Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G812.44 Capsicum annuum HOM05D006620 ORTHO05D008921 2.6e-272 941.4 461 100.0
Sopen09g034080 Solanum pennellii HOM05D006620 ORTHO05D008921 3.0e-260 901.4 461 95.7
Cc03_g07000 Coffea canephora HOM05D006620 ORTHO05D008921 6.0e-237 823.9 462 86.6
Atru.chr4.1848 Acer truncatum HOM05D006620 ORTHO05D008921 1.7e-236 822.4 453 86.8
Actinidia25091 Actinidia chinensis HOM05D006620 ORTHO05D008921 1.5e-235 819.3 461 84.6
Oeu024839.2 Olea europaea HOM05D006620 ORTHO05D008921 3.3e-235 818.1 461 84.6
CiPaw.02G103900 Carya illinoinensis HOM05D006620 ORTHO05D008921 1.1e-233 813.1 462 85.3
QL06p022330 Quercus lobata HOM05D006620 ORTHO05D008921 1.1e-233 813.1 467 83.5
Cpa.g.sc59.55 Carica papaya HOM05D006620 ORTHO05D008921 3.1e-233 811.6 443 86.9
SalBow2G2385 Salvia bowleyana HOM05D006620 ORTHO05D008921 6.9e-233 810.4 460 84.6
TAR365G0583 Trochodendron aralioides HOM05D006620 ORTHO05D008921 2.6e-232 808.5 462 84.2
GSVIVG01028992001 Vitis vinifera HOM05D006620 ORTHO05D008921 4.4e-232 807.7 453 85.2
VMungo0720G1672 Vigna mungo HOM05D006620 ORTHO05D008921 2.2e-231 805.4 458 84.9
CSS0026751 Camellia sinensis var. sinensis HOM05D006620 ORTHO05D008921 6.4e-231 803.9 459 85.0
Glyma.10G128400 Glycine max HOM05D006620 ORTHO05D008921 6.4e-231 803.9 458 84.3
DCAR_002286 Daucus carota HOM05D006620 ORTHO05D008921 1.4e-230 802.7 488 79.9
Gohir.A10G119800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 1.9e-230 802.4 441 85.3
Thecc.04G218300 Theobroma cacao HOM05D006620 ORTHO05D008921 2.4e-230 802.0 459 82.4
Ciclev10004924m.g Citrus clementina HOM05D006620 ORTHO05D008921 3.2e-230 801.6 456 84.4
Hma1.2p1_1241F.1_g269780 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 4.2e-230 801.2 434 87.6
Gohir.D10G146800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 4.6e-229 797.7 428 87.4
Dinv29777 Davidia involucrata HOM05D006620 ORTHO05D008921 6.0e-229 797.3 461 82.6
Phvul.007G238800 Phaseolus vulgaris HOM05D006620 ORTHO05D008921 6.0e-229 797.3 451 85.1
FAN17G2880 Fragaria x ananassa HOM05D006620 ORTHO05D008921 1.0e-228 796.6 433 87.8
Medtr1g046250 Medicago truncatula HOM05D006620 ORTHO05D008921 2.3e-228 795.4 455 83.5
PGR142G1067 Punica granatum HOM05D006620 ORTHO05D008921 5.1e-228 794.3 429 87.2
CANSAT78G1778 Cannabis sativa HOM05D006620 ORTHO05D008921 6.6e-228 793.9 458 83.6
Lj6g0024353 Lotus japonicus HOM05D006620 ORTHO05D008921 6.6e-228 793.9 460 82.6
Manes.15G048100 Manihot esculenta HOM05D006620 ORTHO05D008921 6.6e-228 793.9 460 83.0
FAN12G0711 Fragaria x ananassa HOM05D006620 ORTHO05D008921 1.5e-227 792.7 434 87.3
Lalb_Chr01g0011271 Lupinus albus HOM05D006620 ORTHO05D008921 2.5e-227 792.0 455 82.4
ClCG05G003790 Citrullus lanatus HOM05D006620 ORTHO05D008921 3.3e-227 791.6 451 83.1
FvH4_4g05310 Fragaria vesca HOM05D006620 ORTHO05D008921 3.3e-227 791.6 429 87.6
MELO3C006358.2 Cucumis melo HOM05D006620 ORTHO05D008921 1.3e-226 789.6 440 84.5
PSO764G0126 Papaver somniferum HOM05D006620 ORTHO05D008921 1.3e-226 789.6 429 86.5
RcHm_v2.0_Chr4g0396281 Rosa chinensis HOM05D006620 ORTHO05D008921 1.6e-226 789.3 431 87.5
Migut.G00599 Erythranthe guttata HOM05D006620 ORTHO05D008921 2.1e-226 788.9 464 81.5
Duzib151G1212 Durio zibethinus HOM05D006620 ORTHO05D008921 3.6e-226 788.1 450 82.7
THA.LOC104801056 Tarenaya hassleriana HOM05D006620 ORTHO05D008921 3.6e-226 788.1 450 82.9
Aqoxy5G00083 Aquilegia oxysepala HOM05D006620 ORTHO05D008921 4.8e-226 787.7 456 81.8
Sed0017900 Sechium edule HOM05D006620 ORTHO05D008921 6.2e-226 787.3 451 82.5
CsaV3_3G011480 Cucumis sativus L. HOM05D006620 ORTHO05D008921 1.1e-225 786.6 451 82.9
Thhalv10007576m.g Eutrema salsugineum HOM05D006620 ORTHO05D008921 1.4e-225 786.2 463 80.8
SGA_v2.0_scaffold57G20185 Striga asiatica HOM05D006620 ORTHO05D008921 1.8e-225 785.8 457 82.1
TWI53G1958 Tripterygium wilfordii HOM05D006620 ORTHO05D008921 2.4e-225 785.4 456 82.7
arahy.Tifrunner.gnm1.ann1.8GH2US Arachis hypogaea HOM05D006620 ORTHO05D008921 4.0e-225 784.6 429 86.2
Sp1g03450 Schrenkiella parvula HOM05D006620 ORTHO05D008921 5.3e-225 784.3 458 81.9
Carub.0001s0385 Capsella rubella HOM05D006620 ORTHO05D008921 6.9e-225 783.9 462 80.7
Nn1g03061 Nelumbo nucifera HOM05D006620 ORTHO05D008921 9.0e-225 783.5 428 86.2
MD13G1227100 Malus domestica HOM05D006620 ORTHO05D008921 1.5e-224 782.7 460 82.6
AT1G04620 Arabidopsis thaliana HOM05D006620 ORTHO05D008921 2.6e-224 781.9 459 81.5
unitig_899.g14858 Utricularia gibba HOM05D006620 ORTHO05D008921 3.4e-224 781.6 483 77.8
Prupe.1G054600 Prunus persica HOM05D006620 ORTHO05D008921 4.5e-224 781.2 435 85.7
AL1G14300 Arabidopsis lyrata HOM05D006620 ORTHO05D008921 9.9e-224 780.0 462 80.7
Peaxi162Scf00125g00710 Petunia axillaris HOM05D006620 ORTHO05D008921 9.9e-224 780.0 401 94.0
BraA10t42578Z Brassica rapa HOM05D006620 ORTHO05D008921 1.3e-223 779.6 451 82.0
TPR.G24008 Trifolium pratense HOM05D006620 ORTHO05D008921 1.3e-223 779.6 456 82.5
arahy.Tifrunner.gnm1.ann1.68MQ8I Arachis hypogaea HOM05D006620 ORTHO05D008921 2.9e-223 778.5 479 79.5
FAN07G1877 Fragaria x ananassa HOM05D006620 ORTHO05D008921 4.9e-223 777.7 427 87.1
BolC5t29064H Brassica oleracea HOM05D006620 ORTHO05D008921 6.4e-223 777.3 465 79.8
CARHR003970 Cardamine hirsuta HOM05D006620 ORTHO05D008921 6.4e-223 777.3 462 80.5
Gorai.011G164100 Gossypium raimondii HOM05D006620 ORTHO05D008921 1.1e-222 776.5 457 81.0
SpUn0217_0010 Schrenkiella parvula HOM05D006620 ORTHO05D008921 1.1e-222 776.5 451 82.0
A10p03050 Brassica napus HOM05D006620 ORTHO05D008921 2.4e-222 775.4 429 84.6
C05p02810 Brassica napus HOM05D006620 ORTHO05D008921 7.1e-222 773.9 466 79.4
PSO832G4215 Papaver somniferum HOM05D006620 ORTHO05D008921 7.1e-222 773.9 433 84.5
Lsat_1_v5_gn_6_61660 Lactuca sativa HOM05D006620 ORTHO05D008921 1.6e-221 772.7 433 83.1
Potri.010G062300 Populus trichocarpa HOM05D006620 ORTHO05D008921 1.0e-220 770.0 424 85.1
AUR62043860 Chenopodium quinoa HOM05D006620 ORTHO05D008921 3.9e-220 768.1 456 81.1
HanXRQChr07g0185841 Helianthus annuus HOM05D006620 ORTHO05D008921 6.7e-220 767.3 433 82.4
ATR0787G041 Amborella trichopoda HOM05D006620 ORTHO05D008921 1.9e-219 765.8 455 80.2
CDE09G0604 Ceratophyllum demersum HOM05D006620 ORTHO05D008921 1.9e-219 765.8 416 85.8
ECA233G0386 Erigeron canadensis HOM05D006620 ORTHO05D008921 9.6e-219 763.5 415 85.1
Lj3A630T51 Lonicera japonica HOM05D006620 ORTHO05D008921 6.2e-218 760.8 435 83.9
Solyc09g091100.4 Solanum lycopersicum HOM05D006620 ORTHO05D008921 6.9e-217 757.3 382 96.9
Zm00001eb038650 Zea mays HOM05D006620 ORTHO05D008921 7.6e-216 753.8 423 83.5
Hund19263 Selenicereus undatus HOM05D006620 ORTHO05D008921 1.1e-214 750.0 425 84.2
Nitab4.5_0003287g0030 Nicotiana tabacum HOM05D006620 ORTHO05D008921 3.2e-214 748.4 491 78.0
HPP92_009009 Vanilla planifolia HOM05D006620 ORTHO05D008921 4.2e-214 748.0 447 79.4
COL.COLO4_34324 Corchorus olitorius HOM05D006620 ORTHO05D008921 9.3e-214 746.9 447 80.1
Ah.04g153440 Amaranthus hybridus HOM05D006620 ORTHO05D008921 6.0e-213 744.2 428 83.4
SEGI_36405 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 7.9e-213 743.8 429 80.7
MBI07_g21064_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D008921 1.1e-209 733.4 401 86.5
vmacro00524 Vaccinium macrocarpon HOM05D006620 ORTHO05D008921 4.2e-206 721.5 497 72.4
AagrBONN_evm.TU.Sc2ySwM_228.367 Anthoceros agrestis HOM05D006620 ORTHO05D008921 9.3e-206 720.3 421 80.3
AUR62035902 Chenopodium quinoa HOM05D006620 ORTHO05D008921 1.6e-205 719.5 430 80.9
FAN22G0814 Fragaria x ananassa HOM05D006620 ORTHO05D008921 7.9e-205 717.2 475 75.8
Pp3c2_21860 Physcomitrium patens HOM05D006620 ORTHO05D008921 7.9e-205 717.2 418 79.2
Mapoly0088s0008 Marchantia polymorpha HOM05D006620 ORTHO05D008921 9.7e-203 710.3 442 74.9
Rhsim09G0044600 Rhododendron simsii HOM05D006620 ORTHO05D008921 3.1e-201 705.3 454 76.7
Cfa014839 Carpinus fangiana HOM05D006620 ORTHO05D008921 1.1e-195 686.8 401 82.5
Sc25g0004890 Simmondsia chinensis HOM05D006620 ORTHO05D008921 3.3e-195 685.3 391 84.7
EL10Ac3g06742 Beta vulgaris HOM05D006620 ORTHO05D008921 3.8e-191 671.8 459 72.8
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 1.8e-188 662.9 543 63.5
Aa31LG1G20250 Aethionema arabicum HOM05D006620 ORTHO05D008921 5.7e-187 657.9 387 80.9
AUR62035337 Chenopodium quinoa HOM05D006620 ORTHO05D008921 4.5e-184 648.3 430 74.7
Glyma.20G079901 Glycine max HOM05D006620 ORTHO05D008921 3.8e-183 645.2 357 86.3
CBR_g51515 Chara braunii HOM05D006620 ORTHO05D008921 2.6e-179 632.5 421 70.3
MCO15G577 Micromonas commoda HOM05D006620 ORTHO05D008921 4.8e-170 601.7 457 63.5
Ca_11784_v3 Cicer arietinum L. HOM05D006620 ORTHO05D008921 6.3e-170 601.3 377 78.0
Cc03_g06790 Coffea canephora HOM05D006620 ORTHO05D008921 1.7e-167 593.2 492 65.9
Cre11.g468700 Chlamydomonas reinhardtii HOM05D006620 ORTHO05D008921 1.5e-166 590.1 423 65.5
Nitab4.5_0000451g0130 Nicotiana tabacum HOM05D006620 ORTHO05D008921 1.8e-156 556.6 461 65.1
Os04g0320100 Oryza sativa ssp. japonica HOM05D006620 ORTHO05D008921 2.3e-143 513.1 291 85.2
Psat6g109520 Pisum sativum HOM05D006620 ORTHO05D008921 1.2e-141 507.3 297 82.5
Haze_11525 Corylus avellana HOM05D006620 ORTHO05D008921 1.2e-139 500.7 270 87.0
PRCOL_00000047 Prasinoderma coloniale HOM05D006620 ORTHO05D008921 2.7e-136 489.6 374 62.0
Eucgr.H00112 Eucalyptus grandis HOM05D006620 ORTHO05D008921 4.0e-116 422.5 259 79.5
PGSC0003DMG401011586 Solanum tuberosum HOM05D006620 ORTHO05D008921 1.3e-77 294.7 147 97.3
SEGI_09547 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 3.3e-62 243.4 147 76.2
Prupe.1G054400 Prunus persica HOM05D006620 ORTHO05D008921 5.7e-62 242.7 190 65.8
Hma1.2p1_1241F.1_g269765 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 1.1e-41 175.3 100 78.0
SEGI_19589 Sequoiadendron giganteum HOM05D006620 ORTHO05D025789 7.8e-27 125.9 79 72.2
Actinidia35928 Actinidia chinensis HOM05D006620 ORTHO05D000073 5.6e-25 119.8 70 81.4
Ca_17765_v3 Cicer arietinum L. HOM05D006620 ORTHO05D044367 2.7e-19 100.9 57 80.7
COL.COLO4_07239 Corchorus olitorius HOM05D006620 ORTHO05D044367 9.5e-17 92.4 49 89.8
MBI11_g39495_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 2.1e-11 74.7 49 73.5
MBI15_g44046_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 7.8e-11 72.8 42 81.0
MBI12_g00604_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 1.3e-10 72.0 42 78.6
MELO3C028457.2 Cucumis melo HOM05D006620 ORTHO05D167913 4.7e-08 63.5 40 77.5


User provided reference genes

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