyma.08G125500 Glycine max HOM05D002496 ORTHO05D002787 1.3e-54 216.9 147 81.6
Oeu023952.2 Olea europaea HOM05D002496 ORTHO05D002787 1.3e-54 216.9 149 81.2
Phvul.002G247600 Phaseolus vulgaris HOM05D002496 ORTHO05D002787 1.3e-54 216.9 147 81.6
Rhsim01G0184300 Rhododendron simsii HOM05D002496 ORTHO05D002787 1.3e-54 216.9 147 81.6
VMungo0251G1507 Vigna mungo HOM05D002496 ORTHO05D002787 1.3e-54 216.9 147 81.6
DCAR_029934 Daucus carota HOM05D002496 ORTHO05D002787 1.6e-54 216.5 147 81.6
ECA233G0145 Erigeron canadensis HOM05D002496 ORTHO05D002787 1.6e-54 216.5 147 81.0
Lalb_Chr13g0295581 Lupinus albus HOM05D002496 ORTHO05D002787 1.6e-54 216.5 147 82.3
Sabra03G0164600 Salix brachista HOM05D002496 ORTHO05D002787 1.6e-54 216.5 147 82.3
Thecc.09G199700 Theobroma cacao HOM05D002496 ORTHO05D002787 1.6e-54 216.5 147 82.3
Duzib168G0200 Durio zibethinus HOM05D002496 ORTHO05D002787 2.1e-54 216.1 147 82.3
QL01p003675 Quercus lobata HOM05D002496 ORTHO05D002787 2.1e-54 216.1 147 81.6
Cpa.g.sc119.40 Carica papaya HOM05D002496 ORTHO05D002787 2.8e-54 215.7 147 82.3
CiPaw.13G177100 Carya illinoinensis HOM05D002496 ORTHO05D002787 2.8e-54 215.7 147 81.0
CsaV3_1G041650 Cucumis sativus L. HOM05D002496 ORTHO05D002787 2.8e-54 215.7 147 81.6
Gohir.A03G022300 Gossypium hirsutum HOM05D002496 ORTHO05D002787 2.8e-54 215.7 147 81.6
Eucgr.J01766 Eucalyptus grandis HOM05D002496 ORTHO05D002787 3.7e-54 215.3 147 81.6
Glyma.05G167200 Glycine max HOM05D002496 ORTHO05D002787 3.7e-54 215.3 147 81.0
Gohir.D03G146400 Gossypium hirsutum HOM05D002496 ORTHO05D002787 3.7e-54 215.3 147 81.6
Gorai.003G153800 Gossypium raimondii HOM05D002496 ORTHO05D002787 3.7e-54 215.3 147 81.6
Psat7g064160 Pisum sativum HOM05D002496 ORTHO05D002787 3.7e-54 215.3 148 81.1
Potri.003G221100 Populus trichocarpa HOM05D002496 ORTHO05D002787 3.7e-54 215.3 147 81.6
ClCG03G014540 Citrullus lanatus HOM05D002496 ORTHO05D002787 4.8e-54 214.9 149 81.2
Ca_17842_v3 Cicer arietinum L. HOM05D002496 ORTHO05D002787 6.2e-54 214.5 147 81.6
Migut.D02566 Erythranthe guttata HOM05D002496 ORTHO05D002787 8.2e-54 214.2 147 81.0
Migut.D02589 Erythranthe guttata HOM05D002496 ORTHO05D002787 8.2e-54 214.2 147 81.0
Manes.03G087600 Manihot esculenta HOM05D002496 ORTHO05D002787 8.2e-54 214.2 147 81.0
Sed0000966 Sechium edule HOM05D002496 ORTHO05D002787 8.2e-54 214.2 147 81.0
MELO3C015577.2 Cucumis melo HOM05D002496 ORTHO05D002787 1.1e-53 213.8 147 81.0
Potri.001G003900 Populus trichocarpa HOM05D002496 ORTHO05D002787 1.1e-53 213.8 147 81.0
Sabra01G0002600 Salix brachista HOM05D002496 ORTHO05D002787 1.1e-53 213.8 147 81.0
Aqoxy1G00475 Aquilegia oxysepala HOM05D002496 ORTHO05D002787 1.8e-53 213.0 147 78.9
HanXRQChr02g0057261 Helianthus annuus HOM05D002496 ORTHO05D002787 1.8e-53 213.0 147 79.6
PSO339G0705 Papaver somniferum HOM05D002496 ORTHO05D002787 1.8e-53 213.0 144 81.2
PSO384G1583 Papaver somniferum HOM05D002496 ORTHO05D002787 1.8e-53 213.0 144 81.2
Oeu023700.1 Olea europaea HOM05D002496 ORTHO05D002787 2.4e-53 212.6 147 81.0
MBI01_g25638_MAGBIO Magnolia biondii HOM05D002496 ORTHO05D002787 3.1e-53 212.2 147 80.3
SalBow2G0058 Salvia bowleyana HOM05D002496 ORTHO05D002787 3.1e-53 212.2 147 80.3
MSTRG.20937 Avicennia marina HOM05D002496 ORTHO05D002787 4.1e-53 211.8 147 79.6
Lj4g0028195 Lotus japonicus HOM05D002496 ORTHO05D002787 5.3e-53 211.5 147 80.3
SGA_v2.0_scaffold3G01729 Striga asiatica HOM05D002496 ORTHO05D002787 5.3e-53 211.5 147 79.6
Nn7g35861 Nelumbo nucifera HOM05D002496 ORTHO05D002787 6.9e-53 211.1 147 79.6
THA.LOC104822681 Tarenaya hassleriana HOM05D002496 ORTHO05D002787 1.2e-52 210.3 147 79.6
Sed0022657 Sechium edule HOM05D002496 ORTHO05D002787 2.0e-52 209.5 147 78.9
Hund21627 Selenicereus undatus HOM05D002496 ORTHO05D002787 2.0e-52 209.5 147 78.2
Sc16g0012220 Simmondsia chinensis HOM05D002496 ORTHO05D002787 2.6e-52 209.1 147 77.6
Cc01_g00070 Coffea canephora HOM05D002496 ORTHO05D002787 3.4e-52 208.8 147 80.3
unitig_899.g15353 Utricularia gibba HOM05D002496 ORTHO05D002787 3.4e-52 208.8 147 79.6
Carub.0001s4386 Capsella rubella HOM05D002496 ORTHO05D002787 5.8e-52 208.0 147 78.9
Medtr8g088520 Medicago truncatula HOM05D002496 ORTHO05D002787 5.8e-52 208.0 147 79.6
MD03G1003600 Malus domestica HOM05D002496 ORTHO05D002787 7.6e-52 207.6 147 78.2
CARHR045010 Cardamine hirsuta HOM05D002496 ORTHO05D002787 1.3e-51 206.8 147 78.2
Thhalv10011175m.g Eutrema salsugineum HOM05D002496 ORTHO05D002787 1.3e-51 206.8 144 79.9
Sp1g41030 Schrenkiella parvula HOM05D002496 ORTHO05D002787 1.3e-51 206.8 144 79.9
EL10Ac4g10386 Beta vulgaris HOM05D002496 ORTHO05D002787 2.2e-51 206.1 147 76.2
AL1G63400 Arabidopsis lyrata HOM05D002496 ORTHO05D002787 2.9e-51 205.7 147 78.2
AT1G55350 Arabidopsis thaliana HOM05D002496 ORTHO05D002787 2.9e-51 205.7 147 78.2
BcaB04g16962 Brassica carinata HOM05D002496 ORTHO05D002787 2.9e-51 205.7 146 78.1
Lsat_1_v5_gn_6_53141 Lactuca sativa HOM05D002496 ORTHO05D002787 3.8e-51 205.3 147 78.2
vmacro12599 Vaccinium macrocarpon HOM05D002496 ORTHO05D002787 8.4e-51 204.1 147 78.2
A06p00230 Brassica napus HOM05D002496 ORTHO05D002787 2.5e-50 202.6 144 77.8
C06p10330 Brassica napus HOM05D002496 ORTHO05D002787 2.5e-50 202.6 144 77.8
BolC6t36109H Brassica oleracea HOM05D002496 ORTHO05D002787 2.5e-50 202.6 144 77.8
BraA06t23239Z Brassica rapa HOM05D002496 ORTHO05D002787 2.5e-50 202.6 144 77.8
AUR62040903 Chenopodium quinoa HOM05D002496 ORTHO05D002787 4.2e-50 201.8 147 75.5
MD11G1003500 Malus domestica HOM05D002496 ORTHO05D002787 5.5e-50 201.4 147 76.9
Os02g0709400 Oryza sativa ssp. japonica HOM05D002496 ORTHO05D002787 5.5e-50 201.4 164 69.5
HPP92_024699 Vanilla planifolia HOM05D002496 ORTHO05D002787 5.5e-50 201.4 147 76.2
Prupe.6G003300 Prunus persica HOM05D002496 ORTHO05D002787 7.1e-50 201.1 147 76.9
PGR119G1355 Punica granatum HOM05D002496 ORTHO05D002787 7.1e-50 201.1 147 77.6
AUR62019163 Chenopodium quinoa HOM05D002496 ORTHO05D002787 9.3e-50 200.7 147 74.8
CANSAT11G2110 Cannabis sativa HOM05D002496 ORTHO05D002787 2.1e-49 199.5 147 76.2
TAR369G0007 Trochodendron aralioides HOM05D002496 ORTHO05D002787 2.7e-49 199.1 148 76.4
arahy.Tifrunner.gnm1.ann1.3G7H7K Arachis hypogaea HOM05D002496 ORTHO05D002787 4.6e-49 198.4 147 75.5
arahy.Tifrunner.gnm1.ann1.P751E4 Arachis hypogaea HOM05D002496 ORTHO05D002787 4.6e-49 198.4 147 75.5
FvH4_3g45741 Fragaria vesca HOM05D002496 ORTHO05D002787 6.1e-49 198.0 147 75.5
FAN25G0679 Fragaria x ananassa HOM05D002496 ORTHO05D002787 6.1e-49 198.0 147 75.5
RcHm_v2.0_Chr5g0083811 Rosa chinensis HOM05D002496 ORTHO05D002787 7.9e-49 197.6 147 75.5
FAN16G0954 Fragaria x ananassa HOM05D002496 ORTHO05D002787 3.9e-48 195.3 147 74.1
Zm00001eb014030 Zea mays HOM05D002496 ORTHO05D002787 6.7e-48 194.5 147 71.4
TAR623G0218 Trochodendron aralioides HOM05D002496 ORTHO05D002787 8.7e-48 194.1 147 74.8
ATR0827G153 Amborella trichopoda HOM05D002496 ORTHO05D002787 3.3e-47 192.2 163 68.7
BcaC08g43619 Brassica carinata HOM05D002496 ORTHO05D002787 1.8e-45 186.4 142 74.6
SEGI_26512 Sequoiadendron giganteum HOM05D002496 ORTHO05D002787 4.5e-44 181.8 147 69.4
Aa31LG10G1150 Aethionema arabicum HOM05D002496 ORTHO05D002787 2.7e-41 172.6 147 68.0
CDE02G0627 Ceratophyllum demersum HOM05D002496 ORTHO05D002787 8.8e-40 167.5 163 62.6
THA.LOC104810325 Tarenaya hassleriana HOM05D002496 ORTHO05D002787 1.2e-36 157.1 147 63.9
TPR.G6803 Trifolium pratense HOM05D002496 ORTHO05D002787 2.6e-36 156.0 147 63.3
CSS0046180 Camellia sinensis var. sinensis HOM05D002496 ORTHO05D002787 7.4e-31 137.9 144 60.4
Sopen12g017720 Solanum pennellii HOM05D000006 ORTHO05D000001 1.5e-28 130.2 83 86.7
AagrBONN_evm.TU.Sc2ySwM_344.939 Anthoceros agrestis HOM05D002496 ORTHO05D002787 4.2e-26 122.1 147 51.0
Actinidia30436 Actinidia chinensis HOM05D002496 ORTHO05D002787 9.4e-26 120.9 125 61.6
SMO332G0020 Selaginella moellendorffii HOM05D002496 ORTHO05D002787 8.0e-25 117.9 147 50.3
SMO334G0130 Selaginella moellendorffii HOM05D002496 ORTHO05D002787 8.0e-25 117.9 147 50.3
CAN.G12707.1 Capsicum annuum HOM05D002496 ORTHO05D002787 3.0e-24 115.9 72 87.5
Lj2A763G36 Lonicera japonica HOM05D002496 ORTHO05D002787 2.0e-23 113.2 73 87.7
Mapoly0026s0090 Marchantia polymorpha HOM05D002496 ORTHO05D002787 4.4e-23 112.1 163 46.0
Mapoly0026s0110 Marchantia polymorpha HOM05D002496 ORTHO05D002787 5.7e-23 111.7 164 47.0
Pp3c17_17550 Physcomitrium patens HOM05D002496 ORTHO05D002787 1.7e-22 110.2 147 47.6
CAN.G2376.2 Capsicum annuum HOM05D002496 ORTHO05D002787 4.8e-22 108.6 89 68.5
CBR_g23682 Chara braunii HOM05D002496 ORTHO05D002787 9.8e-07 57.8 66 47.0
Solyc12g038020.3 Solanum lycopersicum HOM05D003938 ORTHO05D004759 2.2e-06 56.6 40 82.5


User provided reference genes

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